miRNEST 2.0, an integrative microRNA resource :: BLAST
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 75.8 bits (38), Expect = 9e-15
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 88 cttaattcccttaat-tctcacaatatttgggatcatgctatccctttggattc 140
||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 64 cttaatttccttaatatctcataatatttgggatcatgctatccctttggattc 117
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 21 aggcatccaaagggatcgcattgatcccaaatct 54
||||||||||||||||||||||||||||||||||
Sbjct: 1 aggcatccaaagggatcgcattgatcccaaatct 34
>40470_gma-MIR393:mirbase
Length = 120
Score = 75.8 bits (38), Expect = 9e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 16 ggaggaggcatccaaagggatcgcattgatcccaaatc 53
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggaggcatccaaagggatcgcattgatcccaaatc 38
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 111 tatttgggatcatgctatccctttggattcctccttt 147
||||||||||||||||||||||||||||| |||||||
Sbjct: 84 tatttgggatcatgctatccctttggatttctccttt 120
>40706_mtr-MIR393:mirbase
Length = 135
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 7 actgcaactggaggaggcatccaaagggatcgcattgatcc 47
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2 actgcaacttgaggaggcatccaaagggatcgcattgatcc 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 114 ttgggatcatgctatccctttggattcctccttt 147
|||||||||||| ||||||||||||| |||||||
Sbjct: 93 ttgggatcatgccatccctttggatttctccttt 126
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 16 ggaggaggcatccaaagggatcgcattgatcccaaa 51
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggaggcatccaaagggatcgcattgatcccaaa 36
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 117 ggatcatgctatccctttggattcctcctttgg 149
|||||||||||||||||||||||||||||||||
Sbjct: 51 ggatcatgctatccctttggattcctcctttgg 83
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 69.9 bits (35), Expect = 6e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 112 atttgggatcatgctatccctttggattcctcctttggt 150
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 73 attttggatcatgctatccctttggattcctcctttggt 111
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 17 gaggaggcatccaaagggatcgcattgatcc 47
|||||||||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcc 42
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 gaggaggcatccaaagggatcgcattgatcccaa 50
||||||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcccaa 35
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 112 atttgggatcatgctatccctttggattcctcct 145
|||| |||||||||||||||||||||||||||||
Sbjct: 52 attttggatcatgctatccctttggattcctcct 85
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 17 gaggaggcatccaaagggatcgcattgatccc 48
||||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatccc 33
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 112 atttgggatcatgctatccctttggattcctcct 145
|||| |||||||||||||||||||||||||||||
Sbjct: 51 attttggatcatgctatccctttggattcctcct 84
>42566_sbi-MIR393:mirbase
Length = 139
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 14 ctggaggaggcatccaaagggatcgcattgatcc 47
|||||||| |||||||||||||||||||||||||
Sbjct: 8 ctggaggaagcatccaaagggatcgcattgatcc 41
>39866_aly-MIR393b:mirbase
Length = 169
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 gcaactggaggaggcatccaaagggatcgcattgatcc 47
|||||| ||| | |||||||||||||||||||||||||
Sbjct: 2 gcaactagagaaagcatccaaagggatcgcattgatcc 39
>39865_aly-MIR393a:mirbase
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 gcaactggaggaggcatccaaagggatcgcattgatcc 47
|||||| ||||| | |||||||||||||||||||||||
Sbjct: 2 gcaactagaggaaggatccaaagggatcgcattgatcc 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 117 ggatcatgctatccctttggattcctcctt 146
||||||||||||| |||||||||| |||||
Sbjct: 110 ggatcatgctatctctttggattcatcctt 139
>41997_osa-MIR393:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 gcatccaaagggatcgcattgatcc 47
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 gcatccaaagggatcgcattgatcc 47
|||||||||||||||||||||||||
Sbjct: 33 gcatccaaagggatcgcattgatcc 57
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatccca 49
||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatccca 34
>41238_csi-MIR393:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 8 ctgcaactggaggaggcatccaaagggatcgcattgatcc 47
|||||||| ||||| |||||||||||||||||||||||
Sbjct: 3 ctgcaactagaggataaatccaaagggatcgcattgatcc 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 122 atgctatccctttggattcctcctt 146
||||||||||| |||||||||||||
Sbjct: 86 atgctatccctctggattcctcctt 110
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 atccaaagggatcgcattgatcc 47
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>40075_ath-MIR393a:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 atccaaagggatcgcattgatcc 47
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 117 ggatcatgctatccctttggattcctcctt 146
||||||||||||| |||||||||| |||||
Sbjct: 103 ggatcatgctatctctttggattcatcctt 132
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatcc 47
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>40295_bna-MIR393:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatcc 47
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tccaaagggatcgcattgatc 46
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
