miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41047_ghr-MIR164:mirbase
Length = 101
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 1 aaactcacggtggagaaggggagcacgtgcaaagttcacttaaacataggaacttgcacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aaactcacggtggagaaggggagcacgtgcaaagttcacttaaacataggaacttgcacg 34
Query: 61 tgccctgcttctccaacaagagat 84
||||||||||||||||||||||||
Sbjct: 33 tgccctgcttctccaacaagagat 10
>41092_tcc-MIR164b:mirbase
Length = 130
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 52 acttgcacgtgccctgcttctccaacaagag 82
|||||||||||||||||||||||||||||||
Sbjct: 44 acttgcacgtgccctgcttctccaacaagag 14
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 2 aactcacggtggagaaggggagcacgtgcaaagttcact 40
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 119 aactcatggtggagaaggggagcacgtgcacagttcact 81
>40438_gma-MIR164:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 52 acttgcacgtgccctgcttctccaacaag 80
|||||||||||||||||||||||||||||
Sbjct: 34 acttgcacgtgccctgcttctccaacaag 6
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgcaaag 34
||||||||||||||||||||||||
Sbjct: 85 tggagaaggggagcacgtgcaaag 62
>41091_tcc-MIR164a:mirbase
Length = 128
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaacaag 80
|||||||||||||||||||||||||||
Sbjct: 42 ttgcacgtgccctgcttctccaacaag 16
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgca 31
|||||||||||||||||||||
Sbjct: 108 tggagaaggggagcacgtgca 88
>40666_mtr-MIR164c:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaacaag 80
|||||||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctccaacaag 1
>40664_mtr-MIR164a:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaacaag 80
|||||||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctccaacaag 1
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgcaaa 33
|||||||||||||||||||||||
Sbjct: 93 tggagaaggggagcacgtgcaaa 71
>41579_vvi-MIR164a:mirbase
Length = 121
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctccaacaag 80
||||||||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctccaacaag 6
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 109 tggagaaggggagcacgtgcaa 88
>41318_ptc-MIR164c:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 53 cttgcacgtgccctgcttctccaacaagag 82
||||||||||||||||||||||| ||||||
Sbjct: 33 cttgcacgtgccctgcttctccagcaagag 4
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 74 tggagaaggggagcacgtgcaa 53
>41741_bdi-MIR164e:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaaca 78
|||||||||||||||||||||||||
Sbjct: 40 ttgcacgtgccctgcttctccaaca 16
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 9 ggtggagaaggggagcacgtgca 31
|||||||||||||||| ||||||
Sbjct: 112 ggtggagaaggggagcgcgtgca 90
>40027_ath-MIR164a:mirbase
Length = 113
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaaca 78
|||||||||||||||||||||||||
Sbjct: 40 ttgcacgtgccctgcttctccaaca 16
>41933_osa-MIR164c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaacaaga 81
|||||||| |||||||||||||||||||
Sbjct: 32 ttgcacgtaccctgcttctccaacaaga 5
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 ggtggagaaggggagcacgtgca 31
|||||||||||||||||||||||
Sbjct: 111 ggtggagaaggggagcacgtgca 89
>41582_vvi-MIR164d:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctccaacaagag 82
||||||||||||||||||||| ||||||
Sbjct: 31 tgcacgtgccctgcttctccatcaagag 4
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgca 31
|||||||||||||||||||||
Sbjct: 106 tggagaaggggagcacgtgca 86
>40313_bra-MIR164a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaac 77
||||||||||||||||||||||||
Sbjct: 31 ttgcacgtgccctgcttctccaac 8
>40263_bna-MIR164:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaac 77
||||||||||||||||||||||||
Sbjct: 28 ttgcacgtgccctgcttctccaac 5
>39816_aly-MIR164a:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaac 77
||||||||||||||||||||||||
Sbjct: 24 ttgcacgtgccctgcttctccaac 1
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgcaaa 33
||||||||||||| |||||||||
Sbjct: 77 tggagaaggggagtacgtgcaaa 55
>42715_zma-MIR164g:mirbase
Length = 171
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 ggtggagaaggggagcacgtgca 31
|||||||||||||||||||||||
Sbjct: 170 ggtggagaaggggagcacgtgca 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctccaa 76
||||||||||||||||||||||
Sbjct: 22 tgcacgtgccctgcttctccaa 1
>42507_sbi-MIR164e:mirbase
Length = 205
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctccaac 77
|||||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctccaac 1
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 ggtggagaaggggagcacgtgca 31
|||||||||||||||||||||||
Sbjct: 203 ggtggagaaggggagcacgtgca 181
>41931_osa-MIR164a:mirbase
Length = 156
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctccaac 77
|||||||||||||||||||||||
Sbjct: 37 tgcacgtgccctgcttctccaac 15
>41740_bdi-MIR164d:mirbase
Length = 186
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctccaac 77
|||||||||||||||||||||||
Sbjct: 38 tgcacgtgccctgcttctccaac 16
>41738_bdi-MIR164b:mirbase
Length = 209
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctccaac 77
|||||||||||||||||||||||
Sbjct: 53 tgcacgtgccctgcttctccaac 31
>41316_ptc-MIR164a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaacaag 80
|||||||||||||||||||||| ||||
Sbjct: 32 ttgcacgtgccctgcttctccagcaag 6
>40344_rco-MIR164b:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgcaaa 33
|||||||||||||||||||||||
Sbjct: 97 tggagaaggggagcacgtgcaaa 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctcca 75
||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctcca 6
>40343_rco-MIR164a:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctccaacaag 80
|||||||||||||||||||||| ||||
Sbjct: 27 ttgcacgtgccctgcttctccagcaag 1
>41319_ptc-MIR164d:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctcca 75
||||||||||||||||||||||
Sbjct: 32 ttgcacgtgccctgcttctcca 11
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 11 tggagaaggggagcacgtgcaaag 34
||||| ||||||||||||||||||
Sbjct: 91 tggaggaggggagcacgtgcaaag 68
>40665_mtr-MIR164b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 ttgcacgtgccctgcttctcca 75
||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctcca 6
>42712_zma-MIR164d:mirbase
Length = 216
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 40 tgcacgtgccctgcttctcca 20
>42711_zma-MIR164c:mirbase
Length = 270
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 38 tgcacgtgccctgcttctcca 18
>42710_zma-MIR164b:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 41 tgcacgtgccctgcttctcca 21
>42709_zma-MIR164a:mirbase
Length = 152
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 39 tgcacgtgccctgcttctcca 19
>42637_tae-MIR164:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctcca 3
>42506_sbi-MIR164d:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>42503_sbi-MIR164:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>41936_osa-MIR164f:mirbase
Length = 210
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 44 tgcacgtgccctgcttctcca 24
>41932_osa-MIR164b:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 29 tgcacgtgccctgcttctcca 9
>41742_bdi-MIR164f:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 124 tgcacgtgccctgcttctcca 144
>41739_bdi-MIR164c:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 56 gcacgtgccctgcttctccaacaag 80
|||||||||||||||||||| ||||
Sbjct: 53 gcacgtgccctgcttctccagcaag 29
>41737_bdi-MIR164a:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 51 tgcacgtgccctgcttctcca 31
>41581_vvi-MIR164c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>41320_ptc-MIR164e:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>41317_ptc-MIR164b:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>41278_ctr-MIR164:mirbase
Length = 297
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 42 tgcacgtgccctgcttctcca 22
>41221_csi-MIR164:mirbase
Length = 278
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 34 tgcacgtgccctgcttctcca 14
>40345_rco-MIR164c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 26 tgcacgtgccctgcttctcca 6
>40029_ath-MIR164c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 56 gcacgtgccctgcttctccaacaag 80
|||||||||||||||||||| ||||
Sbjct: 30 gcacgtgccctgcttctccatcaag 6
>40028_ath-MIR164b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctcca 3
>39818_aly-MIR164c:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 56 gcacgtgccctgcttctccaacaag 80
|||||||||||||||||||| ||||
Sbjct: 37 gcacgtgccctgcttctccatcaag 13
>39817_aly-MIR164b:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 tgcacgtgccctgcttctcca 75
|||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctcca 3
>42714_zma-MIR164f:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 56 gcacgtgccctgcttctcca 75
||||||||||||||||||||
Sbjct: 21 gcacgtgccctgcttctcca 2
>42504_sbi-MIR164b:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 56 gcacgtgccctgcttctcca 75
||||||||||||||||||||
Sbjct: 40 gcacgtgccctgcttctcca 21
>41934_osa-MIR164d:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 56 gcacgtgccctgcttctcca 75
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>42716_zma-MIR164h:mirbase
Length = 219
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 57 cacgtgccctgcttctcca 75
|||||||||||||||||||
Sbjct: 20 cacgtgccctgcttctcca 2
>41935_osa-MIR164e:mirbase
Length = 132
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 57 cacgtgccctgcttctcca 75
|||||||||||||||||||
Sbjct: 29 cacgtgccctgcttctcca 11
