miRNEST 2.0, an integrative microRNA resource :: BLAST
>48575_gma-miR390b:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcacc 42
||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcacc 31
>47212_ath-miRf10112-akr:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| |||||||||||||||||||| ||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatga 42
>46995_ath-miR390a:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| |||||||||||||||||||| ||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatga 42
>48371_bna-miR390b:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccat 44
||||||| |||||||||||||||||||| ||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccat 40
>48370_bna-miR390a:pmrd
Length = 144
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 70 gcgctatccatcttgagttttatggcttcttcatgct 106
|||||||||||| |||||| |||||||||||| ||||
Sbjct: 95 gcgctatccatcctgagttctatggcttcttcttgct 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 taaagctcaggagggatagcaccatg 45
|||||||||||||||||||| |||||
Sbjct: 31 taaagctcaggagggatagcgccatg 56
>46996_ath-miR390b:pmrd
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 ctataaagctcaggagggatagcaccatg 45
||||||||||||||||||||||| |||||
Sbjct: 10 ctataaagctcaggagggatagcgccatg 38
>52711_ptc-miRf10889-akr:pmrd
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 11 gagaatctataaagctcaggagggatagcaccatga 46
|||||||| | |||||||||||||||||| ||||||
Sbjct: 3 gagaatctgttaagctcaggagggatagcgccatga 38
>54848_vvi-miR390:pmrd
Length = 140
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| | |||||||||||||||||| ||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatga 35
>51716_ptc-miR390a:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatga 46
||||||| | |||||||||||||||||| ||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatga 35
>48372_bna-miR390c:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 taaagctcaggagggatagcaccatga 46
|||||||||||||||||||| ||||||
Sbjct: 21 taaagctcaggagggatagcgccatga 47
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 70 gcgctatccatcttgagttttatggcttcttcatgct 106
|||||||||||| |||||| ||||||||||| ||||
Sbjct: 85 gcgctatccatcctgagttccatggcttcttcttgct 121
>48500_ghr-miR390c:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| | |||||||||||||||||| |||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttt 89
|||||||||||||||| |||||||
Sbjct: 83 tatagcgctatccatcctgagttt 106
>48499_ghr-miR390b:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| | |||||||||||||||||| |||||
Sbjct: 8 agaatctgttaagctcaggagggatagcgccatg 41
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttttatggcttcttcatgct 106
|||||||||||||||| ||||||| || | |||||| ||||
Sbjct: 90 tatagcgctatccatcctgagtttcatcggttcttcttgct 130
>48498_ghr-miR390a:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagcaccatg 45
||||||| | |||||||||||||||||| |||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgccatg 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tatagcgctatccatcttgagttt 89
|||||||||||||||| |||||||
Sbjct: 87 tatagcgctatccatcctgagttt 110
>51718_ptc-miR390c:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatga 46
|||||||||||||||||| ||||||
Sbjct: 11 aagctcaggagggatagcgccatga 35
>47211_ath-miRf10111-akr:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcaccatga 46
|||||||||||||||||| ||||||
Sbjct: 1 aagctcaggagggatagcgccatga 25
>51719_ptc-miR390d:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagc 39
||||||| | ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>51717_ptc-miR390b:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 agaatctataaagctcaggagggatagc 39
||||||| | ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
