miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00017;Metazoa_SRP;ABRT010113572.1/1241-957 9478:Tarsius
syrichta (Philippine tarsier)
Length = 285
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| ||||||||||
Sbjct: 43 tcccaaagtgctaggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01209199.1/33151-32869 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| ||||||||||
Sbjct: 43 tcccaaagtgctaggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AACZ02199057.1/3306-3565 9598:Pan troglodytes
(chimpanzee)
Length = 260
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||||||||||||
Sbjct: 186 tcccaaagtgctgggattacaagtgtgagcca 155
>RF00017;Metazoa_SRP;AADC01067628.1/21018-20736 9606:Homo sapiens
(human)
Length = 283
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| ||||||||||
Sbjct: 43 tcccaaagtgctaggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AANU01289442.1/905-623 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| ||||||||||
Sbjct: 43 tcccaaagtgctaggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AANU01129311.1/41438-41767 9544:Macaca mulatta
(rhesus monkey)
Length = 330
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagc 30
||||||||||||||||||||| ||||||||
Sbjct: 256 tcccaaagtgctaggattacaggtgtgagc 227
>RF00017;Metazoa_SRP;AC216066.3/52272-52554 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagccat 33
|||||||||||| |||||||||| |||||||||
Sbjct: 43 tcccaaagtgctgggattacaagcgtgagccat 11
>RF00019;Y_RNA;ABBA01074574.1/18072-17963 9606:Homo sapiens
(human)
Length = 110
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 tcccaaagtgctaggattacaagtgtgagccat 33
|||||||||||| |||||||| |||||||||||
Sbjct: 9 tcccaaagtgctgggattacaggtgtgagccat 41
>RF00017;Metazoa_SRP;ABGA01089872.1/3114-3415 9601:Pongo abelii
(Sumatran orangutan)
Length = 302
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01090368.1/220-498 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 205 tcccaaagtgctgggattacaggtgtgagcca 174
>RF00017;Metazoa_SRP;ABGA01319971.1/6088-5802 9601:Pongo abelii
(Sumatran orangutan)
Length = 287
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 213 tcccaaagtgctaggattacaggcgtgagcca 182
>RF00017;Metazoa_SRP;ABGA01147220.1/1143-842 9601:Pongo abelii
(Sumatran orangutan)
Length = 302
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01271553.1/7493-7774 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 43 tcccaaagtgctaggattacaggcgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01143292.1/8144-7861 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||| ||||||||
Sbjct: 210 tcccaaagtgctgggattacaagcgtgagcca 179
>RF00017;Metazoa_SRP;ABGA01166513.1/11533-11814 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 247 tcccaaagtgctgggattacaggtgtgagcca 216
>RF00017;Metazoa_SRP;ABGA01095204.1/17559-17841 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01120352.1/1652-1932 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01251873.1/10297-10016 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 43 tcccaaagtgctaggattacaggcgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01207861.1/159-440 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01348885.1/2765-2463 9601:Pongo abelii
(Sumatran orangutan)
Length = 303
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01273653.1/39579-39861 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 43 tcccaaagtgctaggattacaggcgtgagcca 12
>RF00017;Metazoa_SRP;ABGA01341619.1/1974-1690 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 203 tcccaaagtgctaggattacaggcgtgagcca 172
>RF00017;Metazoa_SRP;AACZ02022405.1/115343-115647 9598:Pan
troglodytes (chimpanzee)
Length = 305
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AACZ02075603.1/13997-14269 9598:Pan
troglodytes (chimpanzee)
Length = 273
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADA01114365.1/10273-10550 9598:Pan
troglodytes (chimpanzee)
Length = 278
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADA01237794.1/7047-7329 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AACZ02029591.1/18400-18108 9598:Pan
troglodytes (chimpanzee)
Length = 293
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AACZ02216483.1/5974-6256 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADA01287062.1/1386-1114 9598:Pan troglodytes
(chimpanzee)
Length = 273
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 256 tcccaaagtgctgggattacaggtgtgagcca 225
>RF00017;Metazoa_SRP;AACZ02097107.1/62205-62508 9598:Pan
troglodytes (chimpanzee)
Length = 304
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||| ||||||||
Sbjct: 43 tcccaaagtgctgggattacaagcgtgagcca 12
>RF00017;Metazoa_SRP;AADA01196114.1/23385-23104 9598:Pan
troglodytes (chimpanzee)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgcttggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADA01042910.1/14375-14659 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 211 tcccaaagtgctgggattacaggtgtgagcca 180
>RF00017;Metazoa_SRP;AADA01322483.1/12649-12317 9598:Pan troglodytes
(chimpanzee)
Length = 333
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 256 tcccaaagtgctaggattacaggcgtgagcca 225
>RF00017;Metazoa_SRP;AADA01252628.1/3222-2940 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||| ||||||||
Sbjct: 43 tcccaaagtgctgggattacaagcgtgagcca 12
>RF00017;Metazoa_SRP;AADA01114687.1/1497-1213 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AACZ02020289.1/722-436 9598:Pan troglodytes
(chimpanzee)
Length = 287
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 43 tcccaaagtgctaggattacaggcgtgagcca 12
>RF00017;Metazoa_SRP;AC109912.10/23323-23605 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgcttggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AL162586.26/43059-42783 9606:Homo sapiens
(human)
Length = 277
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABSL01001191.1/56920-56643 9606:Homo sapiens
(human)
Length = 278
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADD01177100.1/3336-3595 9606:Homo sapiens
(human)
Length = 260
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||| ||||||||
Sbjct: 186 tcccaaagtgctgggattacaagcgtgagcca 155
>RF00017;Metazoa_SRP;AADC01140716.1/637-364 9606:Homo sapiens
(human)
Length = 274
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 257 tcccaaagtgctgggattacatgtgtgagcca 226
>RF00017;Metazoa_SRP;AADB02020275.1/4438338-4438615 9606:Homo
sapiens (human)
Length = 278
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AC008950.4/17833-18114 9606:Homo sapiens
(human)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AL117344.12/53999-53717 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADB02328392.1/351-633 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADC01047521.1/166550-166837 9606:Homo
sapiens (human)
Length = 288
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABBA01040515.1/51133-50850 9606:Homo sapiens
(human)
Length = 284
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADB02036916.1/602388-602106 9606:Homo
sapiens (human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADB02019970.1/70486-70770 9606:Homo sapiens
(human)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABBA01002822.1/12713-12997 9606:Homo sapiens
(human)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADB02020074.1/271286-271574 9606:Homo sapiens
(human)
Length = 289
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||| |||| |||||||||||||||||||
Sbjct: 242 tcccaaaatgctgggattacaagtgtgagcca 211
>RF00017;Metazoa_SRP;AADB02020239.1/376033-376314 9606:Homo
sapiens (human)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABBA01016899.1/154829-155109 9606:Homo
sapiens (human)
Length = 281
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABBA01008412.1/14888-14606 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;ABSL01078325.1/1316-1039 9606:Homo sapiens
(human)
Length = 278
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 256 tcccaaagtgctgggattacatgtgtgagcca 225
>RF00017;Metazoa_SRP;AADC01132091.1/2625-2347 9606:Homo sapiens
(human)
Length = 279
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 205 tcccaaagtgctgggattacaggtgtgagcca 174
>RF00017;Metazoa_SRP;ABSL01064553.1/16809-16511 9606:Homo sapiens
(human)
Length = 299
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADB02006705.1/5374-5657 9606:Homo sapiens
(human)
Length = 284
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADB02009732.1/81584-81866 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AADC01050253.1/3525-3807 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||| ||||||||
Sbjct: 43 tcccaaagtgctgggattacaagcgtgagcca 12
>RF00017;Metazoa_SRP;ABSL01062394.1/28154-28435 9606:Homo sapiens
(human)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AC068675.17/76187-76471 9606:Homo sapiens
(human)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||| ||||||||
Sbjct: 43 tcccaaagtgctgggattacaagcgtgagcca 12
>RF00017;Metazoa_SRP;CABD01077192.1/408-93 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 316
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||| |||| |||||||||||||||||||
Sbjct: 242 tcccaaaatgctgggattacaagtgtgagcca 211
>RF00017;Metazoa_SRP;CABD01037784.1/2910-2630 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 281
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;CABD01032539.1/6244-6528 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;CABD01226642.1/806-514 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 293
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;CABD01032836.1/10594-10876 9595:Gorilla
gorilla gorilla (Western lowland gorilla)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||||| ||||||||
Sbjct: 43 tcccaaagtgctgggattacaagggtgagcca 12
>RF00017;Metazoa_SRP;CABD01796787.2/1028-1330 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 303
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;CABD01013935.1/10958-10676 9595:Gorilla
gorilla gorilla (Western lowland gorilla)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;CABD01098373.1/4907-5189 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 43 tcccaaagtgctaggattacaggcgtgagcca 12
>RF00017;Metazoa_SRP;CABD01218307.1/2743-3027 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;CABD01580862.2/207-489 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AANU01216321.1/19923-20208 9544:Macaca
mulatta (rhesus monkey)
Length = 286
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AANU01052618.1/434-710 9544:Macaca mulatta
(rhesus monkey)
Length = 277
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 203 tcccaaagtgctgggattacaggtgtgagcca 172
>RF00017;Metazoa_SRP;AANU01271722.1/20306-20588 9544:Macaca
mulatta (rhesus monkey)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AANU01292852.1/19895-20182 9544:Macaca
mulatta (rhesus monkey)
Length = 288
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AANU01192641.1/45177-45458 9544:Macaca
mulatta (rhesus monkey)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AC210181.5/143169-143450 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||||||||||||||| | ||||||||
Sbjct: 43 tcccaaagtgctaggattacaggcgtgagcca 12
>RF00017;Metazoa_SRP;AANU01197377.1/9650-9932 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 43 tcccaaagtgctgggattacaggtgtgagcca 12
>RF00017;Metazoa_SRP;AC148707.1/58283-58573 9544:Macaca mulatta
(rhesus monkey)
Length = 291
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||| ||||||||||||| ||||||||||
Sbjct: 43 tcccaaaatgctaggattacaggtgtgagcca 12
>RF00100;7SK;ABDC01021515.1/1869-2225 30608:Microcebus murinus (gray
mouse lemur)
Length = 357
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||| ||||||||||||||||| ||||||||
Sbjct: 244 tcccagagtgctaggattacaagcgtgagcca 213
>RF00030;RNase_MRP;AACZ02115142.1/1641-1422 9598:Pan troglodytes
(chimpanzee)
Length = 220
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 101 tcccaaagtgctgggattacaggtgtgagcca 132
>RF00030;RNase_MRP;AC022400.9/107252-107033 9606:Homo sapiens
(human)
Length = 220
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 101 tcccaaagtgctgggattacaggtgtgagcca 132
>RF00030;RNase_MRP;CABD01007613.1/333-727 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 395
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 276 tcccaaagtgctgggattacaggtgtgagcca 307
>RF00019;Y_RNA;ABGA01011569.1/1361-1466 9601:Pongo abelii
(Sumatran orangutan)
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 5 tcccaaagtgctgggattacaggtgtgagcca 36
>RF00019;Y_RNA;AANU01267663.1/13684-13579 9544:Macaca mulatta
(rhesus monkey)
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
|||||||||||| |||||||| ||||||||||
Sbjct: 5 tcccaaagtgctgggattacaggtgtgagcca 36
>RF00015;U4;AANU01152217.1/630-753 9544:Macaca mulatta (rhesus
monkey)
Length = 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagcca 32
||||||||| ||||||||||| ||||||||||
Sbjct: 118 tcccaaagtactaggattacaggtgtgagcca 87
>RF00017;Metazoa_SRP;AACZ02134052.1/6279-6003 9598:Pan troglodytes
(chimpanzee)
Length = 277
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2 cccaaagtgctaggattacaagtgtgagcca 32
||||||||||| |||||||| ||||||||||
Sbjct: 203 cccaaagtgctgggattacaggtgtgagcca 173
>RF00100;7SK;ABGA01125390.1/2551-2232 9601:Pongo abelii (Sumatran
orangutan)
Length = 320
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2 cccaaagtgctaggattacaagtgtgagcca 32
||||||||||| |||||||| ||||||||||
Sbjct: 294 cccaaagtgctgggattacaggtgtgagcca 264
>RF00030;RNase_MRP;ABGA01166340.1/2139-2306 9601:Pongo abelii
(Sumatran orangutan)
Length = 168
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tcccaaagtgctaggattacaagtgtgagcc 31
|||||||||||| |||||||| |||||||||
Sbjct: 48 tcccaaagtgctgggattacaggtgtgagcc 78
>RF00017;Metazoa_SRP;CABD01782015.1/385-99 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 287
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 tcccaaagtgctaggattacaagtgtgagc 30
|||||||||||| |||||||| ||||||||
Sbjct: 213 tcccaaagtgctgggattacaggtgtgagc 184
>RF00017;Metazoa_SRP;CABD01055304.1/3176-3473 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 298
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 5 aaagtgctaggattacaagtgtgagccatg 34
|||||||| |||||||| ||||||||||||
Sbjct: 298 aaagtgctgggattacaggtgtgagccatg 269
>RF00015;U4;ABDC01247230.1/1613-1369 30608:Microcebus murinus (gray
mouse lemur)
Length = 245
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 agtgctaggattacaagtgtgagcca 32
||||||||||||||| ||||||||||
Sbjct: 114 agtgctaggattacaggtgtgagcca 89
