miRNEST 2.0, an integrative microRNA resource :: BLAST
>39863_aly-MIR390b:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 17 ctataaagctcaggagggatagcaccatgaat 48
||||||||||||||||||||||| ||||||||
Sbjct: 14 ctataaagctcaggagggatagcgccatgaat 45
>40469_gma-MIR390b:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcacc 42
||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcacc 31
>40072_ath-MIR390a:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| |||||||||||||||||||| ||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatga 42
>39862_aly-MIR390a:mirbase
Length = 129
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| |||||||||||||||||||| ||||||
Sbjct: 19 agaatctgtaaagctcaggagggatagcgccatga 53
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 gagaatctataaagctcaggagggatagcaccat 44
|||||||| |||||||||||||||||||| ||||
Sbjct: 10 gagaatctgtaaagctcaggagggatagcgccat 43
>40468_gma-MIR390a:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| |||||||||||||||||||| |||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccatg 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 gcgctatccatcttgagttttatggcttct 99
|||||||||||| ||||||| |||||||||
Sbjct: 67 gcgctatccatcctgagtttcatggcttct 96
>40467_gma-MIR390a:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| |||||||||||||||||||| |||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccatg 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 gcgctatccatcttgagttttatggcttct 99
|||||||||||| ||||||| |||||||||
Sbjct: 67 gcgctatccatcctgagtttcatggcttct 96
>40293_bna-MIR390b:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccat 44
||||||| |||||||||||||||||||| ||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccat 40
>40292_bna-MIR390a:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 70 gcgctatccatcttgagttttatggcttcttcatgct 106
|||||||||||| |||||| |||||||||||| ||||
Sbjct: 95 gcgctatccatcctgagttctatggcttcttcttgct 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 taaagctcaggagggatagcaccatg 45
|||||||||||||||||||| |||||
Sbjct: 31 taaagctcaggagggatagcgccatg 56
>40073_ath-MIR390b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 ctataaagctcaggagggatagcaccatg 45
||||||||||||||||||||||| |||||
Sbjct: 10 ctataaagctcaggagggatagcgccatg 38
>41237_csi-MIR390:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 70 gcgctatccatcttgagttttatggcttcttc 101
|||||||||||| ||||||| |||||||||||
Sbjct: 98 gcgctatccatcctgagtttcatggcttcttc 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| | |||||||||||||||||| |||||
Sbjct: 11 agaatctgttaagctcaggagggatagcgccatg 44
>41640_vvi-MIR390:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| | |||||||||||||||||| ||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatga 35
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| | |||||||||||||||||| ||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatga 35
>40294_bna-MIR390c:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 taaagctcaggagggatagcaccatga 46
|||||||||||||||||||| ||||||
Sbjct: 21 taaagctcaggagggatagcgccatga 47
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 70 gcgctatccatcttgagttttatggcttcttcatgct 106
|||||||||||| |||||| ||||||||||| ||||
Sbjct: 85 gcgctatccatcctgagttccatggcttcttcttgct 121
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| | |||||||||||||||||| |||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttt 89
|||||||||||||||| |||||||
Sbjct: 83 tatagcgctatccatcctgagttt 106
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| | |||||||||||||||||| |||||
Sbjct: 8 agaatctgttaagctcaggagggatagcgccatg 41
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttttatggcttcttcatgct 106
|||||||||||||||| ||||||| || | |||||| ||||
Sbjct: 90 tatagcgctatccatcctgagtttcatcggttcttcttgct 130
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| | |||||||||||||||||| |||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgccatg 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttt 89
|||||||||||||||| |||||||
Sbjct: 87 tatagcgctatccatcctgagttt 110
>40372_rco-MIR390b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 tctatagcgctatccatcttgagttt 89
|||||||||||||||||| |||||||
Sbjct: 90 tctatagcgctatccatcctgagttt 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatg 45
|||||||||||||||||| |||||
Sbjct: 6 aagctcaggagggatagcgccatg 29
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatga 46
|||||||||||||||||| ||||||
Sbjct: 11 aagctcaggagggatagcgccatga 35
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagc 39
||||||| | ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagc 39
||||||| | ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 68 tagcgctatccatcttgagttttatggcttcttcatgctc 107
|||||||||||||| ||||||| || | |||||| |||||
Sbjct: 86 tagcgctatccatcctgagtttcatcggttcttcttgctc 125
