miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>44882_miR169:micropc
Length = 76
Score = 151 bits (76), Expect = 1e-37
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccgg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccgg 60
Query: 75 caagtggttcttggct 90
||||||||||||||||
Sbjct: 61 caagtggttcttggct 76
>44852_miR169:micropc
Length = 76
Score = 151 bits (76), Expect = 1e-37
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccgg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccgg 60
Query: 75 caagtggttcttggct 90
||||||||||||||||
Sbjct: 61 caagtggttcttggct 76
>46485_miR169:micropc
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccggc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccggc 60
Query: 76 aagtggttcttggct 90
|||||||||||||||
Sbjct: 61 aagtggttcttggct 75
>46331_miR169:micropc
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccggc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccggc 60
Query: 76 aagtggttcttggct 90
|||||||||||||||
Sbjct: 61 aagtggttcttggct 75
>46050_miR169:micropc
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccggc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggcgttatgctgcatgatgctttttacggcgactttgccggc 60
Query: 76 aagtggttcttggct 90
|||||||||||||||
Sbjct: 61 aagtggttcttggct 75
>46714_miR169:micropc
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>46330_miR169:micropc
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>46294_miR169:micropc
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>46223_miR169:micropc
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>46022_miR169:micropc
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>45963_miR169:micropc
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>45747_miR169:micropc
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>45191_miR169:micropc
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 92 cagccaaggatgacttgccggc 71
>45170_miR169:micropc
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>45027_miR169:micropc
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccggc 36
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>46831_miR169:micropc
Length = 144
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>46673_miR169:micropc
Length = 144
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>46642_miR169:micropc
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46624_miR169:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46552_miR169:micropc
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46509_miR169:micropc
Length = 142
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46196_miR169:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46118_miR169:micropc
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46057_miR169:micropc
Length = 142
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45943_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45806_miR169:micropc
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45585_miR169:micropc
Length = 142
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45396_miR169:micropc
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45359_miR169:micropc
Length = 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccgg 35
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>45348_miR169:micropc
Length = 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccgg 35
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>45343_miR169:micropc
Length = 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccgg 35
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>45313_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45221_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45200_miR169:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45107_miR169:micropc
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45039_miR169:micropc
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>44923_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>44916_miR169:micropc
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>44892_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccggc 36
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46720_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccgg 35
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgg 20
>46378_miR169:micropc
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccg 34
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>46208_miR169:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccg 34
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>46140_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccgg 35
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgg 20
>45957_miR169:micropc
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccg 34
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45932_miR169:micropc
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccg 34
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>45785_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 agccaaggatgacttgccgg 35
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgg 20
>45596_miR169:micropc
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccg 34
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>44868_miR169:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccg 34
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>44851_miR169:micropc
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 cagccaaggatgacttgccg 34
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
