miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32066_mmu-mir-423:mirbase
Length = 109
Score = 208 bits (105), Expect = 8e-55
Identities = 108/109 (99%)
Strand = Plus / Minus
Query: 18 caagcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaa 77
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 caagcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaa 50
Query: 78 agtctcgctctctgcccctcagcctaacttcctttatttcctcacaagt 126
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 agtctcgctctctgcccctcagcctaacttcctttatttcctcacaagt 1
>32067_mmu-mir-423:mirbase
Length = 109
Score = 208 bits (105), Expect = 8e-55
Identities = 108/109 (99%)
Strand = Plus / Minus
Query: 18 caagcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaa 77
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 caagcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaa 50
Query: 78 agtctcgctctctgcccctcagcctaacttcctttatttcctcacaagt 126
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 agtctcgctctctgcccctcagcctaacttcctttatttcctcacaagt 1
>28645_hsa-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 3e-48
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 35
Query: 81 ctcgctctctgcccctcagcctaacttcctttat 114
||||||||||||||||||||||||||||||||||
Sbjct: 34 ctcgctctctgcccctcagcctaacttcctttat 1
>28646_hsa-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 3e-48
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 35
Query: 81 ctcgctctctgcccctcagcctaacttcctttat 114
||||||||||||||||||||||||||||||||||
Sbjct: 34 ctcgctctctgcccctcagcctaacttcctttat 1
>27898_mml-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 7e-46
Identities = 93/94 (98%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 35
Query: 81 ctcgctctctgcccctcagcctaacttcctttat 114
||||||||||||||||||||||||||||||||||
Sbjct: 34 ctcgctctctgcccctcagcctaacttcctttat 1
>27899_mml-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 7e-46
Identities = 93/94 (98%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 35
Query: 81 ctcgctctctgcccctcagcctaacttcctttat 114
||||||||||||||||||||||||||||||||||
Sbjct: 34 ctcgctctctgcccctcagcctaacttcctttat 1
>33367_bta-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 7e-46
Identities = 93/94 (98%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 35
Query: 81 ctcgctctctgcccctcagcctaacttcctttat 114
||||||||||||||||||||||||||||||||||
Sbjct: 34 ctcgctctctgcccctcagcctaacttcctttat 1
>33368_bta-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 7e-46
Identities = 93/94 (98%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 35
Query: 81 ctcgctctctgcccctcagcctaacttcctttat 114
||||||||||||||||||||||||||||||||||
Sbjct: 34 ctcgctctctgcccctcagcctaacttcctttat 1
>30370_ptr-mir-423:mirbase
Length = 93
Score = 176 bits (89), Expect = 3e-45
Identities = 92/93 (98%)
Strand = Plus / Minus
Query: 22 cgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtc 81
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 cgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtc 34
Query: 82 tcgctctctgcccctcagcctaacttcctttat 114
|||||||||||||||||||||||||||||||||
Sbjct: 33 tcgctctctgcccctcagcctaacttcctttat 1
>30999_ppy-mir-423:mirbase
Length = 90
Score = 170 bits (86), Expect = 2e-43
Identities = 89/90 (98%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 31
Query: 81 ctcgctctctgcccctcagcctaacttcct 110
||||||||||||||||||||||||||||||
Sbjct: 30 ctcgctctctgcccctcagcctaacttcct 1
>31000_ppy-mir-423:mirbase
Length = 90
Score = 170 bits (86), Expect = 2e-43
Identities = 89/90 (98%)
Strand = Plus / Minus
Query: 21 gcgcgggttaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 80
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gcgcggggtaggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagt 31
Query: 81 ctcgctctctgcccctcagcctaacttcct 110
||||||||||||||||||||||||||||||
Sbjct: 30 ctcgctctctgcccctcagcctaacttcct 1
>32908_rno-mir-423:mirbase
Length = 79
Score = 157 bits (79), Expect = 3e-39
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 30 aggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctc 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctc 20
Query: 90 tgcccctcagcctaacttc 108
|||||||||||||||||||
Sbjct: 19 tgcccctcagcctaacttc 1
>34089_ssc-mir-423:mirbase
Length = 80
Score = 157 bits (79), Expect = 3e-39
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 29 taggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctct 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 taggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctct 20
Query: 89 ctgcccctcagcctaactt 107
|||||||||||||||||||
Sbjct: 19 ctgcccctcagcctaactt 1
>34090_ssc-mir-423:mirbase
Length = 80
Score = 157 bits (79), Expect = 3e-39
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 29 taggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctct 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 taggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctct 20
Query: 89 ctgcccctcagcctaactt 107
|||||||||||||||||||
Sbjct: 19 ctgcccctcagcctaactt 1
>29349_hsa-mir-3184:mirbase
Length = 75
Score = 149 bits (75), Expect = 6e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 33 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
Query: 93 ccctcagcctaactt 107
|||||||||||||||
Sbjct: 61 ccctcagcctaactt 75
>27173_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 9e-30
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 40 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 4
Query: 100 cct 102
|||
Sbjct: 3 cct 1
>27174_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 9e-30
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 40 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 4
Query: 100 cct 102
|||
Sbjct: 3 cct 1
>26840_cfa-mir-423a:mirbase
Length = 59
Score = 117 bits (59), Expect = 2e-27
Identities = 59/59 (100%)
Strand = Plus / Minus
Query: 40 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctca 98
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctca 1
