miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29094_hsa-mir-1249:mirbase
          Length = 66

 Score = 95.6 bits (48), Expect = 4e-21
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                          
Query: 9  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 56
          ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48





>30672_ptr-mir-1249:mirbase
          Length = 65

 Score = 95.6 bits (48), Expect = 4e-21
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                          
Query: 9  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 56
          ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48





>31309_ppy-mir-1249:mirbase
          Length = 66

 Score = 95.6 bits (48), Expect = 4e-21
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                          
Query: 9  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 56
          ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48





>33016_rno-mir-1249:mirbase
          Length = 120

 Score = 81.8 bits (41), Expect = 6e-17
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                               
Query: 4  gcatggggaggagggaggagatgggccaagttccctctggctggaacgccctt 56
          |||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 24 gcatggggaggagggaggggatgggccaagttccctatgcctggaacgccctt 76





>33475_bta-mir-1249:mirbase
          Length = 65

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                          
Query: 9  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 56
          ||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 1  gggaggagggaggagatgggccacgttccctctgcctggaacgccctt 48





>32398_mmu-mir-1249:mirbase
          Length = 98

 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                            
Query: 7  tggggaggagggaggagatgggccaagttccctctggctggaacgccctt 56
          ||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 16 tggggaggagggaggggatgggccaagttccctatgcctggaacgccctt 65