miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q94F39|AFP3_ARATH Ninja-family protein AFP3 OS=Arabidopsis
thaliana GN=AFP3 PE=1 SV=1
Length = 231
Score = 72.4 bits (176), Expect = 8e-13
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +2
Query: 134 LMRTCSLPSETEEEWRKRKELQSLRRMEAKRKRSEKQQR 250
L RTCSLP ETEEEWRKRKELQSLRR+EAKRKRSEKQ++
Sbjct: 55 LSRTCSLPVETEEEWRKRKELQSLRRLEAKRKRSEKQRK 93
>sp|Q9LMX5|AFP2_ARATH Ninja-family protein AFP2 OS=Arabidopsis
thaliana GN=AFP2 PE=1 SV=1
Length = 348
Score = 69.7 bits (169), Expect = 5e-12
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = +2
Query: 17 LKRSSSVSDFSPAAATAGTAGVREEEATTCRVPRPCVVPLMRTCSLPSETEEEWRKRKEL 196
LKRSSSV D P +T P V L RT SLP+E EEEWRKRKE+
Sbjct: 80 LKRSSSVLDTVPF------------NDSTVAEPENYTVGLERTTSLPAEMEEEWRKRKEM 127
Query: 197 QSLRRMEAKRKRSEKQ 244
QSLRRMEAKR+R EKQ
Sbjct: 128 QSLRRMEAKRRRCEKQ 143
>sp|Q9LQ98|AFP1_ARATH Ninja-family protein AFP1 OS=Arabidopsis
thaliana GN=AFP1 PE=1 SV=1
Length = 345
Score = 63.2 bits (152), Expect = 5e-10
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = +2
Query: 134 LMRTCSLPSETEEEWRKRKELQSLRRMEAKRKRSEK 241
LMRT SLP+E+EEEWRKRKE+Q+LRRM AKR+RSEK
Sbjct: 110 LMRTTSLPAESEEEWRKRKEMQTLRRMAAKRRRSEK 145
>sp|Q6YVY6|NNJA2_ORYSJ Ninja-family protein Os07g0602900 OS=Oryza
sativa subsp. japonica GN=Os07g0602900 PE=2 SV=1
Length = 319
Score = 62.4 bits (150), Expect = 9e-10
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2
Query: 17 LKRSSSVSDFSPAAATAGTAGVREEEATTCRVPRPCVVPLMRTCSLPSETEEEWRKRKEL 196
L RSSS++ G ++ AT P PLMRT SLP+ETEEE +R+E+
Sbjct: 57 LVRSSSIASICSLPGGGGGGAGGDDVATAAPAP----APLMRTSSLPTETEEERWRRREM 112
Query: 197 QSLRRMEAKRKRSEKQ 244
QSL+R+EAKRKR E++
Sbjct: 113 QSLKRLEAKRKRLERR 128
>sp|Q10Q07|NNJA1_ORYSJ Ninja-family protein Os03g0214200 OS=Oryza
sativa subsp. japonica GN=Os03g0214200 PE=2 SV=1
Length = 401
Score = 59.3 bits (142), Expect = 7e-09
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 11 LHLKRSSSVSDFSPAAA---TAGTAGVREEEATTCRVPRPCVVPLMRTCSLPSETEEEWR 181
L+ +R S ++ PAAA +G+ + R+ LMRT SLP+ E+EWR
Sbjct: 101 LNCRRPSGGAEAEPAAARLPASGSPSSGSSDGEGRRLEVNMTDTLMRTSSLPAGIEDEWR 160
Query: 182 KRKELQSLRRMEAKRKRSEKQ 244
KRKE QSL+R+E KRKR E++
Sbjct: 161 KRKEAQSLKRLEVKRKRIERR 181
>sp|B1B5D5|NNJA3_WHEAT Ninja-family protein 3 OS=Triticum aestivum
GN=AFP-D1 PE=3 SV=1
Length = 310
Score = 56.6 bits (135), Expect = 5e-08
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2
Query: 17 LKRSSSVSDFSPAAATAGTAGVREEEATTCRVPRPCVVPLMRTCSLPSETEEEWRKRKEL 196
L RSSS+ AA G ++ A P PLMRT SLP+ETEEE +R+E+
Sbjct: 57 LVRSSSL------AAMCSLPGTSDDIAAATPPP----APLMRTSSLPTETEEERWRRREM 106
Query: 197 QSLRRMEAKRKRSEKQ 244
QSL+R++AKRKR E++
Sbjct: 107 QSLKRLQAKRKRLERR 122
>sp|B1B5D3|NNJA1_WHEAT Ninja-family protein 1 OS=Triticum aestivum
GN=AFP-A1 PE=3 SV=1
Length = 315
Score = 56.6 bits (135), Expect = 5e-08
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2
Query: 17 LKRSSSVSDFSPAAATAGTAGVREEEATTCRVPRPCVVPLMRTCSLPSETEEEWRKRKEL 196
L RSSS+ AA G ++ A P PLMRT SLP+ETEEE +R+E+
Sbjct: 57 LVRSSSL------AAMCSLPGTSDDLAAATPPP----APLMRTSSLPTETEEERWRRREM 106
Query: 197 QSLRRMEAKRKRSEKQ 244
QSL+R++AKRKR E++
Sbjct: 107 QSLKRLQAKRKRLERR 122
>sp|B1B5D4|NNJA2_WHEAT Ninja-family protein 2 OS=Triticum aestivum
GN=AFP-B1 PE=3 SV=1
Length = 316
Score = 55.8 bits (133), Expect = 8e-08
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2
Query: 17 LKRSSSVSDFSPAAATAGTAGVREEEATTCRVPRPCVVPLMRTCSLPSETEEEWRKRKEL 196
L RSSS+ AA G ++ A P PLMRT SLP+ETEEE +R+E+
Sbjct: 57 LVRSSSL------AAMYSLPGTSDDLAAATPPP----APLMRTSSLPTETEEERWRRREM 106
Query: 197 QSLRRMEAKRKRSEKQ 244
QSL+R++AKRKR E++
Sbjct: 107 QSLKRLQAKRKRLERR 122
>sp|B6SM63|NNJA5_MAIZE Ninja-family protein 5 OS=Zea mays PE=2 SV=1
Length = 307
Score = 53.9 bits (128), Expect = 3e-07
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +2
Query: 17 LKRSSSVSDFS--PAAATAGTAGVREEEATTCRVPRPCVVPLMRTCSLPSETEEEWRKRK 190
L+RSSSV+ PAA T + G ++ P P L+RT SLP+E E+ +R+
Sbjct: 62 LQRSSSVASICSLPAATTGTSCGAQDAGPGPAAAPPP---DLLRTSSLPAEYMEDRLRRR 118
Query: 191 ELQSLRRMEAKRKRSEKQ 244
+QS RR+EAKRKR E++
Sbjct: 119 AMQSQRRLEAKRKRLERR 136
>sp|Q10JI3|NNJA3_ORYSJ Ninja-family protein Os03g0419100 OS=Oryza
sativa subsp. japonica GN=Os03g0419100 PE=2 SV=1
Length = 307
Score = 53.9 bits (128), Expect = 3e-07
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Frame = +2
Query: 38 SDFSPAAATAGTAGVREEEATTCRV------PRPCV-VPLMRTCSLPSETEEEWRKRKEL 196
+D SP A A A A+ C V P P +PL+RT SLP+ETEEE +R+E+
Sbjct: 48 TDMSPDAKRARLAR-SSSIASVCSVSAADGDPSPAAPLPLLRTSSLPTETEEERWRRREM 106
Query: 197 QSLRRMEAKRKRSEKQ 244
Q+ RR+EA+RKR E++
Sbjct: 107 QNRRRLEARRKRLERR 122
>sp|B6TNQ7|NNJA6_MAIZE Ninja-family protein 6 OS=Zea mays PE=2 SV=1
Length = 288
Score = 53.1 bits (126), Expect = 5e-07
Identities = 26/45 (57%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = +2
Query: 113 PRPCV-VPLMRTCSLPSETEEEWRKRKELQSLRRMEAKRKRSEKQ 244
P P +PL+RT SLP+ETEEE +R+E+QS RR+EA+RKR E++
Sbjct: 70 PSPAAPLPLLRTTSLPTETEEERWRRREMQSRRRLEARRKRVERR 114
>sp|B6UGG4|NNJA4_MAIZE Ninja-family protein 4 OS=Zea mays PE=2 SV=1
Length = 260
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Frame = +2
Query: 134 LMRTCSLPSETE----EEWRKRKELQSLRRMEAKRKRSEKQ 244
LMRT SLP+ E ++W+KRKE QSL+R+E K+KR E++
Sbjct: 9 LMRTSSLPAVIEASGNDDWKKRKEAQSLKRLEVKKKRIERR 49
>sp|B6SLJ0|NNJA3_MAIZE Ninja-family protein 3 OS=Zea mays PE=2 SV=1
Length = 262
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Frame = +2
Query: 134 LMRTCSLPSETE----EEWRKRKELQSLRRMEAKRKRSEKQ 244
LMRT SLP+ E ++W+KRKE QSL+R+E K+KR E++
Sbjct: 9 LMRTSSLPAVIEASGNDDWKKRKEAQSLKRLEVKKKRIERR 49
>sp|B4FM28|NNJA2_MAIZE Ninja-family protein 2 OS=Zea mays PE=2 SV=1
Length = 262
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Frame = +2
Query: 134 LMRTCSLPSETE----EEWRKRKELQSLRRMEAKRKRSEKQ 244
LMRT SLP+ E ++W+KRKE QSL+R+E K+KR E++
Sbjct: 9 LMRTSSLPAVIEASGNDDWKKRKEAQSLKRLEVKKKRIERR 49
>sp|B4FAF3|NNJA1_MAIZE Ninja-family protein 1 OS=Zea mays PE=2 SV=1
Length = 393
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Frame = +2
Query: 134 LMRTCSLPSETE----EEWRKRKELQSLRRMEAKRKRSEKQ 244
LMRT SLP+ E ++W+KRKE QSL+R+E K+KR E++
Sbjct: 140 LMRTSSLPAVIEASGNDDWKKRKEAQSLKRLEVKKKRIERR 180
