miRNEST 2.0, an integrative microRNA resource :: BLAST
>54656_stu-miR156a:pmrd
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacgcagtcgaattgtataaacatttatacaattgtcattt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacgcagtcgaattgtataaacatttatacaattgtcattt 60
Query: 72 gcgtgtgctcacttctcattctgtca 97
||||||||||||||||||||||||||
Sbjct: 61 gcgtgtgctcacttctcattctgtca 86
>48425_cpt-miR156a:pmrd
Length = 101
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacacgcag 37
||||||||||||||||||||||||||||
Sbjct: 9 actgacagaagagagtgagcacacgcag 36
>54769_vvi-miR156d:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 8 agactgacagaagagagtgagcacacgcagtcgaattgtataa 50
||||||||||||||||||||||||| |||| | | ||||||||
Sbjct: 7 agactgacagaagagagtgagcacatgcaggcaatttgtataa 49
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 7 aagactgacagaagagagtgagcacac 33
|||||||||||||||||||||||||||
Sbjct: 3 aagactgacagaagagagtgagcacac 29
>51596_ptc-miR156f:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 7 aagactgacagaagagagtgagcacac 33
|||||||||||||||||||||||||||
Sbjct: 6 aagactgacagaagagagtgagcacac 32
>51591_ptc-miR156a:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 7 aagactgacagaagagagtgagcacac 33
|||||||||||||||||||||||||||
Sbjct: 6 aagactgacagaagagagtgagcacac 32
>54916_zma-miR156f:pmrd
Length = 167
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 76 gtgctcacttctcattctgtcagctctctc 105
||||||||||||| ||||||||||||||||
Sbjct: 129 gtgctcacttctctttctgtcagctctctc 158
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcac 31
|||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcac 40
>48491_ghr-miR156d:pmrd
Length = 96
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacgcag 37
||||||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacacgcag 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 73 cgtgtgctcacttctcattctgtcagct 100
|||||||||||||||| |||||||||||
Sbjct: 68 cgtgtgctcacttctc-ttctgtcagct 94
>51593_ptc-miR156c:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 76 gtgctcacttctcattctgtcagct 100
|||||||||||||||||||||||||
Sbjct: 71 gtgctcacttctcattctgtcagct 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacac 33
||||||||||||||||||||||||
Sbjct: 9 actgacagaagagagtgagcacac 32
>54911_zma-miR156a:pmrd
Length = 152
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacac 33
||||||||||||||||||||||||
Sbjct: 16 actgacagaagagagtgagcacac 39
>54767_vvi-miR156b:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacac 33
||||||||||||||||||||||||
Sbjct: 9 actgacagaagagagtgagcacac 32
>54401_sbi-miR156i:pmrd
Length = 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacac 33
||||||||||||||||||||||||
Sbjct: 1 actgacagaagagagtgagcacac 24
>48243_ath-miRf11143-akr:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 actgacagaagagagtgagcacacgcag 37
||||||||||||||||||||||| ||||
Sbjct: 92 actgacagaagagagtgagcacatgcag 65
>46912_ath-miR156c:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacac 33
||||||||||||||||||||||||
Sbjct: 10 actgacagaagagagtgagcacac 33
>46911_ath-miR156b:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacacgcag 37
||||||||||||||||||||||| ||||
Sbjct: 45 actgacagaagagagtgagcacatgcag 72
>46910_ath-miR156a:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 actgacagaagagagtgagcacac 33
||||||||||||||||||||||||
Sbjct: 19 actgacagaagagagtgagcacac 42
>54923_zma-miR156n:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>54919_zma-miR156i:pmrd
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacacg 35
>54918_zma-miR156h:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>54915_zma-miR156e:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>54914_zma-miR156d:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 16 tgacagaagagagtgagcacacg 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtgctcacttctcattctgtcagc 99
||||||||||||| ||||||||||
Sbjct: 78 gtgctcacttctctttctgtcagc 101
>54913_zma-miR156c:pmrd
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcacac 33
|||||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcacac 42
>54402_sbi-miR157:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>54400_sbi-miR156h:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>54399_sbi-miR156g:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>54393_sbi-miR156a:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>51354_ppr-miR156:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcacac 33
|||||||||||||||||||||||
Sbjct: 1 ctgacagaagagagtgagcacac 23
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctgacagaagagagtgagcacac 33
|||||||||||||||||||||||
Sbjct: 90 ctgacagaagagagtgagcacac 68
>49326_osa-miRf10111-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacg 29
>48813_osa-miR156m:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>48810_osa-miR156j:pmrd
Length = 165
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 42 tgacagaagagagtgagcacacg 64
>48809_osa-miR156i:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacacg 25
>48808_osa-miR156h:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacacg 31
>48807_osa-miR156g:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcacac 33
|||||||||||||||||||||||
Sbjct: 3 ctgacagaagagagtgagcacac 25
>48805_osa-miR156e:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcacacg 32
>48804_osa-miR156d:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>48803_osa-miR156c:pmrd
Length = 149
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcacac 33
|||||||||||||||||||||||
Sbjct: 28 ctgacagaagagagtgagcacac 50
>48802_osa-miR156b:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcacac 33
|||||||||||||||||||||||
Sbjct: 42 ctgacagaagagagtgagcacac 64
>48801_osa-miR156a:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacacg 34
|||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacg 29
>48795_oru-miR156:pmrd
Length = 93
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcacac 33
|||||||||||||||||||||||
Sbjct: 1 ctgacagaagagagtgagcacac 23
>54924_zma-miR156o:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54922_zma-miR156m:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54912_zma-miR156b:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>54768_vvi-miR156c:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>54569_smo-miR156a:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 gacagaagagagtgagcacacg 34
||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacacg 33
>54398_sbi-miR156f:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 gtgctcacttctcattctgtcagctc 101
||||||||||||| ||||||||||||
Sbjct: 103 gtgctcacttctctttctgtcagctc 128
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcac 31
|||||||||||||||||||||
Sbjct: 2 ctgacagaagagagtgagcac 22
>54395_sbi-miR156c:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54394_sbi-miR156b:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>53789_ptc-miRf11967-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>52469_ptc-miRf10647-akr:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 93 tgacagaagagagtgagcacac 72
>51595_ptc-miR156e:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51594_ptc-miR156d:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51592_ptc-miR156b:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>48806_osa-miR156f:pmrd
Length = 186
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcacac 25
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 76 gtgctcacttctcattctgtcagct 100
||||||||||||| |||||||||||
Sbjct: 162 gtgctcacttctctttctgtcagct 186
>48652_hvv-miR156a:pmrd
Length = 394
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>48528_gma-miR156a:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcaca 32
||||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcaca 41
>48489_ghr-miR156b:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>48488_ghr-miR156a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacac 30
>48336_bna-miR156a:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 96 tgacagaagagagtgagcacac 75
>47667_ath-miRf10567-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacac 27
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>46915_ath-miR156f:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>46914_ath-miR156e:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacac 28
>46913_ath-miR156d:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacac 33
||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacac 39
