miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28878_hsa-mir-566:mirbase
Length = 94
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 4 gtggtggcgggcgcctgtgatcccagctactcaggaggctggggcacgagagtcacttga 63
||||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||
Sbjct: 8 gtggtggcgggcgcctgtgatcccaactactcaggaggctggggcagcagaatcgcttga 67
Query: 64 acc 66
|||
Sbjct: 68 acc 70
>30505_ptr-mir-566:mirbase
Length = 93
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 4 gtggtggcgggcgcctgtgatcccagctactcaggaggctggggcacgagagtcacttga 63
||||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||
Sbjct: 7 gtggtggcgggcgcctgtgatcccaactactcaggaggctggggcagcagaatcgcttga 66
Query: 64 acc 66
|||
Sbjct: 67 acc 69
>31147_ppy-mir-566:mirbase
Length = 90
Score = 83.8 bits (42), Expect = 1e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 4 gtggtggcgggcgcctgtgatcccagctactcaggaggctggggca 49
||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4 gtggtggcgggcgcctgtgatcccaactactcaggaggctggggca 49
>31328_ppy-mir-1268:mirbase
Length = 52
Score = 50.1 bits (25), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 4 gtggtggcgggcgcctgtgatcccagctactcaggaggctg 44
||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 10 gtggtggtgggcgcctgtggtcccagctacttgggaggctg 50
>29116_hsa-mir-1268:mirbase
Length = 52
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 4 gtggtggcgggcgcctgtgatcccagctactcaggaggctg 44
||||||| ||| ||||||| ||||||||||| ||||||||
Sbjct: 10 gtggtggtgggggcctgtggtcccagctactttggaggctg 50
