miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 79.8 bits (40), Expect = 8e-16
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| ||||||||||||| ||| ||||||| |||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 65
Query: 80 atcccacagtcctatc 95
|| |||||||||||||
Sbjct: 66 at-ccacagtcctatc 80
>51604_ptc-miR159c:pmrd
Length = 183
Score = 79.8 bits (40), Expect = 8e-16
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| ||||||||||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 80 atcccacagtcctatc 95
|| |||||||||||||
Sbjct: 71 at-ccacagtcctatc 85
>51602_ptc-miR159a:pmrd
Length = 183
Score = 79.8 bits (40), Expect = 8e-16
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| ||||||||||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 80 atcccacagtcctatc 95
|| |||||||||||||
Sbjct: 71 at-ccacagtcctatc 85
>54777_vvi-miR159c:pmrd
Length = 190
Score = 67.9 bits (34), Expect = 3e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| |||| ||||||| ||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 80 atcccacagtcctatccc 97
||||||||| ||||||||
Sbjct: 69 atcccacagccctatccc 86
>54378_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||| ||| |||| |||||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 80 atcccacagt 89
||||||||||
Sbjct: 62 atcccacagt 71
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 161 atccttgtttggattggagggagctctac 189
|||||| ||||||||| ||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||| ||| |||| |||||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 80 atcccacagt 89
||||||||||
Sbjct: 62 atcccacagt 71
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 161 atccttgtttggattggagggagctctac 189
|||||| ||||||||| ||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>48539_gma-miR159a:pmrd
Length = 214
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||| ||| |||| |||||| |||||||||||| |||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 80 atcccacagt 89
||||||||||
Sbjct: 81 atcccacagt 90
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 163 ccttgtttggattggagggagctctaca 190
|||| ||||||||| |||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197
>51603_ptc-miR159b:pmrd
Length = 187
Score = 56.0 bits (28), Expect = 1e-08
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagt-caatagagtttcttgctgggtatattgagctgcttggctatgg 79
|||||||||||||||| ||||||| || ||||||||| || |||||||| ||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 80 atcccacagtcctatc 95
||||||||| ||||||
Sbjct: 71 atcccacagccctatc 86
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 126 catatctcaggagcttcattacct 149
|||||||||||||||| |||||||
Sbjct: 119 catatctcaggagctttattacct 142
>48701_mtr-miR159c:pmrd
Length = 44
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 168 tttggattggagggagctctacatctt 194
||||||||| |||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacatctt 27
>48728_mtr-miR319b:pmrd
Length = 42
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ttggattggagggagctctacatctt 194
|||||||| |||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacatctt 26
>54931_zma-miR159b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 166 tgtttggattggagggagctctacatctt 194
||||||||||| |||||||||| ||||||
Sbjct: 180 tgtttggattgaagggagctctgcatctt 208
