miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>31524_oan-mir-194-2:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 55 ttccagtggagctgctgttat 75
          |||||||||||||||||||||
Sbjct: 52 ttccagtggagctgctgttat 72

>31912_mmu-mir-194-1:mirbase
          Length = 67

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 55 ttccagtggagctgctgtta 74
          ||||||||||||||||||||
Sbjct: 40 ttccagtggagctgctgtta 59

>34345_dre-mir-194a:mirbase
          Length = 84

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 54 cttccagtggagctgctgtt 73
          ||||||||||||||||||||
Sbjct: 47 cttccagtggagctgctgtt 66