miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45087_miR398:micropc
Length = 84
Score = 167 bits (84), Expect = 3e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 31 aggagcgacctgagaccacatgtgtgcaccctcaccacactccaaagtgagagtacataa 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagcgacctgagaccacatgtgtgcaccctcaccacactccaaagtgagagtacataa 60
Query: 91 ccacgtgttctcaggtcgcccctg 114
||||||||||||||||||||||||
Sbjct: 61 ccacgtgttctcaggtcgcccctg 84
>45384_miR398:micropc
Length = 83
Score = 165 bits (83), Expect = 1e-41
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 31 aggagcgacctgagaccacatgtgtgcaccctcaccacactccaaagtgagagtacataa 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagcgacctgagaccacatgtgtgcaccctcaccacactccaaagtgagagtacataa 60
Query: 91 ccacgtgttctcaggtcgcccct 113
|||||||||||||||||||||||
Sbjct: 61 ccacgtgttctcaggtcgcccct 83
>46367_miR398:micropc
Length = 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 91 ccacgtgttctcaggtcgcccctg 114
||||||||||||||||||||||||
Sbjct: 50 ccacgtgttctcaggtcgcccctg 73
>45930_miR398:micropc
Length = 63
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 cacgtgttctcaggtcgcccctg 114
|||||||||||||||||||||||
Sbjct: 41 cacgtgttctcaggtcgcccctg 63
>45163_miR398:micropc
Length = 71
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 91 ccacgtgttctcaggtcgcccct 113
|||||||||||||||||||||||
Sbjct: 49 ccacgtgttctcaggtcgcccct 71
>44941_miR398:micropc
Length = 61
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 cacgtgttctcaggtcgcccct 113
||||||||||||||||||||||
Sbjct: 40 cacgtgttctcaggtcgcccct 61
>46312_miR398:micropc
Length = 60
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 cacgtgttctcaggtcgcccc 112
|||||||||||||||||||||
Sbjct: 40 cacgtgttctcaggtcgcccc 60
>46795_miR398:micropc
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 82 gtgttctcaggtcgcccctg 101
>46725_miR398:micropc
Length = 67
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 48 gtgttctcaggtcgcccctg 67
>46604_miR398:micropc
Length = 67
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 48 gtgttctcaggtcgcccctg 67
>46392_miR398:micropc
Length = 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 49 gtgttctcaggtcgcccctg 68
>46371_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 58 gtgttctcaggtcgcccctg 77
>46116_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 58 gtgttctcaggtcgcccctg 77
>46034_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 58 gtgttctcaggtcgcccctg 77
>45519_miR398:micropc
Length = 61
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 42 gtgttctcaggtcgcccctg 61
>45422_miR398:micropc
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 59 gtgttctcaggtcgcccctg 78
>45294_miR398:micropc
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 79 gtgttctcaggtcgcccctg 98
>44891_miR398:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gtgttctcaggtcgcccctg 114
||||||||||||||||||||
Sbjct: 70 gtgttctcaggtcgcccctg 89
