miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q96CB5|CH044_HUMAN Putative uncharacterized protein C8orf44
OS=Homo sapiens GN=C8orf44 PE=2 SV=2
Length = 159
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -3
Query: 95 GQGGQIKSSESAWPTW*NPISTKNTKIAR 9
G+ +++SS+ AWPTW NPI TKNTKI++
Sbjct: 54 GRSPEVRSSKPAWPTWRNPIFTKNTKISQ 82
Score = 31.6 bits (70), Expect(2) = 1e-07
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 136 QVRWLTLVILALWEAKVGRS 77
+ RWL VI ALWEAK GRS
Sbjct: 37 RARWLMPVIPALWEAKAGRS 56
>sp|Q96N38|ZN714_HUMAN Zinc finger protein 714 OS=Homo sapiens
GN=ZNF714 PE=2 SV=1
Length = 555
Score = 40.4 bits (93), Expect(2) = 9e-07
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -1
Query: 91 KVGRSRVQNQLGQHGETPSLLKIQK*PG 8
++ RS VQ+Q GQHG+TPSLLKIQK G
Sbjct: 522 QIARSGVQDQPGQHGKTPSLLKIQKFAG 549
Score = 31.6 bits (70), Expect(2) = 9e-07
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 134 GAVAHTCNPSTLGGQGGQIKSS 69
G VAH CNP+TL G G QI S
Sbjct: 505 GMVAHACNPNTLRGLGEQIARS 526
>sp|Q8N976|YG039_HUMAN Putative uncharacterized protein FLJ38264
OS=Homo sapiens PE=5 SV=1
Length = 141
Score = 37.0 bits (84), Expect(2) = 9e-05
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +1
Query: 16 IFVFLVEMGFHHVGQADSELL 78
IFVFLVE GFHHVG A ELL
Sbjct: 37 IFVFLVETGFHHVGHAGLELL 57
Score = 28.1 bits (61), Expect(2) = 9e-05
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 78 DLPTLASQSARITSVSHR 131
D PTLAS+SA IT +SHR
Sbjct: 61 DPPTLASRSAGITGMSHR 78
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q63692|CDC37_RAT Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus
GN=Cdc37 PE=1 SV=2
Length = 379
Score = 89.7 bits (221), Expect = 5e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 47 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM
Sbjct: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 40
>sp|Q61081|CDC37_MOUSE Hsp90 co-chaperone Cdc37 OS=Mus musculus
GN=Cdc37 PE=2 SV=1
Length = 379
Score = 89.7 bits (221), Expect = 5e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 47 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM
Sbjct: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 40
>sp|Q16543|CDC37_HUMAN Hsp90 co-chaperone Cdc37 OS=Homo sapiens
GN=CDC37 PE=1 SV=1
Length = 378
Score = 89.7 bits (221), Expect = 5e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 47 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM
Sbjct: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 40
>sp|O57476|CDC37_CHICK Hsp90 co-chaperone Cdc37 OS=Gallus gallus
GN=CDC37 PE=2 SV=1
Length = 393
Score = 89.7 bits (221), Expect = 5e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 47 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM
Sbjct: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 40
>sp|Q5EAC6|CDC37_BOVIN Hsp90 co-chaperone Cdc37 OS=Bos taurus
GN=CDC37 PE=2 SV=1
Length = 380
Score = 89.7 bits (221), Expect = 5e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 47 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM
Sbjct: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 40
>sp|Q9DGQ7|CDC37_TETFL Hsp90 co-chaperone Cdc37 OS=Tetraodon
fluviatilis GN=cdc37 PE=3 SV=1
Length = 377
Score = 81.3 bits (199), Expect = 2e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 50 VDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
+DYSVWDHIEVSDDED +HPNIDT SLFRWRHQARVERM
Sbjct: 4 IDYSVWDHIEVSDDEDVSHPNIDTPSLFRWRHQARVERM 42
>sp|Q24740|CDC37_DROVI Hsp90 co-chaperone Cdc37 OS=Drosophila
virilis GN=Cdc37 PE=3 SV=1
Length = 399
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2
Query: 47 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
MVDYS W +IE+SDDEDETHPNIDT SLFRWRHQARVERM
Sbjct: 1 MVDYSKWKNIEISDDEDETHPNIDTPSLFRWRHQARVERM 40
>sp|Q24276|CDC37_DROME Hsp90 co-chaperone Cdc37 OS=Drosophila
melanogaster GN=Cdc37 PE=1 SV=1
Length = 389
Score = 78.6 bits (192), Expect = 1e-14
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2
Query: 47 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
MVDYS W +IE+SDDED+THPNIDT SLFRWRHQARVERM
Sbjct: 1 MVDYSKWKNIEISDDEDDTHPNIDTPSLFRWRHQARVERM 40
>sp|O02108|CDC37_CAEEL Probable Hsp90 co-chaperone cdc37
OS=Caenorhabditis elegans GN=cdc-37 PE=1 SV=1
Length = 370
Score = 74.7 bits (182), Expect = 2e-13
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 50 VDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERM 166
+DYS W IEVSDDED+THPNIDT SLFRWRHQAR+ERM
Sbjct: 3 IDYSKWKDIEVSDDEDDTHPNIDTPSLFRWRHQARLERM 41
>sp|A6NIL8|YP041_HUMAN Putative CDC37-like protein ENSP00000350273
OS=Homo sapiens PE=5 SV=1
Length = 233
Score = 47.8 bits (112), Expect(2) = 1e-07
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2
Query: 80 VSDDEDETHPNIDTASLFRWRHQARVERM 166
+SDDE+E HPN A+LFRW+HQARVE M
Sbjct: 34 LSDDEEERHPNTHRANLFRWQHQARVELM 62
Score = 26.9 bits (58), Expect(2) = 1e-07
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 36 AKARWWTTACGTTL 77
A+A+ WTTACG TL
Sbjct: 21 AEAKCWTTACGATL 34
>sp|Q8X1E6|CDC37_CANAL Hsp90 co-chaperone Cdc37 OS=Candida albicans
GN=CDC37 PE=3 SV=1
Length = 508
Score = 50.1 bits (118), Expect = 4e-06
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 5/43 (11%)
Frame = +2
Query: 50 VDYSVWDHIEVSDDED-ETHPNIDTASLFRWR----HQARVER 163
+DYS WD IE+SDD D E HPN+D S RW+ H+ R++R
Sbjct: 3 IDYSKWDKIEISDDSDVEVHPNVDKQSFIRWKQRDIHEKRMQR 45
>sp|P06101|CDC37_YEAST Hsp90 co-chaperone Cdc37 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CDC37 PE=1
SV=2
Length = 506
Score = 47.8 bits (112), Expect = 2e-05
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 50 VDYSVWDHIEVSDDED-ETHPNIDTASLFRWRHQA 151
+DYS WD IE+SDD D E HPN+D S +W+ Q+
Sbjct: 3 IDYSKWDKIELSDDSDVEVHPNVDKKSFIKWKQQS 37
>sp|O94740|CDC37_SCHPO Hsp90 co-chaperone Cdc37
OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972)
GN=cdc37 PE=1 SV=1
Length = 466
Score = 47.8 bits (112), Expect = 2e-05
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Frame = +2
Query: 50 VDYSVWDHIEVSDDED-ETHPNIDTASLFRWR----HQARVER 163
+DYS WD +E+SDD D E HPN+D S RWR H+ R R
Sbjct: 3 IDYSKWDKLELSDDSDIEVHPNVDKKSFIRWRQRDIHEKRAVR 45
