miRNEST 2.0, an integrative microRNA resource :: BLAST
>48151_ath-miRf11051-akr:pmrd
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 19 actgtttgctgttggagcatcatcaagattcacaa 53
|||||| ||||||||||||||||||||||||||||
Sbjct: 5 actgttcgctgttggagcatcatcaagattcacaa 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgcagtggcaataagtggct 139
|||||||| |||||||||||||| ||||| |||||||
Sbjct: 96 tgagaatcttgatgatgctgcagctgcaatcagtggct 133
>47855_ath-miRf10755-akr:pmrd
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 19 actgtttgctgttggagcatcatcaagattcacaa 53
|||||| ||||||||||||||||||||||||||||
Sbjct: 129 actgttcgctgttggagcatcatcaagattcacaa 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 102 tgagaatcctgatgatgctgcagtggcaataagtggct 139
|||||||| |||||||||||||| ||||| |||||||
Sbjct: 38 tgagaatcttgatgatgctgcagctgcaatcagtggct 1
>47545_ath-miRf10445-akr:pmrd
Length = 131
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 19 actgtttgctgttggagcatcatcaagattcacaa 53
|||||| ||||||||||||||||||||||||||||
Sbjct: 4 actgttcgctgttggagcatcatcaagattcacaa 38
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgcagtggcaataagtggc 138
|||||||| |||||||||||||| ||||| ||||||
Sbjct: 95 tgagaatcttgatgatgctgcagctgcaatcagtggc 131
>46986_ath-miR172c:pmrd
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 19 actgtttgctgttggagcatcatcaagattcacaa 53
|||||| ||||||||||||||||||||||||||||
Sbjct: 5 actgttcgctgttggagcatcatcaagattcacaa 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgcagtggcaataagtggct 139
|||||||| |||||||||||||| ||||| |||||||
Sbjct: 96 tgagaatcttgatgatgctgcagctgcaatcagtggct 133
>51948_ptc-miRf10126-akr:pmrd
Length = 152
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 16 gtcactgtttgctgttggagcatcatcaagattcacaa 53
|||||||||||| | ||||||| |||||||||||||||
Sbjct: 1 gtcactgtttgccgatggagcaccatcaagattcacaa 38
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 100 attgagaatcctgatgatgctgcagtggcaataagtggc 138
|||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 114 attgggaatcttgatgatgctgcagcggcaataaatggc 152
>55046_zma-miR172m:pmrd
Length = 455
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 agaatcctgatgatgctgcagtgg 127
||||||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcagtgg 24
>54839_vvi-miR172c:pmrd
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 22 gtttgctgttggagcatcatcaagattcacaa 53
|||||| | |||||||||||||||||||||||
Sbjct: 1 gtttgcggatggagcatcatcaagattcacaa 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 105 gaatcctgatgatgctgcagtggcaataa 133
||||| |||||||||||||| ||||||||
Sbjct: 109 gaatcttgatgatgctgcagcggcaataa 137
>51903_ptc-miRf10081-akr:pmrd
Length = 147
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | ||||||||||||||||||||||
Sbjct: 5 tgtttgcgggtggagcatcatcaagattcaca 36
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgcagtggcaataa 133
|||||||| ||||||||||||| ||||||||
Sbjct: 112 tgagaatcttgatgatgctgcatcggcaataa 143
>51699_ptc-miR172b:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | ||||||||||||||||||||||
Sbjct: 2 tgtttgcgggtggagcatcatcaagattcaca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgcagtggcaataa 133
|||||||| ||||||||||||| ||||||||
Sbjct: 109 tgagaatcttgatgatgctgcatcggcaataa 140
>51344_ppd-miR172b:pmrd
Length = 139
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | ||||||||||||||||||||||
Sbjct: 138 tgtttgcgggtggagcatcatcaagattcaca 107
>53842_ptc-miRf12020-akr:pmrd
Length = 136
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggagcatcatcaagattcacaa 53
|||||||||||||||||||||||
Sbjct: 8 tggagcatcatcaagattcacaa 30
>52375_ptc-miRf10553-akr:pmrd
Length = 136
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggagcatcatcaagattcacaa 53
|||||||||||||||||||||||
Sbjct: 8 tggagcatcatcaagattcacaa 30
>51704_ptc-miR172g:pmrd
Length = 143
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggagcatcatcaagattcacaa 53
|||||||||||||||||||||||
Sbjct: 12 tggagcatcatcaagattcacaa 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 100 attgagaatcctgatgatgctgcagtggcaataa 133
|||| ||||| |||||||||||||| ||||||||
Sbjct: 110 attgggaatcttgatgatgctgcagcggcaataa 143
>51343_ppd-miR172a:pmrd
Length = 139
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 22 gtttgctgttggagcatcatcaagattcaca 52
|||||| | ||||||||||||||||||||||
Sbjct: 1 gtttgcgggtggagcatcatcaagattcaca 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgcagtggcaataa 133
|||||||| ||||||||||||| ||||||||
Sbjct: 107 tgagaatcttgatgatgctgcatcggcaataa 138
>46987_ath-miR172d:pmrd
Length = 124
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 101 ttgagaatcctgatgatgctgcagtggcaat 131
||||||||| |||||||||||||| ||||||
Sbjct: 85 ttgagaatcttgatgatgctgcagcggcaat 115
>54755_tca-miR172:pmrd
Length = 240
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 agaatcctgatgatgctgcagt 125
||||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcagt 22
>54641_sof-miR172a:pmrd
Length = 300
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 279 gagaatcctgatgatgctgcag 300
>52845_ptc-miRf11023-akr:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tggagcatcatcaagattcaca 52
||||||||||||||||||||||
Sbjct: 8 tggagcatcatcaagattcaca 29
>51705_ptc-miR172h:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 20 ctgtttgctgttggagcatcatcaagattcacaa 53
|||||||| | ||||||| |||||||||||||||
Sbjct: 1 ctgtttgccgatggagcaccatcaagattcacaa 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 100 attgagaatcctgatgatgctgcagtggcaataa 133
|||| ||||| |||||||||||||| ||||||||
Sbjct: 110 attgggaatcttgatgatgctgcagcggcaataa 143
>51549_psi-miR172:pmrd
Length = 68
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgca 123
||||||||||||||||||||||
Sbjct: 46 tgagaatcctgatgatgctgca 67
>51337_pga-miR172:pmrd
Length = 248
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgca 123
||||||||||||||||||||||
Sbjct: 226 tgagaatcctgatgatgctgca 247
>48913_osa-miR172p:pmrd
Length = 318
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 297 gagaatcctgatgatgctgcag 318
>48911_osa-miR172n:pmrd
Length = 62
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 41 gagaatcctgatgatgctgcag 62
>48910_osa-miR172m:pmrd
Length = 297
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 276 gagaatcctgatgatgctgcag 297
>48667_hvv-miR172d:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 251 gagaatcctgatgatgctgcag 272
>48666_hvv-miR172c:pmrd
Length = 137
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 100 gagaatcctgatgatgctgcag 121
>48665_hvv-miR172b:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 69 gagaatcctgatgatgctgcag 90
>48664_hvv-miR172a:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 234 gagaatcctgatgatgctgcag 255
>48314_bdi-miR172d:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgcag 124
||||||||||||||||||||||
Sbjct: 71 gagaatcctgatgatgctgcag 92
>55047_zma-miR172n:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgca 123
|||||||||||||||||||||
Sbjct: 60 gagaatcctgatgatgctgca 80
>54684_tae-miR172b:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 agaatcctgatgatgctgcag 124
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>54683_tae-miR172a:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 agaatcctgatgatgctgcag 124
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>54467_sbi-miR172e:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 24 ttgctgttggagcatcatcaagattcaca 52
|||||| || |||||||||||||||||||
Sbjct: 102 ttgctggtgcagcatcatcaagattcaca 74
>54466_sbi-miR172d:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 21 tgtttgctgttggagcatcatcaagattc 49
||||||||| || ||||||||||||||||
Sbjct: 102 tgtttgctgatgcagcatcatcaagattc 74
>52946_ptc-miRf11124-akr:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtcactgtttgctgttggagcatcatcaagattcaca 52
|||| ||||||| | || |||||||||||||||||||
Sbjct: 1 gtcattgtttgcaggtgcagcatcatcaagattcaca 37
>51706_ptc-miR172i:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 103 gagaatcctgatgatgctgca 123
|||||||||||||||||||||
Sbjct: 96 gagaatcctgatgatgctgca 116
>50311_osa-miRf11096-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tttgctgttggagcatcatcaagattcac 51
||||||| || ||||||||||||||||||
Sbjct: 10 tttgctggtgcagcatcatcaagattcac 38
>48912_osa-miR172o:pmrd
Length = 53
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 agaatcctgatgatgctgcag 124
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>48908_osa-miR172c:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 23 tttgctgttggagcatcatcaagattcac 51
||||||| || ||||||||||||||||||
Sbjct: 108 tttgctggtgcagcatcatcaagattcac 80
>46989_ath-miR172m:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 agaatcctgatgatgctgcag 124
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>54838_vvi-miR172b:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 101 ttgagaatcctgatgatgctgcagtggcaata 132
||||||||| ||||||||||||| |||||||
Sbjct: 32 ttgagaatcttgatgatgctgcatcggcaata 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | || |||||||||||||||||||
Sbjct: 117 tgtttgcaggtgtagcatcatcaagattcaca 86
>51947_ptc-miRf10125-akr:pmrd
Length = 136
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | || |||||||||||||||||||
Sbjct: 5 tgtttgcaggtgcagcatcatcaagattcaca 36
>51703_ptc-miR172f:pmrd
Length = 161
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 102 tgagaatcctgatgatgctgcagtggcaataa 133
|||||||| ||||||||||||| ||||||||
Sbjct: 130 tgagaatcttgatgatgctgcatcggcaataa 161
>51700_ptc-miR172c:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | || |||||||||||||||||||
Sbjct: 2 tgtttgcaggtgcagcatcatcaagattcaca 33
>51698_ptc-miR172a:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | || |||||||||||||||||||
Sbjct: 2 tgtttgcaggtgcagcatcatcaagattcaca 33
>49516_osa-miRf10301-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 22 gtttgctgttggagcatcatcaagattc 49
|||||||| || ||||||||||||||||
Sbjct: 115 gtttgctgatgcagcatcatcaagattc 88
>48909_osa-miR172d:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 22 gtttgctgttggagcatcatcaagattc 49
|||||||| || ||||||||||||||||
Sbjct: 119 gtttgctgatgcagcatcatcaagattc 92
>48571_gma-miR172b:pmrd
Length = 153
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 21 tgtttgctgttggagcatcatcaagattcaca 52
||||||| | || |||||||||||||||||||
Sbjct: 12 tgtttgcggatgtagcatcatcaagattcaca 43
