miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|A7MBP4|IFT46_DANRE Intraflagellar transport protein 46 homolog
OS=Danio rerio GN=ift46 PE=2 SV=2
Length = 384
Score = 73.9 bits (180), Expect = 3e-13
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 107 EVKVKSIENPEKNPKAIDNWIESITELHRSKPPAT 3
EVKVKSIENPEKNPKAIDNWIESI+ELHRSKPPAT
Sbjct: 244 EVKVKSIENPEKNPKAIDNWIESISELHRSKPPAT 278
>sp|Q6AXQ9|IFT46_RAT Intraflagellar transport protein 46 homolog
OS=Rattus norvegicus GN=Ift46 PE=2 SV=2
Length = 301
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = -1
Query: 104 VKVKSIENPEKNPKAIDNWIESITELHRSKPPAT 3
+KVKS+E+ EKNPKAID WIESI+ELHRSKPPAT
Sbjct: 161 MKVKSLEDAEKNPKAIDTWIESISELHRSKPPAT 194
>sp|Q9DB07|IFT46_MOUSE Intraflagellar transport protein 46 homolog
OS=Mus musculus GN=Ift46 PE=1 SV=1
Length = 301
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = -1
Query: 104 VKVKSIENPEKNPKAIDNWIESITELHRSKPPAT 3
+KVKS+E+ EKNPKAID WIESI+ELHRSKPPAT
Sbjct: 161 MKVKSLEDAEKNPKAIDTWIESISELHRSKPPAT 194
>sp|Q9NQC8|IFT46_HUMAN Intraflagellar transport protein 46 homolog
OS=Homo sapiens GN=IFT46 PE=2 SV=1
Length = 304
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = -1
Query: 104 VKVKSIENPEKNPKAIDNWIESITELHRSKPPAT 3
+KVKS+E+ EKNPKAID WIESI+ELHRSKPPAT
Sbjct: 164 MKVKSLEDAEKNPKAIDTWIESISELHRSKPPAT 197
>sp|Q1LZB4|IFT46_BOVIN Intraflagellar transport protein 46 homolog
OS=Bos taurus GN=IFT46 PE=2 SV=1
Length = 301
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = -1
Query: 104 VKVKSIENPEKNPKAIDNWIESITELHRSKPPAT 3
+KVKS+E+ EKNPKAID WIESI+ELHRSKPPAT
Sbjct: 161 MKVKSLEDAEKNPKAIDTWIESISELHRSKPPAT 194
>sp|Q5DHJ5|IFT46_SCHJA Intraflagellar transport protein 46 homolog
OS=Schistosoma japonicum GN=SJCHGC08984 PE=2 SV=1
Length = 330
Score = 48.9 bits (115), Expect = 1e-05
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = -1
Query: 107 EVKVKSIENPEKNPKAIDNWIESITELHRSKPPAT 3
+V VKS+EN E KAI+NWI+SI +L+R+KPP T
Sbjct: 210 QVTVKSLENAEHQTKAIENWIKSIADLYRTKPPPT 244
