miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32419_mmu-mir-1898:mirbase
          Length = 83

 Score =  105 bits (53), Expect = 5e-24
 Identities = 56/57 (98%)
 Strand = Plus / Plus

                                                                   
Query: 4  atgaacataggtcaaagttcacaggggatcaagaaatattattcttgtataatctgt 60
          ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3  atgaacataggtcaaggttcacaggggatcaagaaatattattcttgtataatctgt 59




>27312_eca-mir-1898:mirbase
          Length = 61

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 48/49 (97%)
 Strand = Plus / Plus

                                                           
Query: 12 aggtcaaagttcacaggggatcaagaaatattattcttgtataatctgt 60
          ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aggtcaaggttcacaggggatcaagaaatattattcttgtataatctgt 49