miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 73.8 bits (37), Expect = 4e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||||||||||||| | || ||||||||||| ||||| ||||| ||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccatggaaagtaatggcaagaactg-caatttcttttg 71
Query: 80 cacca 84
|||||
Sbjct: 72 cacca 76
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 73.8 bits (37), Expect = 4e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||||||||||| |||||||| | | || |||||||||||||||| ||||||||||||
Sbjct: 13 gcaaaagtaattgtggtttttgtcattgattgtaatggcaaaaactg-caattgcttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccaacctaata 84
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 67.9 bits (34), Expect = 2e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 21 caaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttgc 80
|||||| |||||||||||||||| | | ||| |||||||||||| | ||||| |||||||
Sbjct: 71 caaaagyaattgcggtttttgccattggcaggaatggcaaaaaccg-caattacttttgc 13
Query: 81 accaccctaata 92
|||| |||||||
Sbjct: 12 accaacctaata 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgcc 36
>RF01061;mir-548;ABGA01014573.1/16804-16721 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||||||||||| || ||||||| | || || |||||||||| || |||||||||||||
Sbjct: 13 gcaaaagtaattgtgggttttgccattgaaagaaatggcaaaa-ctcacaattgcttttg 71
Query: 80 caccaccctaata 92
|||||| ||||||
Sbjct: 72 caccacactaata 84
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||||||||||||||||||| | ||||||| ||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccattgacagtagtggcaaaaac 57
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||||||||||||| | | ||||||||||||||| | ||||| ||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccattaaaagtaatggcaaaaaccg-caattacttttg 71
Query: 80 cacca 84
|||||
Sbjct: 72 cacca 76
Score = 50.1 bits (25), Expect = 5e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 12 tggtgggngcaaaagtaattgcggtttttgcc 43
|||| || ||||||||||||||||||||||||
Sbjct: 80 tggttggtgcaaaagtaattgcggtttttgcc 49
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||||||||||||||||||| | || |||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccattgaaagtaatggcaaaaac 57
>RF01061;mir-548;CABD01319512.1/496-413 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 13 gcaaaagtaattgcggttattgccgttgaaagtaatggcaaaaac 57
>RF01061;mir-548;AANU01123316.1/10409-10492 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||| || ||||||| || | || ||||||||||||||||| ||||| ||||||
Sbjct: 13 gcaaaagtaactgtggtttttcccattgaaagtaatggcaaaaactg-caattacttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccagcctaata 84
>RF01061;mir-548;ABSL01074616.1/61238-61321 9606:Homo sapiens
(human)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||| ||||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||
Sbjct: 13 gcaaaaataattgcagtttttgccattgacagtaatggtaaaaactg-caattacttttg 71
Query: 80 cacc 83
||||
Sbjct: 72 cacc 75
>RF01061;mir-548;ABGA01380877.1/47446-47363 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||| | ||||||| | || || |||||||||||||| ||||| ||||||
Sbjct: 13 gcaaaagtaattgcagcttttgccattgaaagcaatggcaaaaactg-caattacttttg 71
Query: 80 cacca 84
|||||
Sbjct: 72 cacca 76
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||||||||||||| | | ||||||||||||| | ||||| ||||||
Sbjct: 72 gcaaaagtaattgcggtttttgccattgtttttaatggcaaaaaccg-caattacttttg 14
Query: 80 caccaccctaata 92
|||||| ||||||
Sbjct: 13 caccactctaata 1
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||||||||||||| | | | |||||||||||| | ||||| ||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccattaaaaacaatggcaaaaaccg-caattacttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccagcctaata 84
>RF01061;mir-548;AADC01015752.1/126987-127070 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
||||| |||||||||||||||||| | || |||||||||||||||
Sbjct: 13 gcaaatgtaattgcggtttttgccattgaaagtaatggcaaaaac 57
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||| ||| ||||| | |||||||||||| ||||| ||||| ||||||
Sbjct: 72 gcaaaagtaattgcagttcttgccattagcagtaatggcaagaactg-caattacttttg 14
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 13 caccaacctaata 1
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||||||||||| |||||| ||| || | |||||||| ||||||| ||||| ||||||
Sbjct: 13 gcaaaagtaattgtggttttggccttaaaaagtaatggtgaaaactg-caattacttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccaacctaata 84
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||||||||||| | | || |||||||||||| || | ||||| ||||||
Sbjct: 13 gcaaaagtaattgcggtttttgtcattgaaagtaatggcaaagaccg-caattacttttg 71
Query: 80 cacca 84
|||||
Sbjct: 72 cacca 76
>RF01061;mir-548;AADA01152819.1/20739-20822 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactg 66
||||||||| |||| ||||||||| | || |||||||||||||||||
Sbjct: 13 gcaaaagtagttgcagtttttgccattgaaagtaatggcaaaaactg 59
>RF01061;mir-548;CABD01616280.2/84-1 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||| | |||||| || |||| |||| |||||||||||| ||| ||||||
Sbjct: 13 gcaaaagtaattacagtttttaccatagaaagtawtggcaaaaactg-tgatttcttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccaacctaata 84
>RF01061;mir-548;AL008721.1/97595-97678 9606:Homo sapiens (human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||| | ||||||| | | ||||||||||||||||| ||| | ||||||
Sbjct: 13 gcaaaagtaattgcagcttttgccattaaaagtaatggcaaaaactg-caaattcttttg 71
Query: 80 caccacccta 89
||||| ||||
Sbjct: 72 caccaaccta 81
>RF01061;mir-548;AC117179.4/116901-116818 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||| ||||||||| |||||||| | || ||||||||||||||| |||||| | ||||
Sbjct: 72 gcaaacgtaattgcgatttttgccattgaaagtaatggcaaaaac-cacaattacgtttg 14
Query: 80 caccacccta 89
||||| ||||
Sbjct: 13 caccaaccta 4
>RF01061;mir-548;AADB02001154.1/69220-69137 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||||||||| |||| ||||||| | || ||||||||||||||| | ||| ||||||
Sbjct: 13 gcaaaagtaatggcgggttttgccattgaaagtaatggcaaaaacccgccattacttttg 72
Query: 80 caccacccta 89
||||| ||||
Sbjct: 73 caccaaccta 82
>RF01061;mir-548;AANU01106767.1/8226-8143 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 23 aaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttgcac 82
||||||||||| |||||| || | | ||||||||||||||| | ||||| |||||||||
Sbjct: 16 aaagtaattgcagtttttaccattaaaagtaatggcaaaaaccg-caattacttttgcac 74
Query: 83 caccctaata 92
|| |||||||
Sbjct: 75 cagcctaata 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 72 gcaaaagtaattgcggtttttgcc 49
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||| ||||||||||||||||||| | || | ||||| ||||||| | | ||| ||||||
Sbjct: 13 gcaagagtaattgcggtttttgccattgaaattaatgacaaaaaccg-ctattacttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccaacctaata 84
>RF01061;mir-548;AC163751.3/6942-6859 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||| ||||||||||||||| | || | |||||||||||||
Sbjct: 13 gcaaaagtgattgcggtttttgccattgaaaataatggcaaaaac 57
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||||||||||||||||||| | | |||||| ||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccattaaaagtaattgcaaaaac 57
>RF01061;mir-548;AADC01134614.1/198131-198048 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||| ||| ||||||||| | || |||||||||| ||| || ||||| ||||||
Sbjct: 13 gcaaaagtaaatgcagtttttgccattgaaagtaatggcagaaattg-caattacttttg 71
Query: 80 cacca 84
|||||
Sbjct: 72 cacca 76
>RF01061;mir-548;AADB02060964.1/614-531 9606:Homo sapiens (human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||| ||||||||| || |||| |||||||||||| ||||| |||||
Sbjct: 13 gcaaaagtaattgcagtttttgccactgaaagtagtggcaaaaactg-caattatttttg 71
Query: 80 cacca 84
|||||
Sbjct: 72 cacca 76
>RF01061;mir-548;AADC01054028.1/147-64 9606:Homo sapiens (human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 52 taatggcaaaaactgacaattgcttttgcaccaccctaata 92
|||||||||||||| || ||||||||||||||| |||||||
Sbjct: 45 taatggcaaaaact-acgattgcttttgcaccaacctaata 84
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||||||||||||| | | || |||| ||||||| | ||||| ||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccattcaaagcaatgacaaaaaccg-caattacttttg 71
Query: 80 caccaccctaata 92
|| || |||||||
Sbjct: 72 caacaacctaata 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttg 41
||||||||||||||||||||||
Sbjct: 72 gcaaaagtaattgcggtttttg 51
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||||||||||| | ||| |||| | | ||||||||||||||| |||||| ||||||
Sbjct: 72 gcaaaagtaattgagatttctgccattaaaagtaatggcaaaaacc-acaattacttttg 14
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 13 caccaacctaata 1
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||||||||||||| ||||| | || ||||| |||||||||
Sbjct: 13 gcaaaagtaattgcggttcttgccattgaaagtaacggcaaaaac 57
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||| ||| ||||||||| | | ||| |||||||||| | |||||| ||||||
Sbjct: 13 gcaaaagtaagtgctgtttttgccattaaaagtcatggcaaaaa-taacaattacttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccaacctaata 84
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||||||||||| ||||||| | | |||||||||||||||
Sbjct: 13 gcaaaagtaattgcggattttgccattaaaagtaatggcaaaaac 57
>RF01061;mir-548;CABD01524054.2/315-398 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||||||||||||||||||||| | || || |||||||||| | ||||| ||||||
Sbjct: 13 gcaaaagtaattgcggtttttgctattgaagctagtggcaaaaaccg-caatttcttttg 71
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 72 caccaacctaata 84
>RF01061;mir-548;CABD01203916.1/289-206 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 23 aaagtaattgcggtttttgccgtagacagtaatggcaaaaa 63
||||||||||| ||||||||| | || ||||||||||||||
Sbjct: 16 aaagtaattgcagtttttgccattgaaagtaatggcaaaaa 56
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
|||||||||||||||||||||||| | | | |||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgccattggaaataatggcaaaaac 57
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 21 caaaagtaattgcggtttttgcc 43
|||||||||||||||||||||||
Sbjct: 71 caaaagtaattgcggtttttgcc 49
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||||||||| ||||||||| | | ||||||| ||||| | | ||||| ||||||
Sbjct: 72 gcaaaagtaattgcagtttttgccattaaaagtaatgtcaaaacccg-caattacttttg 14
Query: 80 caccaccctaata 92
||||| |||||||
Sbjct: 13 caccaacctaata 1
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 72 gcaaaagtaattgcggtttttgcc 49
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgcc 36
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 76 gcaaaagtaattgcggtttttgcc 53
>RF01061;mir-548;ABSL01073318.1/15548-15465 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgcc 36
>RF01061;mir-548;AADC01094388.1/15092-15175 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaa 63
|||||||| |||| |||||||||| | || ||||||||||||||
Sbjct: 13 gcaaaagtcattgtggtttttgccattgaaagtaatggcaaaaa 56
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgcc 36
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 72 gcaaaagtaattgcggtttttgcc 49
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 22 aaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttgca 81
||||||||||| || ||||| | | || ||||||||||||||| | ||||| ||||||||
Sbjct: 15 aaaagtaattgtggcttttgtcattgaaagtaatggcaaaaaccg-caattacttttgca 73
Query: 82 ccacccta 89
||| ||||
Sbjct: 74 ccaaccta 81
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 72 gcaaaagtaattgcggtttttgcc 49
>RF01061;mir-548;ABBA01063869.1/23093-23176 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 21 caaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttgc 80
|||||| |||||| |||||||| | | |||||| ||||||||| |||||||||||||
Sbjct: 14 caaaagcaattgcagtttttgctattaaaagtaataccaaaaactg-caattgcttttgc 72
Query: 81 accaccctaata 92
|||| |||||||
Sbjct: 73 accagcctaata 84
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgcc 36
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 21 caaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttgc 80
|||||||||||| |||||||||| | | ||| ||||||||||| | || || |||||||
Sbjct: 14 caaaagtaattgtggtttttgccattgcaagtgatggcaaaaaccg-cacttacttttgc 72
Query: 81 accaccctaata 92
|||| |||||||
Sbjct: 73 accaacctaata 84
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 21 caaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttgc 80
||||||||| ||||||||| ||| | | ||||||||| ||||| |||||| |||||||
Sbjct: 71 caaaagtaactgcggttttcgccattaaaagtaatggcgaaaacc-acaattacttttgc 13
Query: 81 accaccctaata 92
|||| |||||||
Sbjct: 12 accaacctaata 1
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgcc 43
||||||||||||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgcc 36
>RF01061;mir-548;AL160056.16/43591-43674 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaa 62
|||| ||||||||||||||||||| | | |||||||||||||
Sbjct: 13 gcaagagtaattgcggtttttgccattaaaagtaatggcaaaa 55
>RF01061;mir-548;AL023583.25/57094-57177 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||||||| |||||| ||||||| | | ||||||||||||||| | ||| | ||||||
Sbjct: 13 gcaaaagtagttgcggcttttgccattgcaagtaatggcaaaaaccg-caactacttttg 71
Query: 80 caccaccctaa 90
||||| |||||
Sbjct: 72 caccaacctaa 82
>RF01061;mir-548;AADB02010451.1/2216117-2216202 9606:Homo sapiens
(human)
Length = 86
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 50 agtaatggcaaaaactgacaattgcttttgcaccaccctaata 92
|||||||||||||| ||||||||||||||||| |||||||
Sbjct: 44 agtaatggcaaaaaaatgcaattgcttttgcaccaacctaata 86
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgc 42
|||||||||||||||||||||||
Sbjct: 13 gcaaaagtaattgcggtttttgc 35
>RF01061;mir-548;CABD01117548.1/2434-2351 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgc 42
|||||||||||||||||||||||
Sbjct: 72 gcaaaagtaattgcggtttttgc 50
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 13 ggtgggngcaaaagtaattgcggtttttgccgtagacagtaatggcaaaa 62
|||||| ||||||||||||| |||||||| | | | |||||||||||||
Sbjct: 6 ggtgggtgcaaaagtaattgtggtttttgacattaaaagtaatggcaaaa 55
>RF01061;mir-548;AANU01270843.1/85523-85605 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttgc 42
|||||||||||||||||||||||
Sbjct: 71 gcaaaagtaattgcggtttttgc 49
>RF01061;mir-548;AANU01260277.1/170-72 9544:Macaca mulatta (rhesus
monkey)
Length = 99
Score = 46.1 bits (23), Expect = 8e-05
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 50 agtaatggcaaaaactgacaattgcttttgcaccaccctaata 92
||||||||||||||| | ||||||| ||||||||| |||||||
Sbjct: 58 agtaatggcaaaaaccg-caattgcctttgcaccaacctaata 99
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 21 caaaagtaattgcggtttttgcc 43
|||||||||||||||||||||||
Sbjct: 71 caaaagtaattgcggtttttgcc 49
>RF01061;mir-548;AANU01283759.1/9595-9678 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 50 agtaatggcaaaaactgacaattgcttttgcaccaccctaata 92
||||||||||||||||| ||||| |||||| |||| |||||||
Sbjct: 43 agtaatggcaaaaactg-caattacttttgtaccagcctaata 84
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
|||||||| ||||| |||||||| | | ||||||| ||||||||| ||||| ||||||
Sbjct: 13 gcaaaagttattgcattttttgccattaaaagtaatgccaaaaactg-caattacttttg 71
Query: 80 caccacccta 89
||||| ||||
Sbjct: 72 caccaaccta 81
>RF01061;mir-548;AACZ02184973.1/13727-13644 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 11 ttggtgggngcaaaagtaattgcggtttttgcc 43
||||| || |||||||||| |||||||||||||
Sbjct: 81 ttggttggtgcaaaagtaactgcggtttttgcc 49
>RF01061;mir-548;AACZ02022871.1/5823-5909 9598:Pan troglodytes
(chimpanzee)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 55 tggcaaaaactgacaattgcttttgcaccaccctaata 92
|||||||||| | ||||||||||||||||| |||||||
Sbjct: 37 tggcaaaaaccg-caattgcttttgcaccaacctaata 1
>RF01061;mir-548;AADC01023522.1/7145-7062 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 20 gcaaaagtaattgcggtttttgccgtagacagtaatggcaaaaactgacaattgcttttg 79
||||| |||||||| |||||||| | || |||||||||||| |||| ||||| | ||||
Sbjct: 13 gcaaaggtaattgcactttttgccattgaaagtaatggcaaatactg-caattacctttg 71
Query: 80 caccacccta 89
||||| ||||
Sbjct: 72 caccaaccta 81
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 23 aaagtaattgcggtttttgccgtagacagtaatggcaaaaac 64
||||||||||||||||| ||| | || ||||||| |||||||
Sbjct: 16 aaagtaattgcggttttggccattgaaagtaatgtcaaaaac 57
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 gcaaaagtaattgcggtttttg 41
||||||||||||||||||||||
Sbjct: 72 gcaaaagtaattgcggtttttg 51
