miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 41 gccaaaaccgcaattacttttgcacctacctaata 75
|||||||||||||||||||||||||| ||||||||
Sbjct: 50 gccaaaaccgcaattacttttgcaccaacctaata 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 43 caaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 33 caaaactgcaattacttttgcactaacctaata 1
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| ||||||||
Sbjct: 53 aaaaccgcaattacttttgcaccaacctaata 84
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| ||||||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| ||||||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| ||||||||
Sbjct: 55 aaaaccgcaattacttttgcaccaacctaata 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| || |||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacataata 1
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| ||||||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| ||||||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaat 74
||||||||||||||||||||||| |||||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacctaat 2
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 41 gccaaaaccgcaattacttttgcacctacctaata 75
|||||||||||||||||||| ||||| ||||||||
Sbjct: 35 gccaaaaccgcaattactttagcaccaacctaata 1
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 41 gccaaaaccgcaattacttttgcacctacctaata 75
||||||||| |||||||||||||||| ||||||||
Sbjct: 35 gccaaaaccacaattacttttgcaccaacctaata 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||| ||||||||||||||||| ||||||||
Sbjct: 53 aaaactgcaattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01272376.1/8292-8209 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 45 aaaccgcaattacttttgcacctacctaata 75
|||||||||||||||||||||| ||||||||
Sbjct: 54 aaaccgcaattacttttgcaccaacctaata 84
>RF01061;mir-548;ABGA01258901.1/11428-11345 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 42 ccaaaaccgcaattacttttgcacctacctaata 75
||||||| ||||||||||||||||| ||||||||
Sbjct: 51 ccaaaactgcaattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaa 73
||||||||||||||||||||||| ||||||
Sbjct: 53 aaaaccgcaattacttttgcaccaacctaa 82
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 46 aaccgcaattacttttgcacctacctaat 74
||||||||||||||||||||| |||||||
Sbjct: 30 aaccgcaattacttttgcaccaacctaat 2
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctaccta 72
||||||||||||||||||||||| |||||
Sbjct: 53 aaaaccgcaattacttttgcaccaaccta 81
>RF01061;mir-548;CABD01117548.1/2434-2351 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 39 ttgccaaaaccgcaattacttttgcacctacctaata 75
|||| ||||||||||||||||||||||| |||||||
Sbjct: 48 ttgcaaaaaccgcaattacttttgcaccagcctaata 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 39 ttgccaaaaccgcaattacttttgcacctacctaata 75
|||||| ||| ||||||||||||||||| ||| ||||
Sbjct: 37 ttgccagaactgcaattacttttgcaccaaccaaata 1
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacct 71
||||||||||||||||||||||| ||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacct 5
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||| |||||||||||||| ||||||||
Sbjct: 53 aaaaccgctattacttttgcaccaacctaata 84
>RF01061;mir-548;AACZ02022871.1/5823-5909 9598:Pan troglodytes
(chimpanzee)
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||||||| |||||||||| ||||||||
Sbjct: 32 aaaaccgcaattgcttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02112099.1/25061-25144 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02061421.1/862-945 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 53 aaaaccacaattacttttgcaccgacctaata 84
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| || |||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacataata 1
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacc 66
|||||||||||||||||||||||
Sbjct: 57 aaaaccgcaattacttttgcacc 79
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| ||| ||||
Sbjct: 32 aaaaccgcaattacttttgcaccaaccgaata 1
>RF01061;mir-548;AC104441.2/115021-115102 9606:Homo sapiens
(human)
Length = 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||||||||||| |||||| ||||||||
Sbjct: 32 aaaaccgcaattacttctgcaccaacctaata 1
>RF01061;mir-548;AADB02011926.1/1109567-1109484 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||| |||||||||||||||||| ||||||||
Sbjct: 32 aaaaacgcaattacttttgcaccaacctaata 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||| ||||||||||||| ||||||||
Sbjct: 53 aaaaccgcagttacttttgcaccaacctaata 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 aagtaactgcggtttttgcca 44
|||||||||||||||||||||
Sbjct: 68 aagtaactgcggtttttgcca 48
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| |||||||
Sbjct: 53 aaaaccgcaattacttttgcaccagcctaata 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacc 66
|||||||||||||||||||||||
Sbjct: 32 aaaaccgcaattacttttgcacc 10
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||| | ||||||||
Sbjct: 53 aaaaccgcaattacttttgcaacaacctaata 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgca 64
|||||||||||||||||||||
Sbjct: 32 aaaaccgcaattacttttgca 12
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;ABSL01074616.1/61238-61321 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacct 71
||||| ||||||||||||||||||||||
Sbjct: 53 aaaactgcaattacttttgcacctacct 80
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||||||||||||||| || ||||||||
Sbjct: 32 aaaaccgcaattacttttgcgccaacctaata 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||||||||||||||| || ||||||||
Sbjct: 64 aaaaccgcaattacttttgcgccaacctaata 95
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 48 ccgcaattacttttgcacctacctaata 75
||||||||||||||||||| ||||||||
Sbjct: 28 ccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01524054.2/315-398 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||| | ||||||||
Sbjct: 32 aaaaccgcaattacttttgcaacaacctaata 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||||||| |||||||||| ||||||||
Sbjct: 53 aaaaccgcaatttcttttgcaccaacctaata 84
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| || |||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacataata 1
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||| ||||||||||||| ||||||||
Sbjct: 53 aaaaccgcacttacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 32 aaaaccacaattacttttgcacccacctaata 1
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||| |||||||||||||||| ||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 48 ccgcaattacttttgcacctacctaata 75
||||||||||||||||||| ||||||||
Sbjct: 28 ccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01261834.1/7167-7084 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||||| |||||||||||| ||||||||
Sbjct: 53 aaaaccgcaactacttttgcaccaacctaata 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 45 aaaccgcaattacttttgcacctacctaata 75
||||| |||||||||||||||| ||||||||
Sbjct: 31 aaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01106767.1/8226-8143 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||||||||||||||||||||| |||||||
Sbjct: 53 aaaaccgcaattacttttgcaccagcctaata 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctaccta 72
||||| ||||||||||| |||||||||||
Sbjct: 32 aaaactgcaattactttcgcacctaccta 4
>RF01061;mir-548;AANU01236941.1/3584-3501 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
|||||||||||| |||||||||| ||||||||
Sbjct: 53 aaaaccgcaattgcttttgcaccaacctaata 84
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacct 71
||||||||||||||||||||||| ||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacct 5
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 47 accgcaattacttttgcacctacctaata 75
|||||||||||||||||||| || |||||
Sbjct: 56 accgcaattacttttgcaccaacataata 84
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacc 66
|||||||||||||||||||||||
Sbjct: 32 aaaaccgcaattacttttgcacc 10
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacc 66
|||||||||||||||||||||||
Sbjct: 53 aaaaccgcaattacttttgcacc 75
>RF01061;mir-548;AADC01142453.1/7445-7528 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 46 aaccgcaattacttttgcacctaccta 72
|||||||||||||||||||||| ||||
Sbjct: 55 aaccgcaattacttttgcacctgccta 81
>RF01061;mir-548;AADD01165731.1/6332-6415 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 45 aaaccgcaattacttttgcacctacctaata 75
||||| |||||||||||||||| ||||||||
Sbjct: 31 aaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AADB02011915.1/382962-383045 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 49 cgcaattacttttgcacctacctaata 75
|||||||||||||||||| ||||||||
Sbjct: 58 cgcaattacttttgcaccgacctaata 84
>RF01061;mir-548;ABSL01073318.1/15548-15465 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacc 66
|||||||||||||||||||||||
Sbjct: 32 aaaaccgcaattacttttgcacc 10
>RF01061;mir-548;AADC01022461.1/57990-57907 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 48 ccgcaattacttttgcacctacctaat 74
||||||||||||||||||| |||||||
Sbjct: 57 ccgcaattacttttgcaccaacctaat 83
>RF01061;mir-548;AC121493.1/11246-11329 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 45 aaaccgcaattacttttgcacctacctaata 75
||||| |||||||||||||||| ||||||||
Sbjct: 54 aaaccacaattacttttgcaccaacctaata 84
>RF01061;mir-548;CABD01214541.1/743-661 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 46.1 bits (23), Expect = 6e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 41 gccaaaaccgcaattacttttgcacctacctaata 75
|||||||| ||||| ||||||||||| ||||||||
Sbjct: 49 gccaaaactgcaatgacttttgcacccacctaata 83
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 43 caaaaccgcaattacttttgcacctacctaata 75
|||||| ||||| ||||||||||| ||||||||
Sbjct: 33 caaaactgcaatgacttttgcaccaacctaata 1
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacc 66
|||||||||||||||||||||||
Sbjct: 32 aaaaccgcaattacttttgcacc 10
>RF01061;mir-548;ABGA01086348.1/10388-10471 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaa 73
|||||||||||||| |||||||| ||||||
Sbjct: 32 aaaaccgcaattacatttgcaccaacctaa 3
>RF01061;mir-548;AACZ02123200.1/20871-20786 9598:Pan troglodytes
(chimpanzee)
Length = 86
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 gcaattacttttgcacctacctaata 75
||||||||||||||||| ||||||||
Sbjct: 61 gcaattacttttgcaccaacctaata 86
Score = 42.1 bits (21), Expect = 0.001
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaata 75
||||| |||||||||||||| || ||||||||
Sbjct: 32 aaaacagcaattacttttgcnccaacctaata 1
>RF01061;mir-548;AL023583.25/57094-57177 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctacctaa 73
|||||||||| |||||||||||| ||||||
Sbjct: 53 aaaaccgcaactacttttgcaccaacctaa 82
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 50 gcaattacttttgcacctacctaata 75
||||||||||||||||| ||||||||
Sbjct: 26 gcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctacctaa 73
|||||||||||||||||||| || ||||||
Sbjct: 32 aaaaccgcaattacttttgctccaacctaa 3
>RF01061;mir-548;CABD01155376.1/1695-1778 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 50 gcaattacttttgcacctacctaata 75
|||||||| |||||||||||||||||
Sbjct: 26 gcaattacctttgcacctacctaata 1
>RF01061;mir-548;CABD01319512.1/496-413 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 46 aaccgcaattacttttgcacctacctaata 75
|||||||||||||||||||| ||||||||
Sbjct: 30 aaccgcaattacttttgcacaaacctaata 1
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 aagtaactgcggtttttgcca 44
|||||||||||||||||||||
Sbjct: 68 aagtaactgcggtttttgcca 48
>RF01061;mir-548;AANU01015630.1/1898-1815 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 gcaattacttttgcacctacctaata 75
||||||||||||||||| ||||||||
Sbjct: 59 gcaattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01270843.1/85523-85605 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 39 ttgccaaaaccgcaattacttttgca 64
|||| |||||||||||||||||||||
Sbjct: 47 ttgcaaaaaccgcaattacttttgca 72
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 43 caaaaccgcaattacttttgcacctacct 71
||||||| |||||||||||||||| ||||
Sbjct: 33 caaaaccacaattacttttgcaccaacct 5
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 46 aaccgcaattacttttgcacctacctaata 75
|||| |||||||||||||||| ||||||||
Sbjct: 30 aaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01115116.1/14393-14310 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 50 gcaattacttttgcacctacctaata 75
||||||||||||||||| ||||||||
Sbjct: 26 gcaattacttttgcaccaacctaata 1
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctaccta 72
||||| ||||||||||||||||| |||||
Sbjct: 53 aaaactgcaattacttttgcaccaaccta 81
>RF01061;mir-548;AACZ02184973.1/13727-13644 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 24 aagtaactgcggtttttgcca 44
|||||||||||||||||||||
Sbjct: 68 aagtaactgcggtttttgcca 48
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgca 64
|||||||||||||||||||||
Sbjct: 53 aaaaccgcaattacttttgca 73
>RF01061;mir-548;AADC01015752.1/126987-127070 9606:Homo sapiens
(human)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctaccta 72
|||||||||||||| |||||||| |||||
Sbjct: 32 aaaaccgcaattacatttgcaccaaccta 4
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 caattacttttgcacctacctaata 75
|||||||||||||||| ||||||||
Sbjct: 60 caattacttttgcaccaacctaata 84
>RF01061;mir-548;CABD01078688.1/32-114 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 43 caaaaccgcaattacttttgcacctacctaata 75
|||||| || |||||||||||||| ||||||||
Sbjct: 51 caaaactgcgattacttttgcaccaacctaata 83
>RF01061;mir-548;CABD01149968.2/8500-8417 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 44 aaaaccgcaattacttttgcacctaccta 72
||||||||| ||||||||||||| |||||
Sbjct: 53 aaaaccgcagttacttttgcaccaaccta 81
>RF01061;mir-548;CABD01378151.1/10643-10726 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 caattacttttgcacctacctaata 75
|||||||||||||||| ||||||||
Sbjct: 60 caattacttttgcaccaacctaata 84
>RF01061;mir-548;CABD01558585.2/283-366 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 44 aaaaccgcaattacttttgcacctaccta 72
|||||||| |||||||||||||| |||||
Sbjct: 32 aaaaccgccattacttttgcaccaaccta 4
