miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 149 bits (75), Expect = 2e-35
Identities = 113/126 (89%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
||||||| ||||||||||||| ||||||||||||| |||||||| || | |||||||||
Sbjct: 129 ctccctccgtcccaaaattctngtcttagatttgtttagatatgaatgtgtctaacacta 70
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
|||| | |||| ||||||||||||||||||||||||| |||||||||||| |||| ||||
Sbjct: 69 aaacatgactagatacatccgtatttagacaaatctatgacaagaattttgggacggagg 10
Query: 176 gagtat 181
||||||
Sbjct: 9 gagtat 4
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||||| ||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 7 ctccctccgtcccaaaattcttgtcatagatttgtctaaatacggat 53
Score = 46.1 bits (23), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 144 acaaatctaggacaagaattttaggacagagggagtat 181
||||||||| ||| |||||||| |||| ||||||||||
Sbjct: 95 acaaatctaagacnagaattttgggacggagggagtat 132
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 147 bits (74), Expect = 8e-35
Identities = 113/126 (89%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 129 ctccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtatctaatacta 70
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
|||||| | | |||||||| |||||||| ||||||| |||||||||||| ||||||| |
Sbjct: 69 aaacgtgagttgatacatccctatttagaaaaatctaagacaagaattttgggacagaag 10
Query: 176 gagtat 181
||||||
Sbjct: 9 gagtat 4
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 128 atacatccgtatttagacaaatctaggacaagaattttaggacagagggagtat 181
|||||||| ||| |||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 79 atacatccatatctagacaaatctaagacaagaattttgggacggagggagtat 132
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
|||| |||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 7 ctccttctgtcccaaaattcttgtcttagatttttctaaatagggat 53
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 139 bits (70), Expect = 2e-32
Identities = 103/114 (90%)
Strand = Plus / Minus
Query: 67 ccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaacgtaacta 126
||||||||||||||||||||||| ||||||| |||| || |||| |||||||||| |||
Sbjct: 118 ccaaaattcttgtcttagatttgcctagatacggatgtatctaatactaaaacgtgactt 59
Query: 127 aatacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
||||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 58 gatacatccgtatttagacaaatctaagacaagaattttgggacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 7 ctccctccgtcccaaaattcttgtcttagatttgtctaaatacggat 53
Score = 54.0 bits (27), Expect = 9e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 128 atacatccgtatttagacaaatctaggacaagaattttaggacagagggagtata 182
|||||||||||| ||| |||||||| |||||||||||| | || |||| ||||||
Sbjct: 79 atacatccgtatctaggcaaatctaagacaagaattttggaacggaggaagtata 133
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 129 bits (65), Expect = 2e-29
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
|||||||||||||||| ||||||||||||||||||||||||| ||| || |||| || |
Sbjct: 129 ctccctctgtcccaaatttcttgtcttagatttgtctagatacagatgtatctaatacga 70
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
||| || ||| |||||||||||| |||||||||||| |||||||||||| |||| ||||
Sbjct: 69 aaatgtgacttgatacatccgtatctagacaaatctaagacaagaattttgggaccgagg 10
Query: 176 gagta 180
|||||
Sbjct: 9 gagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 7 ctccctcggtcccaaaattcttgtcttagatttgtctagatacggat 53
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 127 bits (64), Expect = 7e-29
Identities = 100/112 (89%)
Strand = Plus / Plus
Query: 65 tcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaacgtaac 124
||||||||||||||||||| |||||| |||||| ||| || |||||||||||| |||||
Sbjct: 16 tcccaaaattcttgtcttacatttgtttagataaagatgtatctaacactaaaatgtaac 75
Query: 125 taaatacatccgtatttagacaaatctaggacaagaattttaggacagaggg 176
|| |||||||||||||||||||||| || |||||||||||| |||| |||||
Sbjct: 76 tagatacatccgtatttagacaaatttaagacaagaattttgggacggaggg 127
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 58 ccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||| |||||||||||||||||||| ||||||||| ||| ||||
Sbjct: 127 ccctccgtcccaaaattcttgtcttaaatttgtctaaatacggat 83
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 127 bits (64), Expect = 7e-29
Identities = 103/116 (88%)
Strand = Plus / Minus
Query: 65 tcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaacgtaac 124
||||||||||||||||||| |||||| |||||| |||| || |||||||||||| |||||
Sbjct: 120 tcccaaaattcttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaac 61
Query: 125 taaatacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
|| |||||||| ||||||||||||| || ||||| |||||| |||| |||||||||
Sbjct: 60 tacatacatccatatttagacaaatttaagacaacaattttgggacggagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||||| ||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 7 ctccctccgtcccaaaattgttgtcttaaatttgtctaaatatggat 53
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 128 atacatccgtatttagacaaatctaggacaagaatttt 165
|||||||||||| || |||||| || ||||||||||||
Sbjct: 79 atacatccgtatctaaacaaatgtaagacaagaatttt 116
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 103 bits (52), Expect = 1e-21
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 59 cctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaa 118
|||| |||||||||||||||||| ||||| |||||||| |||| || ||||||||||||
Sbjct: 126 cctccgtcccaaaattcttgtctaggatttatctagatacggatgtatctaacactaaaa 67
Query: 119 cgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagggag 178
||| |||| |||||||| |||||||| |||| || ||| |||||||| || |||||||
Sbjct: 66 cgtgactagatacatccatatttagagaaatttaagaccagaattttgagatggagggag 7
Query: 179 tata 182
||||
Sbjct: 6 tata 3
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 97.6 bits (49), Expect = 7e-20
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
||||||| ||| |||||||||||||||| ||||||||||||| || || ||| ||||
Sbjct: 7 ctccctccgtctcaaaattcttgtcttacatttgtctagatacatatgtatttaatacta 66
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
||| | ||| ||||||||||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 67 aaatatgacttcatacatccgtatttagacaaatctaagacaagaattttgggatggagg 126
Query: 176 gagta 180
|||||
Sbjct: 127 gagta 131
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||||| ||||||||||||||||||||||||||||| ||| ||||
Sbjct: 129 ctccctccatcccaaaattcttgtcttagatttgtctaaatacggat 83
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 125 taaatacatccgtatttagacaaatctaggacaagaattttaggacagagggagtat 181
||||||||| |||| ||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 60 taaatacatatgtatctagacaaatgtaagacaagaattttgagacggagggagtat 4
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 97.6 bits (49), Expect = 7e-20
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
||||||| |||||||||||||||| ||| |||||||||||| |||| || |||| || |
Sbjct: 129 ctccctccgtcccaaaattcttgttgtagctttgtctagatacggatgtatctaatacaa 70
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
|||||| ||| |||||| ||| ||||||||||| || ||||||||||| ||||| |||
Sbjct: 69 aaacgtgacttgatacattcgtctttagacaaatttaagacaagaatttcaggacggagc 10
Query: 176 gagta 180
|||||
Sbjct: 9 gagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 128 atacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
|||||||||||| |||||||| ||| ||||||||||| |||| |||||||||
Sbjct: 79 atacatccgtatctagacaaagctacaacaagaattttgggacggagggagta 131
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 95.6 bits (48), Expect = 3e-19
Identities = 109/128 (85%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaac-act 114
||||||| |||| |||||||||||||||| |||||||||| || ||| || |||| |||
Sbjct: 130 ctccctccgtcctaaaattcttgtcttagctttgtctagaaattgatgtatctaaatact 71
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
||||| |||||| |||||| | ||| || ||||||||| |||||||||||| | || |||
Sbjct: 70 aaaacttaactagatacattcatatctaaacaaatctaagacaagaattttggaacggag 11
Query: 175 ggagtata 182
||||||||
Sbjct: 10 ggagtata 3
Score = 63.9 bits (32), Expect = 9e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
||||||| || |||||||||||||||||||||||| ||||||||
Sbjct: 7 ctccctccgttccaaaattcttgtcttagatttgtttagatatg 50
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtat 181
|||||||| ||| ||||||||||||||||| ||||||||||
Sbjct: 93 tagacaaagctaagacaagaattttaggacggagggagtat 133
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 93.7 bits (47), Expect = 1e-18
Identities = 100/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 64 gtcccaaaattcttgtcttagatttgtctagatatggatatacctaac-actaaaacgta 122
|||||||||||||||||||| ||| ||||||| |||||| || |||| |||||||| |
Sbjct: 121 gtcccaaaattcttgtcttaaatt-gtctagaaatggatgtatctaaatactaaaacatg 63
Query: 123 actaaatacatccgtatttagacaaatctaggacaagaattttaggacagaggga 177
|||| |||||| | |||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 62 actagatacattcatatttagacaaatctaagacaagaattttgggacaaaggga 8
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 57 tccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 8 tccctttgtcccaaaattcttgtcttagatttgtctaaatatg 50
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 87.7 bits (44), Expect = 6e-17
Identities = 108/128 (84%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct-aacact 114
||||||| |||| |||||||||||||||| |||||||||| || ||| || || || |||
Sbjct: 7 ctccctccgtcctaaaattcttgtcttagctttgtctagaaattgatgtatctaaatact 66
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
||||| |||||| |||||| | ||| || ||||||||| |||||||||||| | || |||
Sbjct: 67 aaaacttaactagatacattcatatctaaacaaatctaagacaagaattttggaacggag 126
Query: 175 ggagtata 182
| ||||||
Sbjct: 127 gtagtata 134
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtat 181
|||||||| ||| ||||||||||||||||| ||||||||||
Sbjct: 44 tagacaaagctaagacaagaattttaggacggagggagtat 4
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 67 ccaaaattcttgtcttagatttgtctagatatg 99
|||||||||||||||||||||||| ||||||||
Sbjct: 119 ccaaaattcttgtcttagatttgtttagatatg 87
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 83.8 bits (42), Expect = 1e-15
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaac-act 114
||||||| |||||||||||||||||||| ||||| |||| || ||| || | || |||
Sbjct: 130 ctccctccgtcccaaaattcttgtcttaagtttgtttagaaatagatgtatcaaaatact 71
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
||||||| |||| |||||| | ||| ||||||||| || |||||||||||| |||| |||
Sbjct: 70 aaaacgtgactagatacattcatatctagacaaatgtaagacaagaattttgggacggag 11
Query: 175 ggagta 180
||||||
Sbjct: 10 ggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 7 ctccctccgtcccaaaattcttgtcttacatttgtctagatatg 50
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 75 cttgtcttagatttgtctagatatggatatacctaacactaaaacgtaactaaatacatc 134
||||||||||||||||||||||| ||| ||| ||| |||||||| | ||| |||||||
Sbjct: 26 cttgtcttagatttgtctagatacggagatatctagcactaaaatgagtctagatacatc 85
Query: 135 cgtatttagacaaatctaggacaagaattttaggacagagggagta 180
||||| |||||||||| | |||||| | ||| | || |||||||||
Sbjct: 86 cgtatctagacaaatccaagacaagtaatttggaacggagggagta 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||||| || ||||| | |||||||| |||||||||||||| ||||
Sbjct: 129 ctccctccgttccaaattacttgtcttggatttgtctagatacggat 83
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatat 104
||||||| |||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 7 ctccctccgtcctaaaattcttgtcttagatttgtctagatatgaatat 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtat 181
|||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 44 tagacaaatctaagacaagaattttaggacggagggagtat 4
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 136
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7 ctccctctgtcataaaattcttgtcttagatttgtctagatatg 50
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
||||||| | || |||||| | ||| |||||||||||| ||||||||||||| |||||||
Sbjct: 70 aaaacgtgattagatacattcatatctagacaaatctaagacaagaattttatgacagag 11
Query: 175 ggagtat 181
|||||||
Sbjct: 10 ggagtat 4
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaacttcttgtcttagatttgtctagatatg 50
Score = 69.9 bits (35), Expect = 2e-11
Identities = 108/133 (81%), Gaps = 7/133 (5%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct------- 108
||||||| ||||||||||||||||||||| |||||||| | |||||| || |
Sbjct: 136 ctccctccgtcccaaaattcttgtcttaggtttgtctataaatggatgtaggtgtatcta 77
Query: 109 aacactaaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttagg 168
|| || ||||||| |||| |||||| | ||| |||||||||||| |||||||| ||| ||
Sbjct: 76 aataccaaaacgtgactacatacattcatatctagacaaatctaagacaagaagtttggg 17
Query: 169 acagagggagtat 181
|| ||||||||||
Sbjct: 16 acggagggagtat 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtata 182
|||||||| ||| |||||||||||| |||| |||||||||||
Sbjct: 99 tagacaaacctaagacaagaattttgggacggagggagtata 140
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 69.9 bits (35), Expect = 2e-11
Identities = 81/95 (85%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct-aacact 114
||||||| ||||||||||||||||||||||| | | ||||||||||| | | || |||
Sbjct: 130 ctccctccgtcccaaaattcttgtcttagatgtttttagatatggatgcatttaaatact 71
Query: 115 aaaacgtaactaaatacatccgtatttagacaaat 149
|||| ||||||| |||||||| ||| |||||||||
Sbjct: 70 aaaatgtaactagatacatccatatctagacaaat 36
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
||||||| ||| ||||||| |||| || ||||||||||||||||||
Sbjct: 7 ctccctccgtctcaaaattattgttttgaatttgtctagatatggat 53
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 148 atctaggacaagaattttaggacagagggagtat 181
||||| |||||||||||| |||| ||||||||||
Sbjct: 100 atctaagacaagaattttgggacggagggagtat 133
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 67.9 bits (34), Expect = 6e-11
Identities = 104/126 (82%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct-aacact 114
||||||| || |||||||||||||||||| ||||||| | |||||| || || || |||
Sbjct: 130 ctccctccgttccaaaattcttgtcttagcattgtctacacatggatgtatctaaatact 71
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
||| | | |||| |||||| | ||| ||||||||| || |||||||||||| |||| ||
Sbjct: 70 aaaccatgactagatacattcatatatagacaaatttaagacaagaattttgggacggaa 11
Query: 175 ggagta 180
||||||
Sbjct: 10 ggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 64 gtcccaaaattcttgtcttagatttgtctagatatg 99
|||||||||||||||||||| ||||||||| |||||
Sbjct: 15 gtcccaaaattcttgtcttaaatttgtctatatatg 50
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 67.9 bits (34), Expect = 6e-11
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 64 gtcccaaaattcttgtcttagatttgtctagatatggatatacctaa-cactaaaacgta 122
|||||||||||||||||||| ||||| |||| || ||| || |||| |||||||| |
Sbjct: 122 gtcccaaaattcttgtcttaactttgtttagaaatagatgtatctaattactaaaacttg 63
Query: 123 actaaatacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
|||| |||||| | ||| || ||||||||| ||||| |||||| |||| |||||||||
Sbjct: 62 actagatacattcatatctaaacaaatctaagacaataattttgggacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct: 7 ctccctccgtcccaaaattattgtcttagatttgtttagatatg 50
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 65.9 bits (33), Expect = 2e-10
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
||||||| || ||||| | |||||||| |||||||||||||| ||||| ||| |||||
Sbjct: 129 ctccctccgttccaaattacttgtcttcgatttgtctagatacagatatgtctagcacta 70
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
||| | ||| |||||||||||| ||||||||| || |||||| | || || || ||||
Sbjct: 69 aaatgagtctagatacatccgtatctagacaaatttaagacaagtaattcagaacggagg 10
Query: 176 gagta 180
|||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 59 cctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaa 117
|||| ||||||||| |||||||||||||| |||||||| |||| || |||||||||||
Sbjct: 95 cctccgtcccaaaaagcttgtcttagatttatctagatacggatgtatctaacactaaa 37
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagata 97
||||||| ||||||||||||||||||||||||| | ||||||
Sbjct: 99 ctccctccgtcccaaaattcttgtcttagatttatttagata 58
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 67 ccaaaattcttgtcttagatttgtctagatatggat 102
|||||||||||||||||||||| |||||||| ||||
Sbjct: 17 ccaaaattcttgtcttagatttatctagatacggat 52
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 130 acatccgtatttagacaaatctaggacaagaatttt 165
|||||||||| |||| ||||||| ||||||||||||
Sbjct: 54 acatccgtatctagataaatctaagacaagaatttt 19
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 133 tccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
||||||| || | ||||||| |||||||||||| |||| |||||||||
Sbjct: 54 tccgtatctaaataaatctaagacaagaattttgggacggagggagta 101
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 69 aaaattcttgtcttagatttgtctagata 97
|||||||||||||||||||||||||||||
Sbjct: 82 aaaattcttgtcttagatttgtctagata 54
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 67 ccaaaattcttgtcttagatttgtctagata 97
|||||||||||||||||||||||||| ||||
Sbjct: 18 ccaaaattcttgtcttagatttgtcttgata 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 136 gtatttagacaaatctaggacaagaattttaggacagagggagta 180
|||| |||||||||||| ||||||||||||| || |||||||||
Sbjct: 53 gtatctagacaaatctaagacaagaattttaagatggagggagta 97
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 67 ccaaaattcttgtcttagatttgtctaga 95
|||||||||||||||||| ||||||||||
Sbjct: 118 ccaaaattcttgtcttagctttgtctaga 90
Score = 44.1 bits (22), Expect = 9e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagata 97
||||||| ||| ||||||||||| |||| |||||| ||||||
Sbjct: 7 ctccctccgtctcaaaattcttgccttatatttgtttagata 48
