miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46770_miR156:micropc
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 13 gacagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgt 60
Query: 73 gctcactactctttctgtc 91
|||||||||||||||||||
Sbjct: 61 gctcactactctttctgtc 79
>45322_miR156:micropc
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 13 gacagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgt 60
Query: 73 gctcactactctttctgtc 91
|||||||||||||||||||
Sbjct: 61 gctcactactctttctgtc 79
>46244_miR156:micropc
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 15 cagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgtgc 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgtgc 60
Query: 75 tcactactctttctg 89
|||||||||||||||
Sbjct: 61 tcactactctttctg 75
>44988_miR156:micropc
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 15 cagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgtgc 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgtgc 60
Query: 75 tcactactctttctg 89
|||||||||||||||
Sbjct: 61 tcactactctttctg 75
>46408_miR156:micropc
Length = 81
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacaaagaggcac 41
||||||||||||||||||||| ||||||||
Sbjct: 1 tgacagaagagagtgagcacacagaggcac 30
>45314_miR156:micropc
Length = 81
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacaaagaggcac 41
||||||||||||||||||||| ||||||||
Sbjct: 1 tgacagaagagagtgagcacacagaggcac 30
>45274_miR156:micropc
Length = 81
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacaaagaggcac 41
||||||||||||||||||||| ||||||||
Sbjct: 1 tgacagaagagagtgagcacacagaggcac 30
>45251_miR156:micropc
Length = 81
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcacaaagaggcac 41
||||||||||||||||||||| ||||||||
Sbjct: 1 tgacagaagagagtgagcacacagaggcac 30
>46824_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46794_miR156:micropc
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46791_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46719_miR156:micropc
Length = 98
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46685_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46623_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46602_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46574_miR156:micropc
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46565_miR156:micropc
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46538_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46446_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46430_miR156:micropc
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46377_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46320_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46235_miR156:micropc
Length = 98
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46220_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46211_miR156:micropc
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46153_miR156:micropc
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46134_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46123_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46035_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>46027_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45872_miR156:micropc
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45867_miR156:micropc
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45863_miR156:micropc
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45835_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45823_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45778_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45776_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45762_miR156:micropc
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45715_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45705_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45677_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45556_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45524_miR156:micropc
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45399_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45385_miR156:micropc
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45311_miR156:micropc
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45286_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45182_miR156:micropc
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45146_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45140_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45110_miR156:micropc
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45086_miR156:micropc
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45065_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>45058_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>44816_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>44810_miR156:micropc
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
>44792_miR156:micropc
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcaca 32
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcaca 21
