miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26388_tgu-mir-1-1:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagcttg 49
|||||||||||||||||||||||||||||
Sbjct: 62 atacatacttctttacattccatagcttg 34
>27640_mml-mir-1-1:mirbase
Length = 77
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 20 gatacatacttctttacattccatagctt 48
|||||||||||||||||||||||||||||
Sbjct: 71 gatacatacttctttacattccatagctt 43
>28350_hsa-mir-1-1:mirbase
Length = 71
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 20 gatacatacttctttacattccatagctt 48
|||||||||||||||||||||||||||||
Sbjct: 68 gatacatacttctttacattccatagctt 40
>30137_ptr-mir-1-1:mirbase
Length = 70
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 20 gatacatacttctttacattccatagctt 48
|||||||||||||||||||||||||||||
Sbjct: 67 gatacatacttctttacattccatagctt 39
>30742_ppy-mir-1-1:mirbase
Length = 71
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 20 gatacatacttctttacattccatagctt 48
|||||||||||||||||||||||||||||
Sbjct: 68 gatacatacttctttacattccatagctt 40
>26937_eca-mir-1-2:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagctt 48
||||||||||||||||||||||||||||
Sbjct: 70 atacatacttctttacattccatagctt 43
>31416_oan-mir-1a:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagctt 48
||||||||||||||||||||||||||||
Sbjct: 83 atacatacttctttacattccatagctt 56
>31763_mmu-mir-1a-1:mirbase
Length = 77
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagctt 48
||||||||||||||||||||||||||||
Sbjct: 70 atacatacttctttacattccatagctt 43
>33119_bta-mir-1-1:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagctt 48
||||||||||||||||||||||||||||
Sbjct: 70 atacatacttctttacattccatagctt 43
>33905_ssc-mir-1:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagctt 48
||||||||||||||||||||||||||||
Sbjct: 85 atacatacttctttacattccatagctt 58
>34184_dre-mir-1-1:mirbase
Length = 106
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 20 gatacatacttctttacattccatagct 47
||||||||||||||||||||||||||||
Sbjct: 84 gatacatacttctttacattccatagct 57
>34185_dre-mir-1-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagctt 48
||||||||||||||||||||||||||||
Sbjct: 75 atacatacttctttacattccatagctt 48
>25685_xtr-mir-1a-2:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 20 gatacatacttctttacattccatagc 46
|||||||||||||||||||||||||||
Sbjct: 69 gatacatacttctttacattccatagc 43
>26613_cfa-mir-1-1:mirbase
Length = 59
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccatagctt 48
|||||||||||||||||||||||||||
Sbjct: 59 tacatacttctttacattccatagctt 33
>38847_lgi-mir-1:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 77 atacatacttctttacattccatagc 52
>25417_pma-mir-1c:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccatagct 47
||||||||||||||||||||||||||
Sbjct: 77 tacatacttctttacattccatagct 52
>25684_xtr-mir-1a-1:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 74 atacatacttctttacattccatagc 49
>25880_gga-mir-1a-2:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 74 atacatacttctttacattccatagc 49
>26389_tgu-mir-1-2:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 62 atacatacttctttacattccatagc 37
>26936_eca-mir-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 71 atacatacttctttacattccatagc 46
>27327_mdo-mir-1:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 74 atacatacttctttacattccatagc 49
>27641_mml-mir-1-2:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 67 atacatacttctttacattccatagc 42
>28351_hsa-mir-1-2:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 74 atacatacttctttacattccatagc 49
>30036_ppa-mir-1:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 74 atacatacttctttacattccatagc 49
>30138_ptr-mir-1-2:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 74 atacatacttctttacattccatagc 49
>31764_mmu-mir-1a-2:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 68 atacatacttctttacattccatagc 43
>31765_mmu-mir-1b:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 40 atacatacttctttacattccatagc 65
>31766_mmu-mir-1b:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 40 atacatacttctttacattccatagc 65
>33120_bta-mir-1-2:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||||||||||||||||||||||||
Sbjct: 74 atacatacttctttacattccatagc 49
>25879_gga-mir-1a-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatag 45
|||||||||||||||||||||||||
Sbjct: 67 atacatacttctttacattccatag 43
>26614_cfa-mir-1-2:mirbase
Length = 59
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccatagc 46
|||||||||||||||||||||||||
Sbjct: 59 tacatacttctttacattccatagc 35
>34535_fru-mir-1:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatag 45
|||||||||||||||||||||||||
Sbjct: 70 atacatacttctttacattccatag 46
>34683_tni-mir-1:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatag 45
|||||||||||||||||||||||||
Sbjct: 78 atacatacttctttacattccatag 54
>34806_spu-mir-1:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatag 45
|||||||||||||||||||||||||
Sbjct: 81 atacatacttctttacattccatag 57
>24644_bfl-mir-1:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccata 44
||||||||||||||||||||||||
Sbjct: 77 atacatacttctttacattccata 54
>38719_cte-mir-1:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccata 44
|||||||||||||||||||||||
Sbjct: 79 tacatacttctttacattccata 57
>38595_ppc-mir-1:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccata 44
|||||||||||||||||||||||
Sbjct: 87 tacatacttctttacattccata 65
>38486_crm-mir-1:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccata 44
|||||||||||||||||||||||
Sbjct: 75 tacatacttctttacattccata 53
>38126_cbr-mir-1:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccata 44
|||||||||||||||||||||||
Sbjct: 76 tacatacttctttacattccata 54
>38266_cel-mir-1:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccata 44
|||||||||||||||||||||||
Sbjct: 81 tacatacttctttacattccata 59
>25346_odi-mir-1c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 acatacttctttacattccata 44
||||||||||||||||||||||
Sbjct: 85 acatacttctttacattccata 64
>32648_rno-mir-1:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccatagc 46
||||| ||||||||||||||||||||
Sbjct: 75 atacacacttctttacattccatagc 50
>33064_rno-mir-3571:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 atacatacttctttacattccatagc 46
||||| ||||||||||||||||||||
Sbjct: 24 atacacacttctttacattccatagc 49
>35270_aga-mir-1:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccatag 45
||||||||||||||||||||||
Sbjct: 80 catacttctttacattccatag 59
>24806_cin-mir-1:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 92 catacttctttacattccata 72
>24807_cin-mir-1:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 92 catacttctttacattccata 72
>25654_xla-mir-1b:mirbase
Length = 59
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccatagc 46
|||||||||||| ||||||||||||
Sbjct: 59 tacatacttcttaacattccatagc 35
>25686_xtr-mir-1b:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 tacatacttctttacattccatagc 46
|||||||||||| ||||||||||||
Sbjct: 62 tacatacttcttaacattccatagc 38
>25881_gga-mir-1b:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 20 gatacatacttctttacattccata 44
|||||||||||||| ||||||||||
Sbjct: 64 gatacatacttcttaacattccata 40
>34959_isc-mir-1:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 74 catacttctttacattccata 54
>34995_dpu-mir-1:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 76 catacttctttacattccata 56
>35042_api-mir-1:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 79 catacttctttacattccata 59
>35166_aae-mir-1:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 66 catacttctttacattccata 46
>35338_ame-mir-1-1:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 70 catacttctttacattccata 50
>35339_ame-mir-1-2:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 70 catacttctttacattccata 50
>35512_bmo-mir-1a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 71 catacttctttacattccata 51
>35513_bmo-mir-1b:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 12 catacttctttacattccata 32
>36003_cqu-mir-1:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 67 catacttctttacattccata 47
>36075_dan-mir-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 72 catacttctttacattccata 52
>36152_der-mir-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 72 catacttctttacattccata 52
>36235_dgr-mir-1:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 71 catacttctttacattccata 51
>36319_dme-mir-1:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 74 catacttctttacattccata 54
>36320_dme-mir-1:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 74 catacttctttacattccata 54
>36751_dmo-mir-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 74 catacttctttacattccata 54
>36824_dpe-mir-1:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 71 catacttctttacattccata 51
>36899_dps-mir-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 71 catacttctttacattccata 51
>37111_dse-mir-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 72 catacttctttacattccata 52
>37190_dsi-mir-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 72 catacttctttacattccata 52
>37327_dvi-mir-1:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 71 catacttctttacattccata 51
>37402_dwi-mir-1:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 73 catacttctttacattccata 53
>37480_dya-mir-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 73 catacttctttacattccata 53
>37569_ngi-mir-1:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 60 catacttctttacattccata 40
>37630_nvi-mir-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 68 catacttctttacattccata 48
>37685_tca-mir-1:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 65 catacttctttacattccata 45
>37686_tca-mir-1:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 catacttctttacattccata 44
|||||||||||||||||||||
Sbjct: 65 catacttctttacattccata 45
>25415_pma-mir-1a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 26 tacttctttacattccatag 45
||||||||||||||||||||
Sbjct: 69 tacttctttacattccatag 50
>34863_sko-mir-1:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 atacatacttctttacattccata 44
||||||||||| ||||||||||||
Sbjct: 79 atacatacttcattacattccata 56
