miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00413;SNORA19;AAQR01127914.1/541-674 30611:Otolemur garnettii
(small-eared galago)
Length = 134
Score = 117 bits (59), Expect = 2e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctatacagatagttgaaggttaattagcagtataactataaatagtaatgctgccagtct 121
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 122 ccttcagacaa 132
>RF00413;SNORA19;AAQR01605767.1/3570-3463 30611:Otolemur garnettii
(small-eared galago)
Length = 108
Score = 117 bits (59), Expect = 2e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 ctatacagatagttgaaggttaattagcagtataactataaatagtaatgctgccagtct 95
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 96 ccttcagacaa 106
>RF00413;SNORA19;AAQR01494076.1/1687-1804 30611:Otolemur garnettii
(small-eared galago)
Length = 118
Score = 109 bits (55), Expect = 5e-24
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 ctatacgaatagttgaagattaattagcagtataactataaatagtaatgctgccagtct 105
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 106 ccttcagacaa 116
>RF00413;SNORA19;AAQR01696570.1/312-446 30611:Otolemur garnettii
(small-eared galago)
Length = 135
Score = 109 bits (55), Expect = 5e-24
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||| ||| ||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 63 ctatacagatagttgaaggttaattagcagtataactataaatagtaatgccgccagtct 122
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 123 ccttcagacaa 133
>RF00413;SNORA19;AAQR01718897.1/1278-1177 30611:Otolemur garnettii
(small-eared galago)
Length = 102
Score = 107 bits (54), Expect = 2e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 2 tatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctc 61
|||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 31 tatacaaatagttgaaggttaattcacagtataactataaatagtaatgctgccagtctc 90
Query: 62 cttcagacaa 71
||||||||||
Sbjct: 91 cttcagacaa 100
>RF00413;SNORA19;AAQR01401466.1/797-909 30611:Otolemur garnettii
(small-eared galago)
Length = 113
Score = 105 bits (53), Expect = 8e-23
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| ||||||| ||||| ||| | ||||||||||||||||||||||||||||
Sbjct: 41 ctatacaaatagttgaaggttaattggcaatgtaactataaatagtaatgctgccagtct 100
Query: 61 ccttcagacaaaa 73
|||||||||||||
Sbjct: 101 ccttcagacaaaa 113
>RF00413;SNORA19;AAQR01641873.1/5617-5485 30611:Otolemur garnettii
(small-eared galago)
Length = 133
Score = 103 bits (52), Expect = 3e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataa-atagtaatgctgccagtc 59
||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 60 ctatacagatagttgaaggttaattagcagtataactataagatagtaatgctgccagtc 119
Query: 60 tccttcagacaa 71
||||||||||||
Sbjct: 120 tccttcagacaa 131
>RF00413;SNORA19;AAQR01068327.1/1244-1341 30611:Otolemur garnettii
(small-eared galago)
Length = 98
Score = 101 bits (51), Expect = 1e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 atacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctcc 62
||||||||| ||||||| |||||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 28 atacaaatagttgaaggttaattaacagtgtaactataaatagtaatgccgccagtctcc 87
Query: 63 ttcagacaaaa 73
|||||||||||
Sbjct: 88 ttcagacaaaa 98
>RF00413;SNORA19;AAQR01061282.1/397-292 30611:Otolemur garnettii
(small-eared galago)
Length = 106
Score = 101 bits (51), Expect = 1e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||||| |||| |||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 34 ctatacgaatatgtgaaggttaattagcagtataactataaataataatgctgccagtct 93
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 94 ccttcagacaa 104
>RF00413;SNORA19;AAGU02143065.1/12125-11996 9785:Loxodonta africana
(African savanna elephant)
Length = 130
Score = 97.6 bits (49), Expect = 2e-20
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||
Sbjct: 60 ctatacaaatagttgaaggttaattagcagtataac--taagtagtaatgctgccagtct 117
Query: 61 ccttcagacaaa 72
||||||||||||
Sbjct: 118 ccttcagacaaa 129
>RF00413;SNORA19;AAQR01690547.1/713-579 30611:Otolemur garnettii
(small-eared galago)
Length = 135
Score = 93.7 bits (47), Expect = 3e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||| ||| ||||||| ||||| ||| | ||||||||||||||||||||||||||||
Sbjct: 63 ctatacagatagttgaaggttaattggcaatgtaactataaatagtaatgctgccagtct 122
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 123 ccttcagacaa 133
>RF00413;SNORA19;AAGW01493639.1/4530-4661 9986:Oryctolagus cuniculus
(rabbit)
Length = 132
Score = 93.7 bits (47), Expect = 3e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 5 acaaataattgaaggctaattagcagtataactataaa-tagtaatgctgccagtctcct 63
||||||| ||||||| ||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 63 acaaatagttgaaggttaattagcagtataactatcaagtagtaatgctgccagtctcct 122
Query: 64 tcagaca 70
|||||||
Sbjct: 123 tcagaca 129
>RF00413;SNORA19;AAQR01732395.1/11970-12095 30611:Otolemur garnettii
(small-eared galago)
Length = 126
Score = 91.7 bits (46), Expect = 1e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 4 tacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctcct 63
|||||||| ||||| | || ||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 57 tacaaatacttgaaagttacttagcagtataaccataaataataatgctgccagtctcct 116
Query: 64 tcagacaaaa 73
||||||||||
Sbjct: 117 tcagacaaaa 126
>RF00413;SNORA19;AAFC03073640.1/32760-32889 9913:Bos taurus (cattle)
Length = 130
Score = 89.7 bits (45), Expect = 5e-18
Identities = 66/72 (91%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct: 60 ctatacaaatagttgaaggttaattagcagtataac--taaatagtaatgctgacagtct 117
Query: 61 ccttcagacaaa 72
|||||| |||||
Sbjct: 118 ccttcacacaaa 129
>RF00413;SNORA19;AAFC03003546.1/41365-41237 9913:Bos taurus (cattle)
Length = 129
Score = 89.7 bits (45), Expect = 5e-18
Identities = 66/72 (91%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||||||||||| ||||||| |||| ||||| ||||| ||||||||||||||
Sbjct: 59 ctatacaaataattgaaggttaattagtagtaaaacta--aatagaaatgctgccagtct 116
Query: 61 ccttcagacaaa 72
||||||||||||
Sbjct: 117 ccttcagacaaa 128
>RF00413;SNORA19;ABRP01056337.1/2001-1871 132908:Pteropus vampyrus
(large flying fox)
Length = 131
Score = 87.7 bits (44), Expect = 2e-17
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 15 gaaggctaattagcagtataactataaatagtaatgctgccagtctccttcagaca 70
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 74 gaaggttaattagcagtataact-taaatagtaatgctgccagtctccttcagaca 128
>RF00413;SNORA19;AAFC03047488.1/67055-66950 9913:Bos taurus (cattle)
Length = 106
Score = 87.7 bits (44), Expect = 2e-17
Identities = 66/71 (92%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 2 tatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctc 61
|||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||
Sbjct: 38 tatacaaataattgaaggttaattagcagtataac--taaatagtaat-atgccagtctc 94
Query: 62 cttcagacaaa 72
|||||||||||
Sbjct: 95 cttcagacaaa 105
>RF00413;SNORA19;AAQR01484564.1/8027-8102 30611:Otolemur garnettii
(small-eared galago)
Length = 76
Score = 87.7 bits (44), Expect = 2e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| ||||||| |||||| |||| ||||||||||||||||||| |||||||
Sbjct: 4 ctatacaaatagttgaaggttaattatcagtgtaactataaatagtaatgcgaccagtct 63
Query: 61 ccttcaga 68
||||||||
Sbjct: 64 ccttcaga 71
>RF00413;SNORA19;ABRT010323845.1/971-838 9478:Tarsius syrichta
(Philippine tarsier)
Length = 134
Score = 87.7 bits (44), Expect = 2e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 2 tatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctc 61
|||| ||||| ||||||| ||||||||||||| ||| | |||||||||||||| ||||||
Sbjct: 63 tatataaatagttgaaggttaattagcagtatgactgtgaatagtaatgctgcaagtctc 122
Query: 62 cttcagacaaaa 73
||||||||||||
Sbjct: 123 cttcagacaaaa 134
>RF00413;SNORA19;AALT01468171.1/15879-16007 42254:Sorex araneus
(European shrew)
Length = 129
Score = 85.7 bits (43), Expect = 7e-17
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 9 ataattgaaggctaattagcagtataactataaatagtaatgctgccagtctccttcaga 68
||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||
Sbjct: 67 ataattgaaggctaattagcagtatgacta--aatagtaatactgccagtctccttcaga 124
Query: 69 ca 70
||
Sbjct: 125 ca 126
>RF00413;SNORA19;AAQR01648403.1/223-298 30611:Otolemur garnettii
(small-eared galago)
Length = 76
Score = 85.7 bits (43), Expect = 7e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| ||||||| ||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 4 ctatacaaatagttgaaggttaattagcagtatgactataaataataatgttgccagtct 63
Query: 61 ccttcagacaa 71
| || ||||||
Sbjct: 64 cttttagacaa 74
>RF00413;SNORA19;AANG01507127.1/275-146 9685:Felis catus (domestic
cat)
Length = 130
Score = 81.8 bits (41), Expect = 1e-15
Identities = 56/60 (93%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 13 ttgaaggctaattagcagtataactataaatagtaatgctgccagtctccttcagacaaa 72
||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 72 ttgaaggttaattagcagtataacta--aatagtaatgctggcagtctccttcagacaaa 129
>RF00413;SNORA19;AAQR01059214.1/1883-2011 30611:Otolemur garnettii
(small-eared galago)
Length = 129
Score = 81.8 bits (41), Expect = 1e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| |||||| | ||||||||| |||| ||||||||| |||||| ||||||
Sbjct: 57 ctatacaaatagctgaaggttgattagcagtctaaccataaatagtcatgctgacagtct 116
Query: 61 ccttcagacaaaa 73
|||||||||||||
Sbjct: 117 ccttcagacaaaa 129
>RF00413;SNORA19;AAQR01514637.1/2067-2195 30611:Otolemur garnettii
(small-eared galago)
Length = 129
Score = 81.8 bits (41), Expect = 1e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 5 acaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctcctt 64
||||||| |||||| ||||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 61 acaaataggtgaaggttaattagcagtataactatcaacagtaatgctgcccgtctcctt 120
Query: 65 cagac 69
|||||
Sbjct: 121 cagac 125
>RF00413;SNORA19;ABRO01306455.1/245-116 10020:Dipodomys ordii (Ord's
kangaroo rat)
Length = 130
Score = 79.8 bits (40), Expect = 5e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| |||| || |||||||||| | |||||| |||||||| ||||||||||
Sbjct: 58 ctatacaaatagttgatggttaattagcagattcactatacatagtaattctgccagtct 117
Query: 61 ccttcagacaaa 72
||||||||||||
Sbjct: 118 ccttcagacaaa 129
>RF00413;SNORA19;AAYZ01126303.1/3385-3311 9978:Ochotona princeps
(American pika)
Length = 75
Score = 79.8 bits (40), Expect = 5e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 13 ttgaaggctaattagcagtataactataaatagtaatgctgccagtctccttcaga 68
||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct: 15 ttgaaggttaattagcagtataactatgagtagtaatgctgtcagtctccttcaga 70
>RF00413;SNORA19;AAQR01425420.1/3117-2970 30611:Otolemur garnettii
(small-eared galago)
Length = 148
Score = 77.8 bits (39), Expect = 2e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||| |||||| |||||| ||||||||||||||||||||| || ||||||| | |||||
Sbjct: 76 ctatgcaaatagttgaagattaattagcagtataactataagtaataatgctactagtct 135
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 136 ccttcagacaa 146
>RF00413;SNORA19;AAQR01659845.1/5690-5814 30611:Otolemur garnettii
(small-eared galago)
Length = 125
Score = 77.8 bits (39), Expect = 2e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 2 tatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctc 61
||||| |||| | ||||| ||||||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 54 tataccaatagtggaaggttaattagcagtataagtatacatagtaaggctgccagtttc 113
Query: 62 cttcagacaaa 72
|||||||||||
Sbjct: 114 cttcagacaaa 124
>RF00413;SNORA19;ABRR01329809.1/3649-3520 30538:Lama pacos (alpaca)
Length = 130
Score = 75.8 bits (38), Expect = 7e-14
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 7 aaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctccttca 66
||||| ||| ||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 66 aaatagttggaggttaattagcagtataacta--aatagtaatgctgccagtctccttcg 123
Query: 67 gacaa 71
|||||
Sbjct: 124 gacaa 128
>RF00413;SNORA19;AALT01385064.1/2377-2482 42254:Sorex araneus
(European shrew)
Length = 106
Score = 73.8 bits (37), Expect = 3e-13
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 11 aattgaaggctaattagcagtataactataaatagtaatgctgccagtctccttcagaca 70
||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||
Sbjct: 46 aattgaaggctaattagcagtatgac--taaatggtaatactgccagtctccttcagaca 103
>RF00413;SNORA19;AAPE01276588.1/731-831 59463:Myotis lucifugus
(little brown bat)
Length = 101
Score = 73.8 bits (37), Expect = 3e-13
Identities = 49/52 (94%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 21 taattagcagtataactataaatagtaatgctgccagtctccttcagacaaa 72
|||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 51 taattagcagtataacta--aatagtaaggctgccagtctccttcagacaaa 100
>RF00413;SNORA19;AAQR01138736.1/219-126 30611:Otolemur garnettii
(small-eared galago)
Length = 94
Score = 73.8 bits (37), Expect = 3e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||| | |
Sbjct: 22 ctatccaaatagttgaaggttaattcacagtataactataaatagtaatgctgccatttt 81
Query: 61 ccttcagacaaaa 73
| ||||||||||
Sbjct: 82 ctctcagacaaaa 94
>RF00413;SNORA19;AALT01185779.1/301-171 42254:Sorex araneus
(European shrew)
Length = 131
Score = 71.9 bits (36), Expect = 1e-12
Identities = 53/58 (91%), Gaps = 3/58 (5%)
Strand = Plus / Plus
Query: 13 ttgaaggctaattagcagtataactataaatagtaatgctgccagtctccttcagaca 70
|||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 74 ttgaagactaattagcagtataacta---atagtaatgccgccagtctccttcagaca 128
>RF00413;SNORA19;AAQR01692040.1/88-203 30611:Otolemur garnettii
(small-eared galago)
Length = 116
Score = 71.9 bits (36), Expect = 1e-12
Identities = 62/71 (87%), Gaps = 6/71 (8%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 50 ctatacaaatagttgaaggttaattagcagtataatta------gtaatgctgccagtct 103
Query: 61 ccttcagacaa 71
|||||||||||
Sbjct: 104 ccttcagacaa 114
>RF00413;SNORA19;AAFR03024732.1/49382-49512 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 131
Score = 67.9 bits (34), Expect = 2e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||||||| | || ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 59 ctatacaatttatagaaggttaattagcagtataacttggtatagtaatgctgccagtct 118
Query: 61 ccttca 66
||||||
Sbjct: 119 ccttca 124
>RF00413;SNORA19;AAGV020558147.1/1261-1136 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 126
Score = 67.9 bits (34), Expect = 2e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||| |||||| ||||||| ||||||||||||| |||| |||||||||||||||||||
Sbjct: 56 ctattcaaatagttgaagggtaattagcagtatcacta--aatagtaatgctgccagtcg 113
Query: 61 ccttcagacaaaa 73
||||| ||||||
Sbjct: 114 tcttcaaacaaaa 126
>RF00413;SNORA19;AAGU02644623.1/1894-1767 9785:Loxodonta africana
(African savanna elephant)
Length = 128
Score = 67.9 bits (34), Expect = 2e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 3 atacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctcc 62
||||||||| ||||||| ||||||||||| |||||| || ||| ||||||||||||||||
Sbjct: 59 atacaaatagttgaaggttaattagcagtgtaacta-aagtaggaatgctgccagtctcc 117
Query: 63 tt 64
||
Sbjct: 118 tt 119
>RF00413;SNORA19;AAPE01494763.1/1762-1871 59463:Myotis lucifugus
(little brown bat)
Length = 110
Score = 65.9 bits (33), Expect = 7e-11
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||| |||||| ||||||| ||||||||| |||||||| |||| |||||||||||||||
Sbjct: 40 ctatgcaaatagttgaaggttaattagcaatataacta--aatattaatgctgccagtct 97
Query: 61 ccttcagacaaa 72
| || |||||||
Sbjct: 98 cttttagacaaa 109
>RF00413;SNORA19;AABR04095467.1/1111-1225 10116:Rattus norvegicus
(Norway rat)
Length = 115
Score = 65.9 bits (33), Expect = 7e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| ||||||| | ||||||| |||||| | |||||||| |||||||||
Sbjct: 43 ctatacaaatagttgaaggttcattagcaaagtaactacatatagtaattctgccagtcc 102
Query: 61 ccttcagacaaaa 73
|||||||||||||
Sbjct: 103 ccttcagacaaaa 115
>RF00413;SNORA19;ABDC01496715.1/1084-953 30608:Microcebus murinus
(gray mouse lemur)
Length = 132
Score = 63.9 bits (32), Expect = 3e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 2 tatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctc 61
|||||||||| || |||| | ||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 61 tatacaaatagttcaaggtaagttagcagtatagctataaagagtaatgttgccagtctc 120
Query: 62 cttc 65
||||
Sbjct: 121 cttc 124
>RF00413;SNORA19;AAIY01362900.1/842-713 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 130
Score = 63.9 bits (32), Expect = 3e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 14 tgaaggctaattagcagtataactataaatagtaatgctgccagtctccttcagacaaaa 73
|||||| ||||||||||| ||||| | |||||||||||||||||||||||| ||||||
Sbjct: 71 tgaaggttaattagcagtttaactgaacgtagtaatgctgccagtctccttcacacaaaa 130
>RF00413;SNORA19;AANN01294990.1/973-1082 9365:Erinaceus europaeus
(western European hedgehog)
Length = 110
Score = 61.9 bits (31), Expect = 1e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||||||||| | |||| |||||||||||||||| |||| ||| |||||||||||||
Sbjct: 40 ctatacaaatagctcaaggttaattagcagtataac--taaacagtcatgctgccagtct 97
Query: 61 ccttca 66
||||||
Sbjct: 98 ccttca 103
>RF00413;SNORA19;AAGW01487814.1/2080-1952 9986:Oryctolagus cuniculus
(rabbit)
Length = 129
Score = 60.0 bits (30), Expect = 4e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 13 ttgaaggctaattagcagtataactataaatagtaatgctgccagtctccttca 66
||||||| |||||||| || ||||| || ||||||||||||||||||||||||
Sbjct: 69 ttgaaggttaattagccgtgtaacttcaagtagtaatgctgccagtctccttca 122
>RF00413;SNORA19;AANN01479625.1/1092-964 9365:Erinaceus europaeus
(western European hedgehog)
Length = 129
Score = 56.0 bits (28), Expect = 7e-08
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 4 tacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctcct 63
|||||||| |||||| |||||||||||||||| || |||| ||||||||||||||||
Sbjct: 62 tacaaatagatgaaggttaattagcagtataac--tagatagacatgctgccagtctcct 119
Query: 64 tca 66
|||
Sbjct: 120 tca 122
>RF00413;SNORA19;AAYZ01427784.1/652-522 9978:Ochotona princeps
(American pika)
Length = 131
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 43 tagtaatgctgccagtctccttcagaca 70
||||||||||||||||||||||||||||
Sbjct: 101 tagtaatgctgccagtctccttcagaca 128
>RF00413;SNORA19;AAPN01114340.1/2052-2183 9258:Ornithorhynchus
anatinus (platypus)
Length = 132
Score = 54.0 bits (27), Expect = 3e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 ttgaaggctaattagcagtataactataaatagtaa-tgctgccagtctccttcagaca 70
||||||| |||||||||| | |||| || ||||||| ||||||||||| ||||||||||
Sbjct: 71 ttgaaggttaattagcagcacaactctatatagtaaatgctgccagtccccttcagaca 129
>RF00413;SNORA19;AANN01771774.1/1296-1167 9365:Erinaceus europaeus
(western European hedgehog)
Length = 130
Score = 54.0 bits (27), Expect = 3e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
||||| ||||| |||||| ||||||||||| |||||| |||||| |||||||||||
Sbjct: 60 ctatagaaatagctgaaggttaattagcagtgtaacta--aatagtcgcgctgccagtct 117
Query: 61 ccttcagaca 70
||||||||||
Sbjct: 118 ccttcagaca 127
>RF00413;SNORA19;AAGV020624210.1/725-598 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 128
Score = 52.0 bits (26), Expect = 1e-06
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataacta-taaatagtaatgctgccagtc 59
||||||||||| | ||||| ||||||||||||| | | |||||| ||||||||||||||
Sbjct: 56 ctatacaaatagt-gaaggttaattagcagtattataactaaataataatgctgccagtc 114
Query: 60 tccttcagacaaaa 73
| ||||| ||||||
Sbjct: 115 ttcttcaaacaaaa 128
>RF00413;SNORA19;AANN01541926.1/123-246 9365:Erinaceus europaeus
(western European hedgehog)
Length = 124
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 4 tacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctcct 63
|||||||| |||||| |||||| |||| |||||| |||||| ||||||||||||||||
Sbjct: 57 tacaaatagatgaaggttaattaacagtgtaacta--aatagtcatgctgccagtctcct 114
Query: 64 t 64
|
Sbjct: 115 t 115
>RF00413;SNORA19;AAIY01458362.1/618-750 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 133
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataacta 38
||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 59 ctatacaaataattgaaggttaactagaagtataacta 96
>RF00413;SNORA19;AACN010983830.1/15-146 9615:Canis lupus familiaris
(dog)
Length = 132
Score = 50.1 bits (25), Expect = 4e-06
Identities = 53/60 (88%), Gaps = 3/60 (5%)
Strand = Plus / Plus
Query: 13 ttgaaggctaattagcagtataactataaatagtaatgctgccagtctccttcagacaaa 72
||||||| |||||||||||||||| |||| | | || ||||||||||||||||||||||
Sbjct: 75 ttgaagggtaattagcagtataac--taaacaatcat-ctgccagtctccttcagacaaa 131
>RF00413;SNORA19;ABRT011084097.1/424-301 9478:Tarsius syrichta
(Philippine tarsier)
Length = 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 taattagcagtataactataaatagtaa 48
||||||||||||||||| ||||||||||
Sbjct: 80 taattagcagtataactgtaaatagtaa 107
>RF00413;SNORA19;AAGU02108642.1/608-463 9785:Loxodonta africana
(African savanna elephant)
Length = 146
Score = 46.1 bits (23), Expect = 6e-05
Identities = 47/54 (87%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 13 ttgaaggctaattagcagtataactataaatagtaatgctgccagtctccttca 66
||||||| || ||||| ||||||||| | ||| ||||||||||||||||||||
Sbjct: 88 ttgaaggttagttagctgtataacta--agtagcaatgctgccagtctccttca 139
>RF00413;SNORA19;AALT01167640.1/2007-2080 42254:Sorex araneus
(European shrew)
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 22 aattagcagtataactataaatagtaatgctgccagtctccttcagaca 70
||||||||||||||| |||||||||| |||||||| |||||| ||||
Sbjct: 25 aattagcagtataac--aaaatagtaattctgccagtttccttcggaca 71
>RF00413;SNORA19;AANN01342970.1/926-1066 9365:Erinaceus europaeus
(western European hedgehog)
Length = 141
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 atgctgccagtctccttcaga 68
|||||||||||||||||||||
Sbjct: 116 atgctgccagtctccttcaga 136
>RF00413;SNORA19;AANN01121768.1/1338-1222 9365:Erinaceus europaeus
(western European hedgehog)
Length = 117
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 37 tataaatagtaatgctgccagtctccttcagac 69
||||| |||| |||||||||||||| |||||||
Sbjct: 81 tataactagtcatgctgccagtctcattcagac 113
>RF00413;SNORA19;AACN010816289.1/683-812 9615:Canis lupus familiaris
(dog)
Length = 130
Score = 42.1 bits (21), Expect = 0.001
Identities = 51/60 (85%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 7 aaataattgaaggctaattagcagtataactataaatagtaatgctgccagtctccttca 66
||||| || |||| |||||||||||||||| |||||||||| ||||||| | ||||||
Sbjct: 66 aaatagttaaaggttaattagcagtataac--gaaatagtaatactgccagcccccttca 123
>RF00413;SNORA19;AABR04162405.1/787-894 10116:Rattus norvegicus
(Norway rat)
Length = 108
Score = 42.1 bits (21), Expect = 0.001
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 1 ctatacaaataattgaaggctaattagcagtataactataaatagtaatgctgccagtct 60
|||||| |||| ||||||| | |||||||| ||||| | |||| ||| ||||||||
Sbjct: 36 ctatactaatagttgaaggttcattagcagagtaactgcatatagcaattctgccagtac 95
Query: 61 ccttcagacaaaa 73
|||||||||||||
Sbjct: 96 ccttcagacaaaa 108
>RF00413;SNORA19;AAGU02543180.1/3057-2949 9785:Loxodonta africana
(African savanna elephant)
Length = 109
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 3 atacaaataattgaaggctaattagcagtataa 35
||||||||| ||||| | |||||||||||||||
Sbjct: 57 atacaaatacttgaaagttaattagcagtataa 89
