miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91
PE=2 SV=2
Length = 1191
Score = 60.1 bits (144), Expect = 4e-09
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -2
Query: 134 VQWLTPVISALWEAEAGGSRGQEIETILANMVKPRLY 24
+ +TPVI LWEAEAGGSRGQE+ETILAN VKP LY
Sbjct: 1155 IHTITPVIPLLWEAEAGGSRGQEMETILANTVKPLLY 1191
>sp|Q7Z5D8|NANGN_HUMAN NANOG neighbor homeobox OS=Homo sapiens
GN=NANOGNB PE=2 SV=1
Length = 188
Score = 55.8 bits (133), Expect = 8e-08
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -2
Query: 131 QWLTPVISALWEAEAGGSRGQEIETILAN 45
+WLTPVI ALWEAEAG SRGQEIETILAN
Sbjct: 5 RWLTPVIPALWEAEAGRSRGQEIETILAN 33
>sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by
NCRNA00269 OS=Homo sapiens GN=NCRNA00269 PE=5 SV=1
Length = 174
Score = 38.9 bits (89), Expect(2) = 3e-07
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 12 FVFLVETGFHHVSQDGLDLLTS 77
FVF VETGFHHV Q GL LLTS
Sbjct: 122 FVFSVETGFHHVGQAGLKLLTS 143
Score = 34.7 bits (78), Expect(2) = 3e-07
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 79 DPPASASQSAEITGVSH 129
DPPASASQSA ITGVSH
Sbjct: 145 DPPASASQSAGITGVSH 161
>sp|Q96N38|ZN714_HUMAN Zinc finger protein 714 OS=Homo sapiens
GN=ZNF714 PE=2 SV=1
Length = 555
Score = 51.2 bits (121), Expect = 2e-06
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = -1
Query: 129 VAHTCNLSTLGS*GRRITRSRDRDHPG*HGETPSLLKIQK 10
VAH CN +TL G +I RS +D PG HG+TPSLLKIQK
Sbjct: 507 VAHACNPNTLRGLGEQIARSGVQDQPGQHGKTPSLLKIQK 546
>sp|Q8WTZ3|YS049_HUMAN Zinc finger protein ENSP00000375192 OS=Homo
sapiens PE=2 SV=1
Length = 238
Score = 50.1 bits (118), Expect = 4e-06
Identities = 27/44 (61%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Frame = +3
Query: 12 FVFLVETGFHHVSQDGLDLLTS*S----ACLSFPKC*DYRCEPL 131
FVFLVETGFHH Q G +LLTS A S PKC DY+ EPL
Sbjct: 147 FVFLVETGFHHFDQAGFELLTSSDPPALASQSAPKCWDYKHEPL 190
>sp|Q96CB5|CH044_HUMAN Putative uncharacterized protein C8orf44
OS=Homo sapiens GN=C8orf44 PE=2 SV=2
Length = 159
Score = 37.0 bits (84), Expect(2) = 9e-06
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -3
Query: 76 EVKRSRPSWLTW*NPVSTKNTK 11
EV+ S+P+W TW NP+ TKNTK
Sbjct: 58 EVRSSKPAWPTWRNPIFTKNTK 79
Score = 31.6 bits (70), Expect(2) = 9e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2
Query: 131 QWLTPVISALWEAEAGGS 78
+WL PVI ALWEA+AG S
Sbjct: 39 RWLMPVIPALWEAKAGRS 56
>sp|Q8N976|YG039_HUMAN Putative uncharacterized protein FLJ38264
OS=Homo sapiens PE=5 SV=1
Length = 141
Score = 40.4 bits (93), Expect(2) = 1e-05
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 12 FVFLVETGFHHVSQDGLDLLTS 77
FVFLVETGFHHV GL+LLTS
Sbjct: 38 FVFLVETGFHHVGHAGLELLTS 59
Score = 28.1 bits (61), Expect(2) = 1e-05
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 79 DPPASASQSAEITGVSH 129
DPP AS+SA ITG+SH
Sbjct: 61 DPPTLASRSAGITGMSH 77
>sp|Q99959|PKP2_HUMAN Plakophilin-2 OS=Homo sapiens GN=PKP2 PE=1
SV=2
Length = 881
Score = 43.5 bits (101), Expect = 4e-04
Identities = 23/35 (65%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -1
Query: 141 GW-SAVAHTCNLSTLGS*GRRITRSRDRDHPG*HG 40
GW AVAH CN STLG G RITRS RD P HG
Sbjct: 470 GWPGAVAHACNPSTLGGQGGRITRSGVRDQPDQHG 504
>sp|Q8NHA8|OR1FC_HUMAN Olfactory receptor 1F12 OS=Homo sapiens
GN=OR1F12 PE=3 SV=1
Length = 337
Score = 43.1 bits (100), Expect = 5e-04
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = -1
Query: 156 SLCHPGWSAVAHTCNLSTLGS*GRRITRSRDRDHPG 49
+L PG AVAH CN STLG G I RS DRDHPG
Sbjct: 304 TLSRPG--AVAHACNPSTLGGRGGWIMRSGDRDHPG 337
>sp|P49796|RGS3_HUMAN Regulator of G-protein signaling 3 OS=Homo
sapiens GN=RGS3 PE=1 SV=2
Length = 1198
Score = 42.7 bits (99), Expect = 7e-04
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -2
Query: 119 PVISALWEAEAGGSRGQEIETILAN 45
PVI ALWE E G S+GQEIETILAN
Sbjct: 2 PVIPALWEVEMGRSQGQEIETILAN 26
>sp|Q86V71|ZN429_HUMAN Zinc finger protein 429 OS=Homo sapiens
GN=ZNF429 PE=1 SV=2
Length = 674
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = -1
Query: 129 VAHTCNLSTLGS*GRRITRSRDRDHPG 49
VAH CN STLG G RITRS DRD PG
Sbjct: 648 VAHACNPSTLGGRGGRITRSGDRDRPG 674
