miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41071_ghr-MIR2949a:mirbase
Length = 114
Score = 226 bits (114), Expect = 3e-60
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 5 gtcttagtttgcgtcttgacttttgaactggatttgccgacttgaactgcgttgttgatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcttagtttgcgtcttgacttttgaactggatttgccgacttgaactgcgttgttgatg 60
Query: 65 gtttccaaaacccgagcctgcaaatccagtcaaaagttaaaaccgggctgagat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttccaaaacccgagcctgcaaatccagtcaaaagttaaaaccgggctgagat 114
>41073_ghr-MIR2949c:mirbase
Length = 182
Score = 202 bits (102), Expect = 4e-53
Identities = 118/122 (96%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 1 tactgtcttagtttgcgtcttgacttttgaactggatttgccgacttgaactgcgttgtt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 33 tactgtcttagtttgcgtcttgtcttttgaactggatttgccgacttgaactgcgttgtt 92
Query: 61 gatggtttccaaaacccgagcctgcaaatccagtcaaaagttaaaaccgggctgagattt 120
|| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 93 gaaggtttacaaaacccgagcctgcaaatccagtcaaaagtt-aaaccgggctgagattt 151
Query: 121 ac 122
||
Sbjct: 152 ac 153
>41072_ghr-MIR2949b:mirbase
Length = 182
Score = 202 bits (102), Expect = 4e-53
Identities = 118/122 (96%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 1 tactgtcttagtttgcgtcttgacttttgaactggatttgccgacttgaactgcgttgtt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 33 tactgtcttagtttgcgtcttgtcttttgaactggatttgccgacttgaactgcgttgtt 92
Query: 61 gatggtttccaaaacccgagcctgcaaatccagtcaaaagttaaaaccgggctgagattt 120
|| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 93 gaaggtttacaaaacccgagcctgcaaatccagtcaaaagtt-aaaccgggctgagattt 151
Query: 121 ac 122
||
Sbjct: 152 ac 153
