miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45599_miR390:micropc
Length = 68
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 60
Query: 82 ttgagttt 89
||||||||
Sbjct: 61 ttgagttt 68
>45502_miR390:micropc
Length = 68
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 60
Query: 82 ttgagttt 89
||||||||
Sbjct: 61 ttgagttt 68
>45082_miR390:micropc
Length = 68
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 60
Query: 82 ttgagttt 89
||||||||
Sbjct: 61 ttgagttt 68
>45612_miR390:micropc
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatg 24
>44796_miR390:micropc
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatg 24
>46582_miR390:micropc
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>46562_miR390:micropc
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttt 89
|||||||||||||||| |||||||
Sbjct: 73 tatagcgctatccatcctgagttt 96
>46339_miR390:micropc
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>46099_miR390:micropc
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>45789_miR390:micropc
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>45779_miR390:micropc
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttt 89
|||||||||||||||| |||||||
Sbjct: 73 tatagcgctatccatcctgagttt 96
>45682_miR390:micropc
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>45362_miR390:micropc
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttt 89
|||||||||||||||| |||||||
Sbjct: 73 tatagcgctatccatcctgagttt 96
>45123_miR390:micropc
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>44966_miR390:micropc
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
