miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6P423|MED23_XENLA Mediator of RNA polymerase II transcription
subunit 23 OS=Xenopus laevis GN=med23 PE=2 SV=1
Length = 1369
Score = 56.2 bits (134), Expect = 6e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 1 TQLIIFAFFQFVSFPSMVKSLHQKLSGRNLRKGRDRLM 114
+QLI F FQF SFP MV SLHQKL+GR L KGRD LM
Sbjct: 336 SQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLM 373
>sp|Q5EB59|MED23_RAT Mediator of RNA polymerase II transcription
subunit 23 OS=Rattus norvegicus GN=Med23 PE=2 SV=2
Length = 1367
Score = 56.2 bits (134), Expect = 6e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 1 TQLIIFAFFQFVSFPSMVKSLHQKLSGRNLRKGRDRLM 114
+QLI F FQF SFP MV SLHQKL+GR L KGRD LM
Sbjct: 336 SQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLM 373
>sp|Q80YQ2|MED23_MOUSE Mediator of RNA polymerase II transcription
subunit 23 OS=Mus musculus GN=Med23 PE=1 SV=2
Length = 1367
Score = 56.2 bits (134), Expect = 6e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 1 TQLIIFAFFQFVSFPSMVKSLHQKLSGRNLRKGRDRLM 114
+QLI F FQF SFP MV SLHQKL+GR L KGRD LM
Sbjct: 336 SQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLM 373
>sp|Q9ULK4|MED23_HUMAN Mediator of RNA polymerase II transcription
subunit 23 OS=Homo sapiens GN=MED23 PE=1 SV=2
Length = 1368
Score = 56.2 bits (134), Expect = 6e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 1 TQLIIFAFFQFVSFPSMVKSLHQKLSGRNLRKGRDRLM 114
+QLI F FQF SFP MV SLHQKL+GR L KGRD LM
Sbjct: 336 SQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLM 373
>sp|Q5RIW8|MED23_DANRE Mediator of RNA polymerase II transcription
subunit 23 OS=Danio rerio GN=med23 PE=2 SV=2
Length = 1376
Score = 56.2 bits (134), Expect = 6e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 1 TQLIIFAFFQFVSFPSMVKSLHQKLSGRNLRKGRDRLM 114
+QLI F FQF SFP MV SLHQKL+GR L KGRD LM
Sbjct: 336 SQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLM 373
>sp|Q9W1X7|MED23_DROME Mediator of RNA polymerase II transcription
subunit 23 OS=Drosophila melanogaster GN=MED23 PE=1 SV=1
Length = 1439
Score = 48.9 bits (115), Expect = 1e-05
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 1 TQLIIFAFFQFVSFPSMVKSLHQKLSGRNLRKGRDRLM 114
+QLI F FQFVSF +V +LH+KLS LRKGRD+LM
Sbjct: 343 SQLIYFVLFQFVSFMHIVLALHEKLSKLELRKGRDQLM 380
>sp|Q16HH9|MED23_AEDAE Mediator of RNA polymerase II transcription
subunit 23 OS=Aedes aegypti GN=MED23 PE=3 SV=1
Length = 1409
Score = 47.0 bits (110), Expect = 4e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 1 TQLIIFAFFQFVSFPSMVKSLHQKLSGRNLRKGRDRLM 114
+QLI F FQF +F ++V +LH KL+ NLR+GRD LM
Sbjct: 342 SQLIYFVLFQFATFQNIVNTLHDKLAVSNLRRGRDHLM 379
