miRNEST 2.0, an integrative microRNA resource :: BLAST
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 25 ttgccaatgcagcatcatcaagattctcat 54
||||| ||||||||||||||||||||||||
Sbjct: 125 ttgccgatgcagcatcatcaagattctcat 96
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
|||||||||||| |||||||||||
Sbjct: 52 atgtgaatcttggtggtgctgcac 29
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 25 ttgccaatgcagcatcatcaagattctcat 54
||||| ||||||||||||||||||||||||
Sbjct: 3 ttgccgatgcagcatcatcaagattctcat 32
>39852_aly-MIR172a:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 25 ttgccaatgcagcatcatcaagattctcat 54
||||| ||||||||||||||||||||||||
Sbjct: 125 ttgccgatgcagcatcatcaagattctcat 96
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcatg 55
|||||||||||||||||||||||||
Sbjct: 88 atgcagcatcatcaagattctcatg 64
>41993_osa-MIR172d:mirbase
Length = 130
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcactagcaagca 132
|||||||||||||||||||||||| |||||||
Sbjct: 43 atgtgaatcttgatggtgctgcacctgcaagca 11
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 111 atgcagcatcatcaagattctcat 88
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 30 aatgcagcatcatcaagattctcat 54
|||||||||||||||||||||||||
Sbjct: 100 aatgcagcatcatcaagattctcat 76
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 9 atgcagcatcatcaagattc 28
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 25 ttgccaatgcagcatcatcaagattctca 53
||||| |||||||||||||||||||||||
Sbjct: 3 ttgccgatgcagcatcatcaagattctca 31
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 25 ttgccaatgcagcatcatcaagattctca 53
||||| |||||||||||||||||||||||
Sbjct: 158 ttgccgatgcagcatcatcaagattctca 130
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 25 ttgccaatgcagcatcatcaagattctca 53
||||| |||||||||||||||||||||||
Sbjct: 137 ttgccgatgcagcatcatcaagattctca 109
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 25 ttgccaatgcagcatcatcaagattctca 53
||||| |||||||||||||||||||||||
Sbjct: 175 ttgccgatgcagcatcatcaagattctca 147
>41127_tcc-MIR172d:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 25 ttgccaatgcagcatcatcaagattctca 53
|||||||||||||||||||| ||||||||
Sbjct: 115 ttgccaatgcagcatcatcaggattctca 87
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcatg 55
|||||||||||||||||||||||||
Sbjct: 140 atgcagcatcatcaagattctcatg 116
>42778_zma-MIR172d:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
||||||||||||||||||||||||
Sbjct: 24 atgtgaatcttgatggtgctgcac 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 74 atgcagcatcatcaagattctcat 51
>42777_zma-MIR172c:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 123 atgcagcatcatcaagattctcat 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
|||||||||||| |||||||||||
Sbjct: 24 atgtgaatcttggtggtgctgcac 1
>42776_zma-MIR172b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
||||||||||||||||||||||||
Sbjct: 24 atgtgaatcttgatggtgctgcac 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 126 atgcagcatcatcaagattctcat 103
>42775_zma-MIR172a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 83 atgcagcatcatcaagattctcat 60
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
||||||||||||||||||||||||
Sbjct: 24 atgtgaatcttgatggtgctgcac 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 119 atgcagcatcatcaagattctcat 96
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 102 atgcagcatcatcaagattctcat 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
||||||||||||||| ||||||||
Sbjct: 24 atgtgaatcttgatgatgctgcac 1
>41725_ata-MIR172:mirbase
Length = 277
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 229 atgcagcatcatcaagattctcat 206
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 23 atttgccaatgcagcatcatcaagattc 50
||||||| ||||||||||||||||||||
Sbjct: 132 atttgccgatgcagcatcatcaagattc 105
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 23 atttgccaatgcagcatcatcaagattc 50
||||||| ||||||||||||||||||||
Sbjct: 181 atttgccgatgcagcatcatcaagattc 154
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 118 atgcagcatcatcaagattctcat 95
>40324_bra-MIR172b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 102 atgcagcatcatcaagattctcat 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 95 tttctatgtgaatcttgatggtgctgcac 123
|||| ||||||||||| ||||||||||||
Sbjct: 34 tttccatgtgaatcttaatggtgctgcac 6
>40323_bra-MIR172a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 107 atgcagcatcatcaagattctcat 84
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 95 tttctatgtgaatcttgatggtgctgc 121
|||| ||||||||||||||||||||||
Sbjct: 41 tttccatgtgaatcttgatggtgctgc 15
>40307_bol-MIR172b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 102 atgcagcatcatcaagattctcat 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 95 tttctatgtgaatcttgatggtgctgcac 123
|||| ||||||||||| ||||||||||||
Sbjct: 34 tttccatgtgaatcttaatggtgctgcac 6
>40306_bol-MIR172a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 107 atgcagcatcatcaagattctcat 84
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 95 tttctatgtgaatcttgatggtgctgc 121
|||| ||||||||||||||||||||||
Sbjct: 41 tttccatgtgaatcttgatggtgctgc 15
>40064_ath-MIR172b:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 91 atgcagcatcatcaagattctcat 68
>40063_ath-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 98 atgcagcatcatcaagattctcat 75
>39853_aly-MIR172b:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
||||||||||||||||||||||||
Sbjct: 48 atgtgaatcttgatggtgctgcac 25
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctcat 54
||||||||||||||||||||||||
Sbjct: 113 atgcagcatcatcaagattctcat 90
>42779_zma-MIR172e:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 28 ccaatgcagcatcatcaagattc 50
|||||||||||||||||||||||
Sbjct: 158 ccaatgcagcatcatcaagattc 136
>41990_osa-MIR172a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctca 53
|||||||||||||||||||||||
Sbjct: 99 atgcagcatcatcaagattctca 77
>41543_sly-MIR172b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctca 53
|||||||||||||||||||||||
Sbjct: 135 atgcagcatcatcaagattctca 113
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctca 53
|||||||||||||||||||||||
Sbjct: 119 atgcagcatcatcaagattctca 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
||||||||||||||| ||||||||
Sbjct: 34 atgtgaatcttgatgatgctgcac 11
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctca 53
|||||||||||||||||||||||
Sbjct: 120 atgcagcatcatcaagattctca 98
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 100 atgtgaatcttgatggtgctgcac 123
||||||||||||||| ||||||||
Sbjct: 34 atgtgaatcttgatgatgctgcac 11
>40463_gma-MIR172f:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctca 53
|||||||||||||||||||||||
Sbjct: 129 atgcagcatcatcaagattctca 107
>40459_gma-MIR172b:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctca 53
|||||||||||||||||||||||
Sbjct: 134 atgcagcatcatcaagattctca 112
>40458_gma-MIR172a:mirbase
Length = 159
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctca 53
|||||||||||||||||||||||
Sbjct: 140 atgcagcatcatcaagattctca 118
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 32 tgcagcatcatcaagattctcat 54
|||||||||||||||||||||||
Sbjct: 117 tgcagcatcatcaagattctcat 95
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 32 tgcagcatcatcaagattctcat 54
|||||||||||||||||||||||
Sbjct: 117 tgcagcatcatcaagattctcat 95
>41542_sly-MIR172a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattctc 52
||||||||||||||||||||||
Sbjct: 106 atgcagcatcatcaagattctc 85
>41233_csi-MIR172a:mirbase
Length = 162
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 32 tgcagcatcatcaagattctca 53
||||||||||||||||||||||
Sbjct: 134 tgcagcatcatcaagattctca 113
>40066_ath-MIR172d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 32 tgcagcatcatcaagattctca 53
||||||||||||||||||||||
Sbjct: 107 tgcagcatcatcaagattctca 86
>39855_aly-MIR172d:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 32 tgcagcatcatcaagattctca 53
||||||||||||||||||||||
Sbjct: 131 tgcagcatcatcaagattctca 110
>42561_sbi-MIR172e:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tgtgaatcttgatggtgctgcactagcaa 129
|||||||||||||| |||||||| |||||
Sbjct: 74 tgtgaatcttgatgatgctgcaccagcaa 102
>41050_ghr-MIR172:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 25 ttgccaatgcagcatcatcaagattctca 53
|||||| ||||||||||||| ||||||||
Sbjct: 116 ttgccactgcagcatcatcaggattctca 88
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 170 atgcagcatcatcaagattc 151
>41992_osa-MIR172c:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 102 gtgaatcttgatggtgctgcactagcaa 129
||||||||||||| |||||||| |||||
Sbjct: 80 gtgaatcttgatgatgctgcaccagcaa 107
>41991_osa-MIR172b:mirbase
Length = 238
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 228 atgcagcatcatcaagattc 209
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 224 atgcagcatcatcaagattc 205
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 106 atgcagcatcatcaagattc 87
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 143 atgcagcatcatcaagattc 124
>40067_ath-MIR172e:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 115 atgcagcatcatcaagattc 96
>39856_aly-MIR172e:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 atgcagcatcatcaagattc 50
||||||||||||||||||||
Sbjct: 118 atgcagcatcatcaagattc 99
