miRNEST 2.0, an integrative microRNA resource :: BLAST
>48501_ghr-miR393:pmrd
Length = 119
Score = 236 bits (119), Expect = 4e-63
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatctaatgttgatgatgggcttccttgaaaaccttaacgaat 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatctaatgttgatgatgggcttccttgaaaaccttaacgaat 60
Query: 82 taattattgatttttgttgattcagttcagtacccattggatcatgcgatcccttcgga 140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taattattgatttttgttgattcagttcagtacccattggatcatgcgatcccttcgga 119
>51723_ptc-miR393d:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 116 cattggatcatgcgatcccttcggaattttcca 148
||||||||||||||||||||| |||||||||||
Sbjct: 75 cattggatcatgcgatcccttaggaattttcca 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatctaatg 47
||||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatctaatg 36
>51722_ptc-miR393c:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 118 ttggatcatgcgatcccttcggaattttcca 148
||||||||||||||||||| |||||||||||
Sbjct: 77 ttggatcatgcgatcccttaggaattttcca 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatctaatg 47
||||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatctaatg 36
>55056_zma-miR393:pmrd
Length = 126
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 ggtggagagctccaaagggatcgcattgatcta 44
||||||| ||||||||||||||||||||||||
Sbjct: 11 ggtggaggactccaaagggatcgcattgatcta 43
>55061_zma-miR393e:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 ctccaaagggatcgcattgatcta 44
||||||||||||||||||||||||
Sbjct: 88 ctccaaagggatcgcattgatcta 65
>55060_zma-miR393d:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 ctccaaagggatcgcattgatcta 44
||||||||||||||||||||||||
Sbjct: 90 ctccaaagggatcgcattgatcta 67
>55059_zma-miR393c:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 ctccaaagggatcgcattgatcta 44
||||||||||||||||||||||||
Sbjct: 2 ctccaaagggatcgcattgatcta 25
>55058_zma-miR393b:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 ctccaaagggatcgcattgatcta 44
||||||||||||||||||||||||
Sbjct: 2 ctccaaagggatcgcattgatcta 25
>55063_zma-miR393g:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatcta 44
|||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcta 23
>54849_vvi-miR393a:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 ggtggagagctccaaagggatcgcattgatc 42
|||||| || |||||||||||||||||||||
Sbjct: 1 ggtggacagttccaaagggatcgcattgatc 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 114 cccattggatcatgcgatcccttcggaattttccatc 150
||||||||||||||| ||||||| |||| | ||||||
Sbjct: 88 cccattggatcatgctatcccttaggaactctccatc 124
>48919_osa-miR393b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctccaaagggatcgcattgatct 43
|||||||||||||||||||||||
Sbjct: 26 ctccaaagggatcgcattgatct 48
>48918_osa-miR393b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctccaaagggatcgcattgatct 43
|||||||||||||||||||||||
Sbjct: 26 ctccaaagggatcgcattgatct 48
>55062_zma-miR393f:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>55057_zma-miR393a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>54850_vvi-miR393b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>54470_sbi-miR393:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>53841_ptc-miRf12019-akr:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatc 37
>53840_ptc-miRf12018-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52949_ptc-miRf11127-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52948_ptc-miRf11126-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52374_ptc-miRf10552-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>51972_ptc-miRf10150-akr:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 82 tccaaagggatcgcattgatc 62
>51950_ptc-miRf10128-akr:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatc 37
>51721_ptc-miR393b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>51720_ptc-miR393a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48917_osa-miR393:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48731_mtr-miR393b:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
>48730_mtr-miR393:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>48576_gma-miR393:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48373_bna-miR393:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>47287_ath-miRf10187-akr:pmrd
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 12 tccaaagggatcgcattgatc 32
>47214_ath-miRf10114-akr:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 10 tccaaagggatcgcattgatc 30
>46999_ath-miR393b:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>46998_ath-miR393a:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tccaaagggatcgcattgatc 42
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
