miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q05B52|COQ4_BOVIN Ubiquinone biosynthesis protein COQ4 homolog,
mitochondrial OS=Bos taurus GN=COQ4 PE=2 SV=1
Length = 151
Score = 90.9 bits (224), Expect = 2e-18
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +3
Query: 3 VVRPLCAFRGSPGPSAGVPLRAVSHGAGLLYPEHIPTSLLQKVLLAAG 146
V+RPLCAFRG PGP AGVP RAVSHG GLLYPEHIPTS+LQKVLLAAG
Sbjct: 8 VLRPLCAFRGGPGPPAGVPFRAVSHGTGLLYPEHIPTSVLQKVLLAAG 55
>sp|Q8BGB8|COQ4_MOUSE Ubiquinone biosynthesis protein COQ4 homolog,
mitochondrial OS=Mus musculus GN=Coq4 PE=2 SV=1
Length = 266
Score = 55.1 bits (131), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +3
Query: 42 PSAGVPLRAVSHGAGLLYPEHIPTSLLQKVLLAAG 146
P+ VPLRA SHGA LLYP+HIPT+ LQK+LLAAG
Sbjct: 22 PAVDVPLRAGSHGARLLYPDHIPTTPLQKMLLAAG 56
>sp|Q9Y3A0|COQ4_HUMAN Ubiquinone biosynthesis protein COQ4 homolog,
mitochondrial OS=Homo sapiens GN=COQ4 PE=2 SV=3
Length = 265
Score = 54.7 bits (130), Expect = 2e-07
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +3
Query: 3 VVRPLCAFRGSPGPSAGVPLRAVSHGAGLLYPEHIPTSLLQKVLLAAG 146
V+R LC G P+A +PLRA S GAG LY H+PTS LQK LLAAG
Sbjct: 8 VLRRLCGLPGLQRPAAEMPLRARSDGAGPLYSHHLPTSPLQKGLLAAG 55
>sp|Q4FZU1|COQ4_RAT Ubiquinone biosynthesis protein COQ4 homolog,
mitochondrial OS=Rattus norvegicus GN=Coq4 PE=2 SV=1
Length = 265
Score = 52.4 bits (124), Expect = 9e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 42 PSAGVPLRAVSHGAGLLYPEHIPTSLLQKVLLAAG 146
P+ V LRA SHGA LLYP+HIPT+ LQK+LLAAG
Sbjct: 21 PTVDVLLRAASHGARLLYPDHIPTTPLQKMLLAAG 55
