miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39548_ppt-MIR902b:mirbase
Length = 223
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 ccttcctctagcctatgatgcagattcttcatctgtttgttatcgttctcatggtgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccttcctctagcctatgatgcagattcttcatctgtttgttatcgttctcatggtgtaca 144
Query: 61 taacagacgaaggtctgcatcatagccaagaggaag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 145 taacagacgaaggtctgcatcatagccaagaggaag 180
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 ccttcctctagcctatgatgcagattcttcatctgtttgttatcgttctcatggtgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccttcctctagcctatgatgcagattcttcatctgtttgttatcgttctcatggtgtaca 144
Query: 61 taacagacgaaggtctgcatcatagccaagaggaag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 145 taacagacgaaggtctgcatcatagccaagaggaag 180
>39546_ppt-MIR902a:mirbase
Length = 223
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 60 ataacagacgaaggtctgcatcatagccaag 90
|||||||||||||||||||||||||||||||
Sbjct: 144 ataacagacgaaggtctgcatcatagccaag 174
>39545_ppt-MIR902a:mirbase
Length = 223
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 60 ataacagacgaaggtctgcatcatagccaag 90
|||||||||||||||||||||||||||||||
Sbjct: 144 ataacagacgaaggtctgcatcatagccaag 174
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 ccttcctctagcctatgatgcagattcttcatctgttt 38
|||||| |||| ||||||||||||||||||||||||||
Sbjct: 21 ccttccgctagtctatgatgcagattcttcatctgttt 58
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 64 cagacgaaggtctgcatcatagccaagaggaag 96
|||||||||||||||||||||| ||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaag 113
>39553_ppt-MIR902e:mirbase
Length = 133
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 ccttcctctagcctatgatgcagattcttcatctgttt 38
|||||| |||| ||||||||||||||||||||||||||
Sbjct: 21 ccttccgctagtctatgatgcagattcttcatctgttt 58
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 64 cagacgaaggtctgcatcatagccaagaggaag 96
|||||||||||||||||||||| ||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaag 113
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 2 cttcctctagcctatgatgcagattcttcatctgttt 38
||||| |||| ||||||||||||||||||||||||||
Sbjct: 22 cttccgctagtctatgatgcagattcttcatctgttt 58
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 63 acagacgaaggtctgcatcatagccaagaggaa 95
||||||||||||||||||||||| |||||||||
Sbjct: 88 acagacgaaggtctgcatcatagtcaagaggaa 120
>39557_ppt-MIR902g:mirbase
Length = 141
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 2 cttcctctagcctatgatgcagattcttcatctgttt 38
||||| |||| ||||||||||||||||||||||||||
Sbjct: 22 cttccgctagtctatgatgcagattcttcatctgttt 58
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 63 acagacgaaggtctgcatcatagccaagaggaa 95
||||||||||||||||||||||| |||||||||
Sbjct: 88 acagacgaaggtctgcatcatagtcaagaggaa 120
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 tctagcctatgatgcagattcttcatctgtt 37
|||||| ||||||||||||||||||||||||
Sbjct: 28 tctagcgtatgatgcagattcttcatctgtt 58
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 cagacgaaggtctgcatcatagccaag 90
|||||||||||||||||||||| ||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
>39549_ppt-MIR902c:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 tctagcctatgatgcagattcttcatctgtt 37
|||||| ||||||||||||||||||||||||
Sbjct: 28 tctagcgtatgatgcagattcttcatctgtt 58
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 cagacgaaggtctgcatcatagccaag 90
|||||||||||||||||||||| ||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
>39556_ppt-MIR902f:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 60 ataacagacgaaggtctgcatcatagccaag 90
||||||||||||| ||||||||||| |||||
Sbjct: 71 ataacagacgaagatctgcatcataaccaag 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tatgatgcagattcttcatctg 35
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 60 ataacagacgaaggtctgcatcatagccaag 90
||||||||||||| ||||||||||| |||||
Sbjct: 71 ataacagacgaagatctgcatcataaccaag 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tatgatgcagattcttcatctg 35
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tatgatgcagattcttcatct 34
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 64 cagacgaaggtctgcatcatagccaagaggaag 96
|||| ||||||||||||| ||||| ||||||||
Sbjct: 81 cagatgaaggtctgcatcgtagccgagaggaag 113
>39551_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tatgatgcagattcttcatct 34
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 64 cagacgaaggtctgcatcatagccaagaggaag 96
|||| ||||||||||||| ||||| ||||||||
Sbjct: 81 cagatgaaggtctgcatcgtagccgagaggaag 113
