miRNEST 2.0, an integrative microRNA resource :: BLAST
>34633_fru-mir-205:mirbase
Length = 79
Score = 93.7 bits (47), Expect = 2e-20
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 17 ttctgtccttcattccaccggagtctgtgcctgtatggaaccagatttcagtggtgtgaa 76
|||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 5 ttctatccttcattccaccggagtctgtatgtgtatttaaccagatttcagtggtgtgaa 64
Query: 77 gtgtaaaagacatgg 91
|||||| ||||||||
Sbjct: 65 gtgtaagagacatgg 79
>34781_tni-mir-205:mirbase
Length = 66
Score = 81.8 bits (41), Expect = 9e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 22 tccttcattccaccggagtctgtgcctgtatggaaccagatttcagtggtgtgaagtgta 81
||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||
Sbjct: 3 tccttcattccaccggagtctgtaactgtttttaaccagatttcagtggtgtgaagtgta 62
Query: 82 a 82
|
Sbjct: 63 a 63
>34363_dre-mir-205:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 17 ttctgtccttcattccaccggagtctgtgcctgtatggaaccagatttcagtggtgtgaa 76
|||| |||||||||||||||||||||||| | | || |||||||||||||||||||
Sbjct: 14 ttctatccttcattccaccggagtctgtgtagttgttcaatcagatttcagtggtgtgaa 73
Query: 77 gtgta 81
|||||
Sbjct: 74 gtgta 78
>26765_cfa-mir-205:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtgcctgtatggaaccagatttcagtggtgtgaagt 78
||||||||||||||||||||||||| | ||| |||||||||||||||| |||||||
Sbjct: 5 tgtccttcattccaccggagtctgt-ctcgtacccaaccagatttcagtggagtgaagt 62
>33283_bta-mir-205:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtgcctgtatggaaccagatttcagtggtgtgaagt 78
||||||||||||||||||||||||| | ||| |||||||||||||||| |||||||
Sbjct: 5 tgtccttcattccaccggagtctgt-ctcgtacccaaccagatttcagtggagtgaagt 62
>25668_xla-mir-205:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ctgtccttcattccaccggagtctgt 44
||||||||||||||||||||||||||
Sbjct: 13 ctgtccttcattccaccggagtctgt 38
>25827_xtr-mir-205a:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ctgtccttcattccaccggagtctgt 44
||||||||||||||||||||||||||
Sbjct: 13 ctgtccttcattccaccggagtctgt 38
>25997_gga-mir-205a:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 8e-08
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtgcctgtatggaaccagatttcagtggtgtgaag 77
||||||||||||||||||||||||| | ||| |||||||||||||||| ||||||
Sbjct: 20 tgtccttcattccaccggagtctgt-ctcgtacctaaccagatttcagtggagtgaag 76
>32795_rno-mir-205:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ctgtccttcattccaccggagtctgt 44
||||||||||||||||||||||||||
Sbjct: 30 ctgtccttcattccaccggagtctgt 55
>27091_eca-mir-205:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 5 tgtccttcattccaccggagtctgt 29
>27423_mdo-mir-205a:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 3 tgtccttcattccaccggagtctgt 27
>27518_age-mir-205:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>27583_lla-mir-205:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>27802_mml-mir-205:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>28233_mne-mir-205:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>28329_ggo-mir-205:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>28524_hsa-mir-205:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>30117_ppa-mir-205:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>30283_ptr-mir-205:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>30901_ppy-mir-205:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 32 tgtccttcattccaccggagtctgt 56
>31531_oan-mir-205:mirbase
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 29 tgtccttcattccaccggagtctgt 53
>31931_mmu-mir-205:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 5 tgtccttcattccaccggagtctgt 29
>34035_ssc-mir-205:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgt 44
|||||||||||||||||||||||||
Sbjct: 5 tgtccttcattccaccggagtctgt 29
>25523_pma-mir-205a:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtccttcattccaccggagtctgt 44
||||||||||||||||||||||||
Sbjct: 9 gtccttcattccaccggagtctgt 32
>25524_pma-mir-205b:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 ccttcattccaccggagtctgt 44
||||||||||||||||||||||
Sbjct: 8 ccttcattccaccggagtctgt 29
>25828_xtr-mir-205b:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ctgtccttcattccaccgga 38
||||||||||||||||||||
Sbjct: 6 ctgtccttcattccaccgga 25
