miRNEST 2.0, an integrative microRNA resource :: BLAST
>41050_ghr-MIR172:mirbase
Length = 125
Score = 248 bits (125), Expect = 1e-66
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 16 agtcactgtttgctgttggagcatcatcaagattcacaattttagggttcttttttgatt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtcactgtttgctgttggagcatcatcaagattcacaattttagggttcttttttgatt 60
Query: 76 gatttgatcaatcagcctttttatgattgagaatcctgatgatgctgcagtggcaataag 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatttgatcaatcagcctttttatgattgagaatcctgatgatgctgcagtggcaataag 120
Query: 136 tggct 140
|||||
Sbjct: 121 tggct 125
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 14 acagtcactgtttgctgttggagcatcatcaagattcacaa 54
||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 acagtcactgtttgctgatggagcatcatcaagattcacaa 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 106 gaatcctgatgatgctgcagtggcaataagtggctaaat 144
||||| |||||||||||||| |||||||| |||||||||
Sbjct: 116 gaatcttgatgatgctgcagcggcaataaatggctaaat 154
>40462_gma-MIR172e:mirbase
Length = 153
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 13 aacagtcactgtttgctgttggagcatcatcaagattcacaa 54
|||||||||||||||| | |||||||||||||||||||||||
Sbjct: 3 aacagtcactgtttgccggtggagcatcatcaagattcacaa 44
>40460_gma-MIR172c:mirbase
Length = 153
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 cagtcactgtttgctgttggagcatcatcaagattcacaa 54
|||||||||||||| | |||||||||||||||||||||||
Sbjct: 5 cagtcactgtttgccggtggagcatcatcaagattcacaa 44
>40065_ath-MIR172c:mirbase
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 20 actgtttgctgttggagcatcatcaagattcacaa 54
|||||| ||||||||||||||||||||||||||||
Sbjct: 5 actgttcgctgttggagcatcatcaagattcacaa 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgcagtggcaataagtggct 140
|||||||| |||||||||||||| ||||| |||||||
Sbjct: 96 tgagaatcttgatgatgctgcagctgcaatcagtggct 133
>39854_aly-MIR172c:mirbase
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 20 actgtttgctgttggagcatcatcaagattcacaa 54
|||||| ||||||||||||||||||||||||||||
Sbjct: 5 actgttcgctgttggagcatcatcaagattcacaa 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgcagtggcaataagtggct 140
|||||||| |||||||||||||| ||||| |||||||
Sbjct: 96 tgagaatcttgatgatgctgcagctgcaatcagtggct 133
>41235_csi-MIR172c:mirbase
Length = 163
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 20 actgtttgctgttggagcatcatcaagattcacaa 54
||||||||| ||||||||| |||||||||||||||
Sbjct: 1 actgtttgcagttggagcaccatcaagattcacaa 35
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 106 gaatcctgatgatgctgcagtggcaataagtggctaaat 144
||||| |||||||||||||| || ||||||||||||||
Sbjct: 121 gaatcttgatgatgctgcagcagcgataagtggctaaat 159
>41127_tcc-MIR172d:mirbase
Length = 129
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgcagtggcaataagtggcta 141
|||||||||||||||||||||| ||||||| | ||||||
Sbjct: 87 tgagaatcctgatgatgctgcattggcaatgaatggcta 125
>40461_gma-MIR172d:mirbase
Length = 150
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 13 aacagtcactgtttgctgttggagcatcatcaagattcacaa 54
||||||| ||| |||| | |||||||||||||||||||||||
Sbjct: 3 aacagtcgctgattgcagatggagcatcatcaagattcacaa 44
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 23 gtttgctgttggagcatcatcaagattcacaa 54
|||||| | |||||||||||||||||||||||
Sbjct: 1 gtttgcggatggagcatcatcaagattcacaa 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 106 gaatcctgatgatgctgcagtggcaataa 134
||||| |||||||||||||| ||||||||
Sbjct: 109 gaatcttgatgatgctgcagcggcaataa 137
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 22 tgtttgctgttggagcatcatcaagattcaca 53
||||||| | ||||||||||||||||||||||
Sbjct: 2 tgtttgcgggtggagcatcatcaagattcaca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgcagtggcaataa 134
|||||||| ||||||||||||| ||||||||
Sbjct: 109 tgagaatcttgatgatgctgcatcggcaataa 140
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tggagcatcatcaagattcacaa 54
|||||||||||||||||||||||
Sbjct: 12 tggagcatcatcaagattcacaa 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 101 attgagaatcctgatgatgctgcagtggcaataa 134
|||| ||||| |||||||||||||| ||||||||
Sbjct: 110 attgggaatcttgatgatgctgcagcggcaataa 143
>40702_mtr-MIR172:mirbase
Length = 113
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgcag 125
|||||||||||||||||||||||
Sbjct: 86 tgagaatcctgatgatgctgcag 108
>40366_rco-MIR172:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tggagcatcatcaagattcacaa 54
|||||||||||||||||||||||
Sbjct: 5 tggagcatcatcaagattcacaa 27
>40066_ath-MIR172d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 102 ttgagaatcctgatgatgctgcagtggcaat 132
||||||||| |||||||||||||| ||||||
Sbjct: 85 ttgagaatcttgatgatgctgcagcggcaat 115
>39855_aly-MIR172d:mirbase
Length = 163
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 102 ttgagaatcctgatgatgctgcagtggcaat 132
||||||||| |||||||||||||| ||||||
Sbjct: 109 ttgagaatcttgatgatgctgcagcggcaat 139
>42562_sbi-MIR172f:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgca 124
||||||||||||||||||||||
Sbjct: 96 tgagaatcctgatgatgctgca 117
>41769_bdi-MIR172d:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 gagaatcctgatgatgctgcag 125
||||||||||||||||||||||
Sbjct: 71 gagaatcctgatgatgctgcag 92
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 ctgtttgctgttggagcatcatcaagattcacaa 54
|||||||| | ||||||| |||||||||||||||
Sbjct: 1 ctgtttgccgatggagcaccatcaagattcacaa 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 101 attgagaatcctgatgatgctgcagtggcaataa 134
|||| ||||| |||||||||||||| ||||||||
Sbjct: 110 attgggaatcttgatgatgctgcagcggcaataa 143
>42561_sbi-MIR172e:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 25 ttgctgttggagcatcatcaagattcaca 53
|||||| || |||||||||||||||||||
Sbjct: 102 ttgctggtgcagcatcatcaagattcaca 74
>41992_osa-MIR172c:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 24 tttgctgttggagcatcatcaagattcac 52
||||||| || ||||||||||||||||||
Sbjct: 108 tttgctggtgcagcatcatcaagattcac 80
>41403_ptc-MIR172i:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 gagaatcctgatgatgctgca 124
|||||||||||||||||||||
Sbjct: 96 gagaatcctgatgatgctgca 116
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 22 tgtttgctgttggagcatcatcaagattc 50
||||||||| || ||||||||||||||||
Sbjct: 152 tgtttgctgatgcagcatcatcaagattc 124
>39852_aly-MIR172a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 21 ctgtttgctgttggagcatcatcaagattcaca 53
|||||||||| || ||||||||||||||||||
Sbjct: 14 ctgtttgctgctgtggcatcatcaagattcaca 46
>41993_osa-MIR172d:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 23 gtttgctgttggagcatcatcaagattc 50
|||||||| || ||||||||||||||||
Sbjct: 119 gtttgctgatgcagcatcatcaagattc 92
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 102 ttgagaatcctgatgatgctgcagtggcaata 133
||||||||| ||||||||||||| |||||||
Sbjct: 32 ttgagaatcttgatgatgctgcatcggcaata 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 22 tgtttgctgttggagcatcatcaagattcaca 53
||||||| | || |||||||||||||||||||
Sbjct: 117 tgtttgcaggtgtagcatcatcaagattcaca 86
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgcagtggcaataa 134
|||||||| ||||||||||||| ||||||||
Sbjct: 130 tgagaatcttgatgatgctgcatcggcaataa 161
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 22 tgtttgctgttggagcatcatcaagattcaca 53
||||||| | || |||||||||||||||||||
Sbjct: 2 tgtttgcaggtgcagcatcatcaagattcaca 33
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 22 tgtttgctgttggagcatcatcaagattcaca 53
||||||| | || |||||||||||||||||||
Sbjct: 2 tgtttgcaggtgcagcatcatcaagattcaca 33
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 22 tgtttgctgttggagcatcatcaagattcaca 53
||||||| | || |||||||||||||||||||
Sbjct: 12 tgtttgcgggtgtagcatcatcaagattcaca 43
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 103 tgagaatcctgatgatgctgcagtggcaataa 134
|||||||| ||||||||||||| ||||||||
Sbjct: 147 tgagaatcttgatgatgctgcatcggcaataa 178
>40459_gma-MIR172b:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 22 tgtttgctgttggagcatcatcaagattcaca 53
||||||| | || |||||||||||||||||||
Sbjct: 12 tgtttgcggatgtagcatcatcaagattcaca 43
