miRNEST 2.0, an integrative microRNA resource :: BLAST
>34593_fru-mir-129-1:mirbase
Length = 89
Score = 105 bits (53), Expect = 9e-24
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 29 gtccgtcacgaatctttttgcggtctgggcttgctgttcataaatatcagtctgggaagc 88
|||| |||||||||||||||||||||||||||||||||| | | | | ||||||||||
Sbjct: 1 gtccttcacgaatctttttgcggtctgggcttgctgttctttactggtaatctgggaagc 60
Query: 89 ccttaccccaaaaagcatttgtggaggac 117
||||||||||||||||||||| |||||||
Sbjct: 61 ccttaccccaaaaagcatttgcggaggac 89
>34288_dre-mir-129-2:mirbase
Length = 87
Score = 101 bits (51), Expect = 1e-22
Identities = 75/82 (91%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 34 tcacgaatctttttgcggtctgggcttgctgttcataaatatcagtctgggaagccctta 93
|||||||||||||||||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 6 tcacgaatctttttgcggtctgggcttgctgttctcaactatca--atgggaagccctta 63
Query: 94 ccccaaaaagcatttgtggagg 115
|||||||||||||||| |||||
Sbjct: 64 ccccaaaaagcatttgcggagg 85
>26458_tgu-mir-129:mirbase
Length = 83
Score = 85.7 bits (43), Expect = 8e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaatatcagtctgggaagcccttaccc 96
||||||||||||||||||||||||||||| ||||| || | | |||||||||||||||
Sbjct: 6 cgaatctttttgcggtctgggcttgctgtacataactacctacccgggaagcccttaccc 65
Query: 97 caaaaagcatt 107
|||||||||||
Sbjct: 66 caaaaagcatt 76
>25770_xtr-mir-129-1:mirbase
Length = 90
Score = 81.8 bits (41), Expect = 1e-16
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 39 aatctttttgcggtctgggcttgctgttcataaatatcagtctgggaagcccttacccca 98
||||||||||||||||||||||||||| |||||| | | |||||||||||||||||
Sbjct: 11 aatctttttgcggtctgggcttgctgtatgtaaatacctagccgggaagcccttacccca 70
Query: 99 aaaagcatttgtggagg 115
||||||||||| |||||
Sbjct: 71 aaaagcatttgcggagg 87
>28440_hsa-mir-129-2:mirbase
Length = 90
Score = 73.8 bits (37), Expect = 3e-14
Identities = 71/80 (88%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 10 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 67
Query: 96 ccaaaaagcatttgtggagg 115
|||||||||||||| |||||
Sbjct: 68 ccaaaaagcatttgcggagg 87
>28441_hsa-mir-129-2:mirbase
Length = 90
Score = 73.8 bits (37), Expect = 3e-14
Identities = 71/80 (88%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 10 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 67
Query: 96 ccaaaaagcatttgtggagg 115
|||||||||||||| |||||
Sbjct: 68 ccaaaaagcatttgcggagg 87
>30217_ptr-mir-129-2:mirbase
Length = 89
Score = 73.8 bits (37), Expect = 3e-14
Identities = 71/80 (88%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 9 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 66
Query: 96 ccaaaaagcatttgtggagg 115
|||||||||||||| |||||
Sbjct: 67 ccaaaaagcatttgcggagg 86
>30826_ppy-mir-129-2:mirbase
Length = 90
Score = 73.8 bits (37), Expect = 3e-14
Identities = 71/80 (88%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 10 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 67
Query: 96 ccaaaaagcatttgtggagg 115
|||||||||||||| |||||
Sbjct: 68 ccaaaaagcatttgcggagg 87
>34740_tni-mir-129-1:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 29 gtccgtcacgaatctttttgcggtctgggcttgctgttc 67
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gtccttcacgaatctttttgcggtctgggcttgctgttc 39
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 83 ggaagcccttaccccaaaaagcatttg 109
|||||||||||||||||||||||||||
Sbjct: 51 ggaagcccttaccccaaaaagcatttg 77
>27020_eca-mir-129b:mirbase
Length = 74
Score = 65.9 bits (33), Expect = 8e-12
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 2 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 59
Query: 96 ccaaaaagcatt 107
||||||||||||
Sbjct: 60 ccaaaaagcatt 71
>27021_eca-mir-129b:mirbase
Length = 74
Score = 65.9 bits (33), Expect = 8e-12
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 2 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 59
Query: 96 ccaaaaagcatt 107
||||||||||||
Sbjct: 60 ccaaaaagcatt 71
>31854_mmu-mir-129-2:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 8e-12
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 10 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 67
Query: 96 ccaaaaagcatt 107
||||||||||||
Sbjct: 68 ccaaaaagcatt 79
>31855_mmu-mir-129-2:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 8e-12
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 10 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 67
Query: 96 ccaaaaagcatt 107
||||||||||||
Sbjct: 68 ccaaaaagcatt 79
>32730_rno-mir-129-2:mirbase
Length = 97
Score = 65.9 bits (33), Expect = 8e-12
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 14 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 71
Query: 96 ccaaaaagcatt 107
||||||||||||
Sbjct: 72 ccaaaaagcatt 83
>33209_bta-mir-129-2:mirbase
Length = 94
Score = 65.9 bits (33), Expect = 8e-12
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 11 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 68
Query: 96 ccaaaaagcatt 107
||||||||||||
Sbjct: 69 ccaaaaagcatt 80
>33210_bta-mir-129-2:mirbase
Length = 94
Score = 65.9 bits (33), Expect = 8e-12
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttacc 95
||||||||||||||||||||||||||||| ||||| | | || | |||||||||||||
Sbjct: 11 cgaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttacc 68
Query: 96 ccaaaaagcatt 107
||||||||||||
Sbjct: 69 ccaaaaagcatt 80
>27727_mml-mir-129-2:mirbase
Length = 92
Score = 63.9 bits (32), Expect = 3e-11
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 38 gaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttaccc 96
|||||||||||||||||||||||||||| ||||| | | || | ||||||||||||||
Sbjct: 12 gaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttaccc 69
Query: 97 caaaaagcatt 107
|||||||||||
Sbjct: 70 caaaaagcatt 80
>33977_ssc-mir-129a:mirbase
Length = 80
Score = 63.9 bits (32), Expect = 3e-11
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 38 gaatctttttgcggtctgggcttgctgttcataaat-atcagtctgggaagcccttaccc 96
|||||||||||||||||||||||||||| ||||| | | || | ||||||||||||||
Sbjct: 7 gaatctttttgcggtctgggcttgctgtacataactcaatagcc--ggaagcccttaccc 64
Query: 97 caaaaagcatt 107
|||||||||||
Sbjct: 65 caaaaagcatt 75
>25478_pma-mir-129a:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 37 cgaatctttttgcggtctgggcttgctgttcat 69
|||||||||||||||| ||||||||||||||||
Sbjct: 10 cgaatctttttgcggtttgggcttgctgttcat 42
>27018_eca-mir-129a:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 4 atctttttgcggtctgggcttgctgttc 31
>27019_eca-mir-129a:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 4 atctttttgcggtctgggcttgctgttc 31
>27379_mdo-mir-129:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 4 atctttttgcggtctgggcttgctgttc 31
>27725_mml-mir-129:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 3 atctttttgcggtctgggcttgctgttc 30
>27726_mml-mir-129:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 3 atctttttgcggtctgggcttgctgttc 30
>28439_hsa-mir-129-1:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 3 atctttttgcggtctgggcttgctgttc 30
>30216_ptr-mir-129-1:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 2 atctttttgcggtctgggcttgctgttc 29
>30825_ppy-mir-129-1:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 3 atctttttgcggtctgggcttgctgttc 30
>31484_oan-mir-129:mirbase
Length = 128
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 28 atctttttgcggtctgggcttgctgttc 55
>31852_mmu-mir-129-1:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 4 atctttttgcggtctgggcttgctgttc 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 ggaagcccttaccccaaaaag 103
|||||||||||||||||||||
Sbjct: 47 ggaagcccttaccccaaaaag 67
>31853_mmu-mir-129-1:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 4 atctttttgcggtctgggcttgctgttc 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 ggaagcccttaccccaaaaag 103
|||||||||||||||||||||
Sbjct: 47 ggaagcccttaccccaaaaag 67
>33208_bta-mir-129-1:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 3 atctttttgcggtctgggcttgctgttc 30
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 ggaagcccttaccccaaaaag 103
|||||||||||||||||||||
Sbjct: 47 ggaagcccttaccccaaaaag 67
>33978_ssc-mir-129b:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 atctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||||
Sbjct: 9 atctttttgcggtctgggcttgctgttc 36
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 ggaagcccttaccccaaaaag 103
|||||||||||||||||||||
Sbjct: 53 ggaagcccttaccccaaaaag 73
>32729_rno-mir-129-1:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 tctttttgcggtctgggcttgctgttc 67
|||||||||||||||||||||||||||
Sbjct: 5 tctttttgcggtctgggcttgctgttc 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 ggaagcccttaccccaaaaag 103
|||||||||||||||||||||
Sbjct: 47 ggaagcccttaccccaaaaag 67
>34287_dre-mir-129-1:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 tctttttgcggtctgggcttgctgttc 67
|||||||||||||||||||||||||||
Sbjct: 13 tctttttgcggtctgggcttgctgttc 39
>34594_fru-mir-129-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 tctttttgcggtctgggcttgctgttc 67
|||||||||||||||||||||||||||
Sbjct: 5 tctttttgcggtctgggcttgctgttc 31
>34741_tni-mir-129-2:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 tctttttgcggtctgggcttgctgttc 67
|||||||||||||||||||||||||||
Sbjct: 4 tctttttgcggtctgggcttgctgttc 30
>25771_xtr-mir-129-2:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 ctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||
Sbjct: 9 ctttttgcggtctgggcttgctgttc 34
>26696_cfa-mir-129-1:mirbase
Length = 65
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 ctttttgcggtctgggcttgctgttc 67
||||||||||||||||||||||||||
Sbjct: 1 ctttttgcggtctgggcttgctgttc 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 ggaagcccttaccccaaaaag 103
|||||||||||||||||||||
Sbjct: 43 ggaagcccttaccccaaaaag 63
>26697_cfa-mir-129-2:mirbase
Length = 63
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 42 ctttttgcggtctgggcttgctgttcataa 71
|||||||||||||||||||||||| |||||
Sbjct: 1 ctttttgcggtctgggcttgctgtacataa 30
