miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus
musculus GN=Ube2a PE=2 SV=1
Length = 152
Score = 58.9 bits (141), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAPSENNIMVWNAVIFGPEGTPFE
Sbjct: 24 VSGAPSENNIMVWNAVIFGPEGTPFE 49
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo
sapiens GN=UBE2A PE=1 SV=2
Length = 152
Score = 58.9 bits (141), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAPSENNIMVWNAVIFGPEGTPFE
Sbjct: 24 VSGAPSENNIMVWNAVIFGPEGTPFE 49
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus
norvegicus GN=Ube2b PE=2 SV=1
Length = 152
Score = 56.6 bits (135), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAPSENNIM WNAVIFGPEGTPFE
Sbjct: 24 VSGAPSENNIMQWNAVIFGPEGTPFE 49
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B
OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1
Length = 152
Score = 56.6 bits (135), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAPSENNIM WNAVIFGPEGTPFE
Sbjct: 24 VSGAPSENNIMQWNAVIFGPEGTPFE 49
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus
musculus GN=Ube2b PE=1 SV=1
Length = 152
Score = 56.6 bits (135), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAPSENNIM WNAVIFGPEGTPFE
Sbjct: 24 VSGAPSENNIMQWNAVIFGPEGTPFE 49
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo
sapiens GN=UBE2B PE=1 SV=1
Length = 152
Score = 56.6 bits (135), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAPSENNIM WNAVIFGPEGTPFE
Sbjct: 24 VSGAPSENNIMQWNAVIFGPEGTPFE 49
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos
taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 56.6 bits (135), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAPSENNIM WNAVIFGPEGTPFE
Sbjct: 24 VSGAPSENNIMQWNAVIFGPEGTPFE 49
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa
OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2
Length = 151
Score = 51.6 bits (122), Expect = 2e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAP++NNIM+WNAVIFGP TPFE
Sbjct: 24 VSGAPTDNNIMIWNAVIFGPHDTPFE 49
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago
sativa GN=UBC2 PE=2 SV=1
Length = 152
Score = 47.8 bits (112), Expect = 2e-05
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SGAP +NNIM+WNAVIFGP+ TP++
Sbjct: 24 ISGAPQDNNIMLWNAVIFGPDDTPWD 49
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2
OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1
Length = 152
Score = 47.8 bits (112), Expect = 2e-05
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SGAP +NNIM+WNAVIFGP+ TP++
Sbjct: 24 ISGAPQDNNIMLWNAVIFGPDDTPWD 49
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1
OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1
Length = 152
Score = 47.8 bits (112), Expect = 2e-05
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SGAP +NNIM+WNAVIFGP+ TP++
Sbjct: 24 ISGAPQDNNIMLWNAVIFGPDDTPWD 49
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21) GN=UBC2 PE=3 SV=1
Length = 169
Score = 46.6 bits (109), Expect = 5e-05
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SG+P+ +NIMVWNAVIFGP TPFE
Sbjct: 24 ISGSPNPDNIMVWNAVIFGPPETPFE 49
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 46.6 bits (109), Expect = 5e-05
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SG+P+ +NIMVWNAVIFGP TPFE
Sbjct: 24 ISGSPNPDNIMVWNAVIFGPPETPFE 49
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3
OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1
Length = 150
Score = 46.2 bits (108), Expect = 6e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SGAP +NNIM WNA+IFGPE TP++
Sbjct: 24 ISGAPQDNNIMHWNALIFGPEDTPWD 49
>sp|Q4PFA5|UBC2_USTMA Ubiquitin-conjugating enzyme E2 2 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=UBC2 PE=3 SV=1
Length = 185
Score = 46.2 bits (108), Expect = 6e-05
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SGAP +N+M+WNAVIFGP TPFE
Sbjct: 24 ISGAPCADNLMIWNAVIFGPADTPFE 49
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1
OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1
Length = 192
Score = 46.2 bits (108), Expect = 6e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
VSGAP+E+NI+ W A+IFGP+ TPFE
Sbjct: 24 VSGAPTEDNILTWEAIIFGPQETPFE 49
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum
aestivum GN=UBC2 PE=1 SV=1
Length = 152
Score = 45.1 bits (105), Expect = 1e-04
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -3
Query: 80 VSGAPSENNIMVWNAVIFGPEGTPFE 3
+SGAP +NNI +WNAVIFGP+ TP++
Sbjct: 24 ISGAPHDNNITLWNAVIFGPDDTPWD 49
