miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
          Length = 135

 Score =  149 bits (75), Expect = 2e-35
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           ||||||| ||||||||||||| ||||||||||||| |||||||| || |  |||||||||
Sbjct: 129 ctccctccgtcccaaaattctngtcttagatttgtttagatatgaatgtgtctaacacta 70

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           |||| | |||| ||||||||||||||||||||||||| |||||||||||| |||| ||||
Sbjct: 69  aaacatgactagatacatccgtatttagacaaatctatgacaagaattttgggacggagg 10

                 
Query: 176 gagtat 181
           ||||||
Sbjct: 9   gagtat 4



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| ||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 7   ctccctccgtcccaaaattcttgtcatagatttgtctaaatacggat 53



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 144 acaaatctaggacaagaattttaggacagagggagtat 181
           ||||||||| ||| |||||||| |||| ||||||||||
Sbjct: 95  acaaatctaagacnagaattttgggacggagggagtat 132




>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
          Length = 135

 Score =  147 bits (74), Expect = 8e-35
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           ||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 129 ctccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtatctaatacta 70

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           |||||| | |  |||||||| |||||||| ||||||| |||||||||||| ||||||| |
Sbjct: 69  aaacgtgagttgatacatccctatttagaaaaatctaagacaagaattttgggacagaag 10

                 
Query: 176 gagtat 181
           ||||||
Sbjct: 9   gagtat 4



 Score = 67.9 bits (34), Expect = 6e-11
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 128 atacatccgtatttagacaaatctaggacaagaattttaggacagagggagtat 181
           |||||||| ||| |||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 79  atacatccatatctagacaaatctaagacaagaattttgggacggagggagtat 132



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           |||| |||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 7   ctccttctgtcccaaaattcttgtcttagatttttctaaatagggat 53




>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
          Length = 135

 Score =  139 bits (70), Expect = 2e-32
 Identities = 103/114 (90%)
 Strand = Plus / Minus

                                                                       
Query: 67  ccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaacgtaacta 126
           ||||||||||||||||||||||| ||||||| |||| || |||| |||||||||| ||| 
Sbjct: 118 ccaaaattcttgtcttagatttgcctagatacggatgtatctaatactaaaacgtgactt 59

                                                                 
Query: 127 aatacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
            ||||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 58  gatacatccgtatttagacaaatctaagacaagaattttgggacggagggagta 5



 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 7   ctccctccgtcccaaaattcttgtcttagatttgtctaaatacggat 53



 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 128 atacatccgtatttagacaaatctaggacaagaattttaggacagagggagtata 182
           |||||||||||| ||| |||||||| |||||||||||| | || |||| ||||||
Sbjct: 79  atacatccgtatctaggcaaatctaagacaagaattttggaacggaggaagtata 133




>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
           (bread wheat)
          Length = 135

 Score =  129 bits (65), Expect = 2e-29
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           |||||||||||||||| |||||||||||||||||||||||||  ||| || |||| || |
Sbjct: 129 ctccctctgtcccaaatttcttgtcttagatttgtctagatacagatgtatctaatacga 70

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           ||| || |||  |||||||||||| |||||||||||| |||||||||||| |||| ||||
Sbjct: 69  aaatgtgacttgatacatccgtatctagacaaatctaagacaagaattttgggaccgagg 10

                
Query: 176 gagta 180
           |||||
Sbjct: 9   gagta 5



 Score = 77.8 bits (39), Expect = 6e-14
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 7   ctccctcggtcccaaaattcttgtcttagatttgtctagatacggat 53




>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
          Length = 135

 Score =  127 bits (64), Expect = 7e-29
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                       
Query: 65  tcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaacgtaac 124
           ||||||||||||||||||| |||||| ||||||  ||| || |||||||||||| |||||
Sbjct: 16  tcccaaaattcttgtcttacatttgtttagataaagatgtatctaacactaaaatgtaac 75

                                                               
Query: 125 taaatacatccgtatttagacaaatctaggacaagaattttaggacagaggg 176
           || |||||||||||||||||||||| || |||||||||||| |||| |||||
Sbjct: 76  tagatacatccgtatttagacaaatttaagacaagaattttgggacggaggg 127



 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 58  ccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||| |||||||||||||||||||| ||||||||| ||| ||||
Sbjct: 127 ccctccgtcccaaaattcttgtcttaaatttgtctaaatacggat 83




>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
          Length = 135

 Score =  127 bits (64), Expect = 7e-29
 Identities = 103/116 (88%)
 Strand = Plus / Minus

                                                                       
Query: 65  tcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaacgtaac 124
           ||||||||||||||||||| |||||| |||||| |||| || |||||||||||| |||||
Sbjct: 120 tcccaaaattcttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaac 61

                                                                   
Query: 125 taaatacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
           || |||||||| ||||||||||||| || ||||| |||||| |||| |||||||||
Sbjct: 60  tacatacatccatatttagacaaatttaagacaacaattttgggacggagggagta 5



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| ||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 7   ctccctccgtcccaaaattgttgtcttaaatttgtctaaatatggat 53



 Score = 44.1 bits (22), Expect = 9e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 128 atacatccgtatttagacaaatctaggacaagaatttt 165
           |||||||||||| || |||||| || ||||||||||||
Sbjct: 79  atacatccgtatctaaacaaatgtaagacaagaatttt 116




>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
          Length = 135

 Score =  103 bits (52), Expect = 1e-21
 Identities = 106/124 (85%)
 Strand = Plus / Minus

                                                                       
Query: 59  cctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaa 118
           |||| ||||||||||||||||||  ||||| |||||||| |||| || ||||||||||||
Sbjct: 126 cctccgtcccaaaattcttgtctaggatttatctagatacggatgtatctaacactaaaa 67

                                                                       
Query: 119 cgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagggag 178
           ||| |||| |||||||| |||||||| |||| || ||| ||||||||  ||  |||||||
Sbjct: 66  cgtgactagatacatccatatttagagaaatttaagaccagaattttgagatggagggag 7

               
Query: 179 tata 182
           ||||
Sbjct: 6   tata 3




>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
           (bread wheat)
          Length = 135

 Score = 97.6 bits (49), Expect = 7e-20
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           ||||||| ||| |||||||||||||||| |||||||||||||   || ||  ||| ||||
Sbjct: 7   ctccctccgtctcaaaattcttgtcttacatttgtctagatacatatgtatttaatacta 66

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           |||  | |||  ||||||||||||||||||||||||| |||||||||||| |||  ||||
Sbjct: 67  aaatatgacttcatacatccgtatttagacaaatctaagacaagaattttgggatggagg 126

                
Query: 176 gagta 180
           |||||
Sbjct: 127 gagta 131



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           |||||||  ||||||||||||||||||||||||||||| ||| ||||
Sbjct: 129 ctccctccatcccaaaattcttgtcttagatttgtctaaatacggat 83



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 125 taaatacatccgtatttagacaaatctaggacaagaattttaggacagagggagtat 181
           |||||||||  |||| ||||||||| || ||||||||||||  ||| ||||||||||
Sbjct: 60  taaatacatatgtatctagacaaatgtaagacaagaattttgagacggagggagtat 4




>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
           (bread wheat)
          Length = 135

 Score = 97.6 bits (49), Expect = 7e-20
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           ||||||| ||||||||||||||||  ||| |||||||||||| |||| || |||| || |
Sbjct: 129 ctccctccgtcccaaaattcttgttgtagctttgtctagatacggatgtatctaatacaa 70

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           |||||| |||  |||||| ||| ||||||||||| || ||||||||||| ||||| ||| 
Sbjct: 69  aaacgtgacttgatacattcgtctttagacaaatttaagacaagaatttcaggacggagc 10

                
Query: 176 gagta 180
           |||||
Sbjct: 9   gagta 5



 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 128 atacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
           |||||||||||| |||||||| |||  ||||||||||| |||| |||||||||
Sbjct: 79  atacatccgtatctagacaaagctacaacaagaattttgggacggagggagta 131




>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
           spontaneum
          Length = 136

 Score = 95.6 bits (48), Expect = 3e-19
 Identities = 109/128 (85%), Gaps = 1/128 (0%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaac-act 114
           ||||||| |||| |||||||||||||||| |||||||||| || ||| || ||||  |||
Sbjct: 130 ctccctccgtcctaaaattcttgtcttagctttgtctagaaattgatgtatctaaatact 71

                                                                       
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
           ||||| |||||| |||||| | ||| || ||||||||| |||||||||||| | || |||
Sbjct: 70  aaaacttaactagatacattcatatctaaacaaatctaagacaagaattttggaacggag 11

                   
Query: 175 ggagtata 182
           ||||||||
Sbjct: 10  ggagtata 3



 Score = 63.9 bits (32), Expect = 9e-10
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                      
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
          ||||||| || |||||||||||||||||||||||| ||||||||
Sbjct: 7  ctccctccgttccaaaattcttgtcttagatttgtttagatatg 50



 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtat 181
           |||||||| ||| ||||||||||||||||| ||||||||||
Sbjct: 93  tagacaaagctaagacaagaattttaggacggagggagtat 133




>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 135

 Score = 93.7 bits (47), Expect = 1e-18
 Identities = 100/115 (86%), Gaps = 2/115 (1%)
 Strand = Plus / Minus

                                                                       
Query: 64  gtcccaaaattcttgtcttagatttgtctagatatggatatacctaac-actaaaacgta 122
           |||||||||||||||||||| ||| ||||||| |||||| || ||||  |||||||| | 
Sbjct: 121 gtcccaaaattcttgtcttaaatt-gtctagaaatggatgtatctaaatactaaaacatg 63

                                                                  
Query: 123 actaaatacatccgtatttagacaaatctaggacaagaattttaggacagaggga 177
           |||| |||||| | |||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 62  actagatacattcatatttagacaaatctaagacaagaattttgggacaaaggga 8



 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                     
Query: 57 tccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
          ||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 8  tccctttgtcccaaaattcttgtcttagatttgtctaaatatg 50




>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
          Length = 136

 Score = 87.7 bits (44), Expect = 6e-17
 Identities = 108/128 (84%), Gaps = 1/128 (0%)
 Strand = Plus / Plus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct-aacact 114
           ||||||| |||| |||||||||||||||| |||||||||| || ||| || || || |||
Sbjct: 7   ctccctccgtcctaaaattcttgtcttagctttgtctagaaattgatgtatctaaatact 66

                                                                       
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
           ||||| |||||| |||||| | ||| || ||||||||| |||||||||||| | || |||
Sbjct: 67  aaaacttaactagatacattcatatctaaacaaatctaagacaagaattttggaacggag 126

                   
Query: 175 ggagtata 182
           | ||||||
Sbjct: 127 gtagtata 134



 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtat 181
           |||||||| ||| ||||||||||||||||| ||||||||||
Sbjct: 44  tagacaaagctaagacaagaattttaggacggagggagtat 4



 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 67  ccaaaattcttgtcttagatttgtctagatatg 99
           |||||||||||||||||||||||| ||||||||
Sbjct: 119 ccaaaattcttgtcttagatttgtttagatatg 87




>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
          Length = 136

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 106/126 (84%), Gaps = 1/126 (0%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaac-act 114
           ||||||| ||||||||||||||||||||  ||||| |||| || ||| || | ||  |||
Sbjct: 130 ctccctccgtcccaaaattcttgtcttaagtttgtttagaaatagatgtatcaaaatact 71

                                                                       
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
           ||||||| |||| |||||| | ||| ||||||||| || |||||||||||| |||| |||
Sbjct: 70  aaaacgtgactagatacattcatatctagacaaatgtaagacaagaattttgggacggag 11

                 
Query: 175 ggagta 180
           ||||||
Sbjct: 10  ggagta 5



 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
          ||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 7  ctccctccgtcccaaaattcttgtcttacatttgtctagatatg 50




>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
          Length = 135

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                       
Query: 75  cttgtcttagatttgtctagatatggatatacctaacactaaaacgtaactaaatacatc 134
           ||||||||||||||||||||||| ||| ||| ||| |||||||| |   ||| |||||||
Sbjct: 26  cttgtcttagatttgtctagatacggagatatctagcactaaaatgagtctagatacatc 85

                                                         
Query: 135 cgtatttagacaaatctaggacaagaattttaggacagagggagta 180
           ||||| |||||||||| | |||||| | ||| | || |||||||||
Sbjct: 86  cgtatctagacaaatccaagacaagtaatttggaacggagggagta 131



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| || ||||| | |||||||| |||||||||||||| ||||
Sbjct: 129 ctccctccgttccaaattacttgtcttggatttgtctagatacggat 83




>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
          Length = 123

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatat 104
           ||||||| |||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 7   ctccctccgtcctaaaattcttgtcttagatttgtctagatatgaatat 55



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtat 181
           |||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 44  tagacaaatctaagacaagaattttaggacggagggagtat 4




>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 136

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
          |||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 7  ctccctctgtcataaaattcttgtcttagatttgtctagatatg 50



 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
           ||||||| | || |||||| | ||| |||||||||||| ||||||||||||| |||||||
Sbjct: 70  aaaacgtgattagatacattcatatctagacaaatctaagacaagaattttatgacagag 11

                  
Query: 175 ggagtat 181
           |||||||
Sbjct: 10  ggagtat 4




>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 142

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
          ||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 7  ctccctccgtcccaaacttcttgtcttagatttgtctagatatg 50



 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 108/133 (81%), Gaps = 7/133 (5%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct------- 108
           ||||||| ||||||||||||||||||||| |||||||| | |||||| ||  |       
Sbjct: 136 ctccctccgtcccaaaattcttgtcttaggtttgtctataaatggatgtaggtgtatcta 77

                                                                       
Query: 109 aacactaaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttagg 168
           || || ||||||| |||| |||||| | ||| |||||||||||| |||||||| ||| ||
Sbjct: 76  aataccaaaacgtgactacatacattcatatctagacaaatctaagacaagaagtttggg 17

                        
Query: 169 acagagggagtat 181
           || ||||||||||
Sbjct: 16  acggagggagtat 4



 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 141 tagacaaatctaggacaagaattttaggacagagggagtata 182
           |||||||| ||| |||||||||||| |||| |||||||||||
Sbjct: 99  tagacaaacctaagacaagaattttgggacggagggagtata 140




>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 136

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 81/95 (85%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct-aacact 114
           ||||||| ||||||||||||||||||||||| | | |||||||||||  |  | || |||
Sbjct: 130 ctccctccgtcccaaaattcttgtcttagatgtttttagatatggatgcatttaaatact 71

                                              
Query: 115 aaaacgtaactaaatacatccgtatttagacaaat 149
           |||| ||||||| |||||||| ||| |||||||||
Sbjct: 70  aaaatgtaactagatacatccatatctagacaaat 36



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| ||| ||||||| |||| ||  ||||||||||||||||||
Sbjct: 7   ctccctccgtctcaaaattattgttttgaatttgtctagatatggat 53



 Score = 44.1 bits (22), Expect = 9e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 148 atctaggacaagaattttaggacagagggagtat 181
           ||||| |||||||||||| |||| ||||||||||
Sbjct: 100 atctaagacaagaattttgggacggagggagtat 133




>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
          Length = 136

 Score = 67.9 bits (34), Expect = 6e-11
 Identities = 104/126 (82%), Gaps = 1/126 (0%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacct-aacact 114
           ||||||| || ||||||||||||||||||  ||||||| | |||||| || || || |||
Sbjct: 130 ctccctccgttccaaaattcttgtcttagcattgtctacacatggatgtatctaaatact 71

                                                                       
Query: 115 aaaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagag 174
           ||| | | |||| |||||| | ||| ||||||||| || |||||||||||| |||| || 
Sbjct: 70  aaaccatgactagatacattcatatatagacaaatttaagacaagaattttgggacggaa 11

                 
Query: 175 ggagta 180
           ||||||
Sbjct: 10  ggagta 5



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 64 gtcccaaaattcttgtcttagatttgtctagatatg 99
          |||||||||||||||||||| ||||||||| |||||
Sbjct: 15 gtcccaaaattcttgtcttaaatttgtctatatatg 50




>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
          Length = 136

 Score = 67.9 bits (34), Expect = 6e-11
 Identities = 98/118 (83%), Gaps = 1/118 (0%)
 Strand = Plus / Minus

                                                                       
Query: 64  gtcccaaaattcttgtcttagatttgtctagatatggatatacctaa-cactaaaacgta 122
           ||||||||||||||||||||  ||||| |||| || ||| || ||||  |||||||| | 
Sbjct: 122 gtcccaaaattcttgtcttaactttgtttagaaatagatgtatctaattactaaaacttg 63

                                                                     
Query: 123 actaaatacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
           |||| |||||| | ||| || ||||||||| ||||| |||||| |||| |||||||||
Sbjct: 62  actagatacattcatatctaaacaaatctaagacaataattttgggacggagggagta 5



 Score = 63.9 bits (32), Expect = 9e-10
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                      
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagatatg 99
          ||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct: 7  ctccctccgtcccaaaattattgtcttagatttgtttagatatg 50




>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
          Length = 135

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           ||||||| || ||||| | |||||||| ||||||||||||||  |||||  ||| |||||
Sbjct: 129 ctccctccgttccaaattacttgtcttcgatttgtctagatacagatatgtctagcacta 70

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           ||| |   ||| |||||||||||| ||||||||| || |||||| | || || || ||||
Sbjct: 69  aaatgagtctagatacatccgtatctagacaaatttaagacaagtaattcagaacggagg 10

                
Query: 176 gagta 180
           |||||
Sbjct: 9   gagta 5




>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
          Length = 104

 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 59  cctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaa 117
           |||| |||||||||  |||||||||||||| |||||||| |||| || |||||||||||
Sbjct: 95  cctccgtcccaaaaagcttgtcttagatttatctagatacggatgtatctaacactaaa 37




>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
          Length = 105

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                    
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagata 97
          ||||||| ||||||||||||||||||||||||| | ||||||
Sbjct: 99 ctccctccgtcccaaaattcttgtcttagatttatttagata 58



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 67  ccaaaattcttgtcttagatttgtctagatatggat 102
           |||||||||||||||||||||| |||||||| ||||
Sbjct: 17  ccaaaattcttgtcttagatttatctagatacggat 52



 Score = 48.1 bits (24), Expect = 6e-05
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 130 acatccgtatttagacaaatctaggacaagaatttt 165
           |||||||||| |||| ||||||| ||||||||||||
Sbjct: 54  acatccgtatctagataaatctaagacaagaatttt 19



 Score = 48.1 bits (24), Expect = 6e-05
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 133 tccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
           ||||||| || | ||||||| |||||||||||| |||| |||||||||
Sbjct: 54  tccgtatctaaataaatctaagacaagaattttgggacggagggagta 101




>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
          wheat)
          Length = 101

 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                       
Query: 69 aaaattcttgtcttagatttgtctagata 97
          |||||||||||||||||||||||||||||
Sbjct: 82 aaaattcttgtcttagatttgtctagata 54



 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 67 ccaaaattcttgtcttagatttgtctagata 97
          |||||||||||||||||||||||||| ||||
Sbjct: 18 ccaaaattcttgtcttagatttgtcttgata 48



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 136 gtatttagacaaatctaggacaagaattttaggacagagggagta 180
           |||| |||||||||||| ||||||||||||| ||  |||||||||
Sbjct: 53  gtatctagacaaatctaagacaagaattttaagatggagggagta 97




>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
          Length = 135

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 67  ccaaaattcttgtcttagatttgtctaga 95
           |||||||||||||||||| ||||||||||
Sbjct: 118 ccaaaattcttgtcttagctttgtctaga 90



 Score = 44.1 bits (22), Expect = 9e-04
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtctagata 97
          ||||||| ||| ||||||||||| |||| |||||| ||||||
Sbjct: 7  ctccctccgtctcaaaattcttgccttatatttgtttagata 48