miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01960;SSU_rRNA_eukarya;AAYZ01438197.1/1-1685 9978:Ochotona
princeps (American pika)
Length = 1685
Score = 226 bits (114), Expect = 6e-59
Identities = 133/138 (96%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 1 atgtggcgtacggaagacccgctccccggcgccgctcgtggggggccctttgtccttctg 60
|||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 302 atgtggcgtacggaagccccactccccggcgccgctcgtggggggcccaa-gtccttctg 244
Query: 61 atcgaggcccagcccgtggacggtgtgaggccggtagcggcccccggcgcgccgggcccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atcgaggcccagcccgtggacggtgtgaggccggtagcggcccccggcgcgccgggcccg 184
Query: 121 ggtcttcccggagtcggg 138
||||||||||||||||||
Sbjct: 183 ggtcttcccggagtcggg 166
