miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus
GN=Tmem87b PE=2 SV=1
Length = 555
Score = 58.2 bits (139), Expect = 2e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 1 KCQSDWKELWIEDAFWRFLFSTILLVIMF 87
KCQSDW ELW++DAFW FLFS IL+VIMF
Sbjct: 422 KCQSDWMELWVDDAFWSFLFSVILIVIMF 450
>sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens
GN=TMEM87B PE=1 SV=1
Length = 555
Score = 55.5 bits (132), Expect = 1e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 1 KCQSDWKELWIEDAFWRFLFSTILLVIMF 87
KCQSDW E W++DAFW FLFS IL+VIMF
Sbjct: 421 KCQSDWMERWVDDAFWSFLFSLILIVIMF 449
>sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus
tropicalis GN=tmem87a PE=2 SV=1
Length = 541
Score = 54.3 bits (129), Expect = 2e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 4 CQSDWKELWIEDAFWRFLFSTILLVIMF 87
CQ+DW ELW++DA+WRFLF ILLVIMF
Sbjct: 416 CQADWMELWVDDAYWRFLFFIILLVIMF 443
>sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus
GN=Tmem87a PE=1 SV=1
Length = 555
Score = 51.6 bits (122), Expect = 2e-06
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +1
Query: 4 CQSDWKELWIEDAFWRFLFSTILLVIM 84
CQSDW+ELW++DA WR LFS IL VIM
Sbjct: 431 CQSDWRELWVDDAIWRLLFSMILFVIM 457
>sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens
GN=TMEM87A PE=1 SV=3
Length = 555
Score = 51.6 bits (122), Expect = 2e-06
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +1
Query: 4 CQSDWKELWIEDAFWRFLFSTILLVIM 84
CQSDW+ELW++DA WR LFS IL VIM
Sbjct: 431 CQSDWRELWVDDAIWRLLFSMILFVIM 457
