miRNEST 2.0, an integrative microRNA resource :: BLAST
>41424_ptc-MIR394b:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaaccctc 158
||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaaccgagctctgttggtctctctttgtaaaaccctc 143
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 22 ggtttcttacagagttcattggcattctgtccacctcc 59
|||||||||||||||| |||||||||||||||||||||
Sbjct: 20 ggtttcttacagagtttattggcattctgtccacctcc 57
>41423_ptc-MIR394b:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaaccctc 158
||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaaccgagctctgttggtctctctttgtaaaaccctc 143
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 22 ggtttcttacagagttcattggcattctgtccacctcc 59
|||||||||||||||| |||||||||||||||||||||
Sbjct: 20 ggtttcttacagagtttattggcattctgtccacctcc 57
>41422_ptc-MIR394a:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaaccctc 158
||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaactgagctctgttggtctctctttgtaaaaccctc 143
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 22 ggtttcttacagagttcattggcattctgtccacctcc 59
|||||||||||||||| ||||||||||||||||||||
Sbjct: 20 ggtttcttacagagttttttggcattctgtccacctcc 57
>41421_ptc-MIR394a:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaaccctc 158
||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaactgagctctgttggtctctctttgtaaaaccctc 143
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 22 ggtttcttacagagttcattggcattctgtccacctcc 59
|||||||||||||||| ||||||||||||||||||||
Sbjct: 20 ggtttcttacagagttttttggcattctgtccacctcc 57
>41776_bdi-MIR394:mirbase
Length = 200
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaaccc 156
|||||||||||||||||||||| ||||||||| || ||| |||||||||||||
Sbjct: 125 tggaggtgggcatactgccaatggagctgtgtaggcttccctttgtaaaaccc 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 53 ttggcattctgtccacctcc 72
>41134_tcc-MIR394a:mirbase
Length = 120
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 25 ttcttacagagttcattggcattctgtccacctccc 60
||||||||||||| ||||||||||||||||||||||
Sbjct: 6 ttcttacagagtttattggcattctgtccacctccc 41
Score = 46.1 bits (23), Expect = 9e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctt 146
||||||||||||||||||||| | ||| |||||| |||||||
Sbjct: 78 tggaggtgggcatactgccaactgggctctgttggcttctctt 120
>41055_ghr-MIR394a:mirbase
Length = 167
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 25 ttcttacagagttcattggcattctgtccacctccc 60
||||||||||||| ||||||||||||||||||||||
Sbjct: 28 ttcttacagagtttattggcattctgtccacctccc 63
Score = 60.0 bits (30), Expect = 6e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaa 153
||||||||||||||||||||| | ||| |||||| ||||||||||||||
Sbjct: 105 tggaggtgggcatactgccaactgtgctctgttggcttctctttgtaaaa 154
>41239_csi-MIR394:mirbase
Length = 147
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 25 ttcttacagagttcattggcattctgtccacctcc 59
||||||||||||| |||||||||||||||||||||
Sbjct: 2 ttcttacagagtttattggcattctgtccacctcc 36
Score = 54.0 bits (27), Expect = 4e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctt 146
||||||||||||||||||||| ||||| |||||| |||||||
Sbjct: 105 tggaggtgggcatactgccaactgagctctgttggcttctctt 147
>39867_aly-MIR394a:mirbase
Length = 220
Score = 61.9 bits (31), Expect = 1e-10
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 2 tttcatggaggtttgacaaag-gtttcttacagagttcattggcattctgtccacctcc 59
||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 29 tttcatgagggtttgacaaagagtttcttacagacatctttggcattctgtccacctcc 87
Score = 46.1 bits (23), Expect = 9e-06
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 105 ggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaaccctcatgat 163
||||||||| ||||||||||||||| | |||| | | |||| ||||||||||| ||||
Sbjct: 130 ggaggtgggtatactgccaatagagatctgttagggtttcttcgtaaaaccctcttgat 188
>42789_zma-MIR394a:mirbase
Length = 126
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgt 135
|||||||||||||||||||||| |||||||||
Sbjct: 87 tggaggtgggcatactgccaatggagctgtgt 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 32 agagttcattggcattctgtccacctcc 59
||||||| ||||||||||||||||||||
Sbjct: 13 agagttccttggcattctgtccacctcc 40
>42000_osa-MIR394:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgt 135
|||||||||||||||||||||| |||||||||
Sbjct: 76 tggaggtgggcatactgccaatggagctgtgt 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 32 agagttcattggcattctgtccacctcc 59
||||||| ||||||||||||||||||||
Sbjct: 6 agagttctttggcattctgtccacctcc 33
>41644_vvi-MIR394b:mirbase
Length = 93
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 30 acagagttcattggcattctgtccacctccc 60
|||||||| ||||||||||||||||||||||
Sbjct: 1 acagagtttattggcattctgtccacctccc 31
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 102 tgtggaggtgggcatactgccaa 124
|||||||||||||||||||||||
Sbjct: 59 tgtggaggtgggcatactgccaa 81
>42790_zma-MIR394b:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 32 agagttcattggcattctgtccacctccct 61
||||||| ||||||||||||||||||||||
Sbjct: 13 agagttccttggcattctgtccacctccct 42
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctg 132
|||||||||||||||||||||| ||||||
Sbjct: 83 tggaggtgggcatactgccaatggagctg 111
>40472_gma-MIR394b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 30 acagagttcattggcattctgtccacctcc 59
|||||||| |||||||||||||||||||||
Sbjct: 3 acagagtttattggcattctgtccacctcc 32
>40471_gma-MIR394a:mirbase
Length = 157
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 30 acagagttcattggcattctgtccacctcc 59
|||||||| |||||||||||||||||||||
Sbjct: 29 acagagtttattggcattctgtccacctcc 58
Score = 48.1 bits (24), Expect = 2e-06
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgttggtttctctttgtaaaaccctcatgat 163
||||||||||||||||| ||| ||||| |||||| | | ||||||||| || |||||||
Sbjct: 98 tggaggtgggcatactgtcaactgagctctgttggctacactttgtaaagccttcatgat 157
>39868_aly-MIR394b:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 26 tcttacagagttcattggcattctgtccacctcc 59
|||||||||| || ||||||||||||||||||||
Sbjct: 27 tcttacagagatctttggcattctgtccacctcc 60
>40078_ath-MIR394b:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 27 cttacagagttcattggcattctgtccacctcc 59
||||||||| || ||||||||||||||||||||
Sbjct: 1 cttacagagatctttggcattctgtccacctcc 33
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 105 ggaggtgggcatactgccaatagag 129
|||||||||||||||||||||||||
Sbjct: 88 ggaggtgggcatactgccaatagag 112
>42568_sbi-MIR394a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 32 agagttcattggcattctgtccacctcc 59
||||||| ||||||||||||||||||||
Sbjct: 13 agagttccttggcattctgtccacctcc 40
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaatagagctgtgt 135
||||||||| |||||||||||| |||||||||
Sbjct: 71 tggaggtggacatactgccaatggagctgtgt 102
>42569_sbi-MIR394b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tggaggtgggcatactgccaat 125
||||||||||||||||||||||
Sbjct: 53 tggaggtgggcatactgccaat 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 2 ttggcattctgtccacctcc 21
>40077_ath-MIR394a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 ggaggtgggcatactgccaatagag 129
||||||||| |||||||||||||||
Sbjct: 84 ggaggtgggtatactgccaatagag 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>41645_vvi-MIR394c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41643_vvi-MIR394a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41135_tcc-MIR394b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>41056_ghr-MIR394b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 35 ttggcattctgtccacctcc 54
>40402_ahy-MIR394:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 ttggcattctgtccacctcc 59
||||||||||||||||||||
Sbjct: 22 ttggcattctgtccacctcc 41
