miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34305_dre-mir-137-1:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 8 ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 60
Query: 68 agaatacgcgtagttgaggagagtc 92
|||||||||||||||||||||||||
Sbjct: 61 agaatacgcgtagttgaggagagtc 85
>34306_dre-mir-137-2:mirbase
Length = 128
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 86
Query: 70 aatacgcgtagttgaggagagtcat 94
|||||||||||| ||||||||||||
Sbjct: 87 aatacgcgtagtcgaggagagtcat 111
>25782_xtr-mir-137-1:mirbase
Length = 101
Score = 143 bits (72), Expect = 3e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 8 ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 8 ggctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgctta 67
Query: 68 agaatacgcgtagttgaggagagt 91
||||||||||||||||||||||||
Sbjct: 68 agaatacgcgtagttgaggagagt 91
>25783_xtr-mir-137-2:mirbase
Length = 101
Score = 143 bits (72), Expect = 3e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 8 ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 8 ggctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgctta 67
Query: 68 agaatacgcgtagttgaggagagt 91
||||||||||||||||||||||||
Sbjct: 68 agaatacgcgtagttgaggagagt 91
>25784_xtr-mir-137-3:mirbase
Length = 101
Score = 143 bits (72), Expect = 3e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 8 ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 8 ggctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgctta 67
Query: 68 agaatacgcgtagttgaggagagt 91
||||||||||||||||||||||||
Sbjct: 68 agaatacgcgtagttgaggagagt 91
>25958_gga-mir-137:mirbase
Length = 96
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 6 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 65
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 66 aatacgcgtagtcgaggagagt 87
>27739_mml-mir-137:mirbase
Length = 102
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92
>28453_hsa-mir-137:mirbase
Length = 102
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92
>30228_ptr-mir-137:mirbase
Length = 101
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92
>30838_ppy-mir-137:mirbase
Length = 102
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92
>31493_oan-mir-137a:mirbase
Length = 110
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 16 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 75
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 76 aatacgcgtagtcgaggagagt 97
>32740_rno-mir-137:mirbase
Length = 102
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92
>33222_bta-mir-137:mirbase
Length = 102
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70
Query: 70 aatacgcgtagttgaggagagt 91
|||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92
>34600_fru-mir-137:mirbase
Length = 73
Score = 129 bits (65), Expect = 4e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 14 cttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaata 73
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1 cttcggtgacgggtattcttgggtggataatacggatcacgttgttattgcttaagaata 60
Query: 74 cgcgtagttgagg 86
|||||||||||||
Sbjct: 61 cgcgtagttgagg 73
>26468_tgu-mir-137:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 18 ggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcg 77
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 60
Query: 78 tagttgaggagag 90
|||| ||||||||
Sbjct: 61 tagtcgaggagag 73
>27033_eca-mir-137:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 14 cttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaata 73
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 1 cttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaata 60
Query: 74 cgcgtagttgagg 86
|||||||| ||||
Sbjct: 61 cgcgtagtcgagg 73
>31867_mmu-mir-137:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 14 cttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaata 73
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 1 cttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaata 60
Query: 74 cgcgtagttgagg 86
|||||||| ||||
Sbjct: 61 cgcgtagtcgagg 73
>26710_cfa-mir-137:mirbase
Length = 55
Score = 85.7 bits (43), Expect = 5e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 24 gggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgt 78
||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1 gggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgt 55
>27385_mdo-mir-137:mirbase
Length = 56
Score = 79.8 bits (40), Expect = 3e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 31 cttgggtggataatacggctctcgttgttattgcttaagaatacgcgtagttgagg 86
|||||||||||||||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 1 cttgggtggataatacggattacgttgttattgcttaagaatacgcgtagtcgagg 56
>31494_oan-mir-137b:mirbase
Length = 100
Score = 71.9 bits (36), Expect = 8e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 15 ttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatac 74
|||| |||||||||||||||||| ||||||||| | || ||||||||||| |||||||
Sbjct: 10 ttcgatgacgggtattcttgggtacataatacggatggcgctgttattgcttgagaatac 69
Query: 75 gcgtagttgagg 86
||||||| ||||
Sbjct: 70 gcgtagtcgagg 81
>34747_tni-mir-137:mirbase
Length = 70
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 22 acgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtagt 81
|||||||||||||||| |||||||| | | | | ||||||||||| ||||||||||||||
Sbjct: 7 acgggtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgtagt 66
>25490_pma-mir-137-2:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 8e-11
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 22 acgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtag 80
|||||||||||||||| ||||||| | | |||||||||||||||||||||| |||||
Sbjct: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
>25489_pma-mir-137-1:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 5e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 21 gacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtag 80
|||| |||||||||||| |||||||| || || ||||||||||||||||||| |||||
Sbjct: 16 gacgcgtattcttgggtaaataatacgtttcccgctgttattgcttaagaatacacgtag 75
>35194_aae-mir-137-1:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
||||||||||||| ||||||| |||||||||
Sbjct: 58 gttgttattgcttgagaatacacgtagttga 88
>35195_aae-mir-137-2:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
||||||||||||| ||||||| |||||||||
Sbjct: 60 gttgttattgcttgagaatacacgtagttga 90
>35292_aga-mir-137:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
||||||||||||| ||||||| |||||||||
Sbjct: 50 gttgttattgcttgagaatacacgtagttga 80
>36024_cqu-mir-137:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
||||||||||||| ||||||| |||||||||
Sbjct: 48 gttgttattgcttgagaatacacgtagttga 78
>35064_api-mir-137:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 tgttattgcttaagaatacgcgtagttga 84
||||||||||| ||||||| |||||||||
Sbjct: 49 tgttattgcttgagaatacacgtagttga 77
