miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01960;SSU_rRNA_eukarya;AAYZ01438197.1/1-1685 9978:Ochotona
           princeps (American pika)
          Length = 1685

 Score =  236 bits (119), Expect = 6e-62
 Identities = 131/135 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtggcgtacggaagacccactccctggcgccgctcgtggggggcccaagtccttctgat 60
           ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtggcgtacggaagccccactccccggcgccgctcgtggggggcccaagtccttctgat 242

                                                                       
Query: 61  cgaggcccattccgtggacggtgtgaggccggtagcggcccccggcgcgccgggcccggg 120
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaggcccagcccgtggacggtgtgaggccggtagcggcccccggcgcgccgggcccggg 182

                          
Query: 121 tcttcccggagtcgg 135
           |||||||||||||||
Sbjct: 181 tcttcccggagtcgg 167