miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28932_hsa-mir-616:mirbase
Length = 97
Score = 192 bits (97), Expect = 4e-50
Identities = 97/97 (100%)
Strand = Plus / Minus
Query: 6 ttttaaaacaggtcattcctctgctcaaaccctccaatgacttcctatttcatgtcatgg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ttttaaaacaggtcattcctctgctcaaaccctccaatgacttcctatttcatgtcatgg 38
Query: 66 aagtcactgaagggttttgagtggaggaattacctaa 102
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 aagtcactgaagggttttgagtggaggaattacctaa 1
>30546_ptr-mir-616:mirbase
Length = 96
Score = 174 bits (88), Expect = 9e-45
Identities = 94/96 (97%)
Strand = Plus / Minus
Query: 6 ttttaaaacaggtcattcctctgctcaaaccctccaatgacttcctatttcatgtcatgg 65
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 96 ttttaaaacaggtcattcctctgctcaaaccctccaatgacttcctgtttcatgtcatgg 37
Query: 66 aagtcactgaagggttttgagtggaggaattaccta 101
||||||||| ||||||||||||||||||||||||||
Sbjct: 36 aagtcactggagggttttgagtggaggaattaccta 1
>31195_ppy-mir-616:mirbase
Length = 98
Score = 170 bits (86), Expect = 1e-43
Identities = 96/98 (97%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 6 ttttaaaacaggtcattcctctgctcaaa-ccctccaatgacttcctatttcatgtcatg 64
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 98 ttttaaaacaggtcattcctctgctcaaaaccctccaatgacttcctatttcatgtcatg 39
Query: 65 gaagtcactgaagggttttgagtggaggaattacctaa 102
|||||||||| |||||||||||||||||||||||||||
Sbjct: 38 gaagtcactggagggttttgagtggaggaattacctaa 1
>28056_mml-mir-616:mirbase
Length = 98
Score = 123 bits (62), Expect = 3e-29
Identities = 90/98 (91%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 6 ttttaaaacaggtcattcctctgctcaaacc-ctccaatgacttcctatttcatgtcatg 64
||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||| |
Sbjct: 98 ttttaaaacaggtcattcctctgctcaaaactctccagtgacttcctatgtcatgtcagg 39
Query: 65 gaagtcactgaagggttttgagtggaggaattacctaa 102
||||||| || ||||||||||| |||||||||||||||
Sbjct: 38 gaagtcattggagggttttgagaggaggaattacctaa 1
