miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910
OS=Arabidopsis thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 49.7 bits (117), Expect = 6e-06
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 1 WVRTYGQFLEERLECFRILKYDVE 72
WVRTY FLEERLECFR+LKYD+E
Sbjct: 139 WVRTYALFLEERLECFRVLKYDIE 162
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600
OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 48.5 bits (114), Expect = 1e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 1 WVRTYGQFLEERLECFRILKYDVE 72
WVRTY FLEERLECFR+LKYD E
Sbjct: 139 WVRTYALFLEERLECFRVLKYDTE 162
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200
OS=Arabidopsis thaliana GN=At5g57200 PE=2 SV=1
Length = 591
Score = 48.5 bits (114), Expect = 1e-05
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +1
Query: 1 WVRTYGQFLEERLECFRILKYDVE 72
WVRTY FLEERLEC+R+LKYD+E
Sbjct: 139 WVRTYALFLEERLECYRVLKYDIE 162
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940
OS=Arabidopsis thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 48.1 bits (113), Expect = 2e-05
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 1 WVRTYGQFLEERLECFRILKYDVE 72
W+RTY FLEERLEC+R+LKYD+E
Sbjct: 139 WIRTYALFLEERLECYRVLKYDIE 162
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200
OS=Arabidopsis thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 47.4 bits (111), Expect = 3e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 1 WVRTYGQFLEERLECFRILKYDVE 72
WVR Y FLEERLECFR+LKYDVE
Sbjct: 144 WVRFYALFLEERLECFRVLKYDVE 167
