miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25655_xla-mir-15c:mirbase
Length = 74
Score = 147 bits (74), Expect = 2e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 9 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 60
Query: 69 gagctgcctcttga 82
||||||||||||||
Sbjct: 61 gagctgcctcttga 74
>25699_xtr-mir-15c:mirbase
Length = 74
Score = 147 bits (74), Expect = 2e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 9 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 60
Query: 69 gagctgcctcttga 82
||||||||||||||
Sbjct: 61 gagctgcctcttga 74
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 101 bits (51), Expect = 9e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 9 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 68
|||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ctttgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattct 60
Query: 69 gagctgcctcttgacctca 87
| |||||||| | ||||||
Sbjct: 61 gggctgcctcattacctca 79
>25893_gga-mir-15c:mirbase
Length = 76
Score = 95.6 bits (48), Expect = 6e-21
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 12 tgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattctgag 71
||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1 tgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattctggg 60
Query: 72 ctgcctcttgacctca 87
||||||| | ||||||
Sbjct: 61 ctgcctcattacctca 76
>31427_oan-mir-15c:mirbase
Length = 116
Score = 89.7 bits (45), Expect = 3e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 22 tagcagcacatcatggtttgtagaaacaaggagatacagaccattctgagctgcctc 78
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 28 tagcagcacatcatggtttgtagggacaaggagatacagaccattctgggctgcctc 84
>25892_gga-mir-15b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tctagcagcacatcatggtttg 41
||||||||||||||||||||||
Sbjct: 17 tctagcagcacatcatggtttg 38
>34204_dre-mir-15b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tagcagcacatcatggtttgta 43
||||||||||||||||||||||
Sbjct: 39 tagcagcacatcatggtttgta 60
>26397_tgu-mir-15b:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tagcagcacatcatggtttg 41
||||||||||||||||||||
Sbjct: 11 tagcagcacatcatggtttg 30
>31426_oan-mir-15b:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tagcagcacatcatggtttg 41
||||||||||||||||||||
Sbjct: 31 tagcagcacatcatggtttg 50
