miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 21 caaaaataattgcggtttttgccatt---aatagtggcaaaaactacaattaattttgtg 77
||||| |||||||||||||||||||| | || |||||||||| ||||||| |||||||
Sbjct: 14 caaaagtaattgcggtttttgccattgaaagtaatggcaaaaaccacaattacttttgtg 73
Query: 78 ccaacctaata 88
|| ||||||||
Sbjct: 74 cccacctaata 84
>RF01061;mir-548;AANU01235723.1/7676-7593 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 66/77 (85%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 15 ttggtacaaaaataattgcggtttttgccatt---aatagtggcaaaaactacaattaat 71
||||||||||||||||||| |||||||||||| | || |||| ||| || |||||| |
Sbjct: 8 ttggtacaaaaataattgcagtttttgccattgaaagtaatggccaaagctgcaattact 67
Query: 72 tttgtgccaacctaata 88
||||| |||||||||||
Sbjct: 68 tttgtaccaacctaata 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 70/84 (83%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaat---agtggcaaaaactac 64
||||| |||||||||||| ||||||| | ||| ||||||| | | ||||||||||| |
Sbjct: 84 tattaggttggtacaaaagtaattgcagctttggccattactttcaatggcaaaaactgc 25
Query: 65 aattaattttgtgccaacctaata 88
||||| |||||| |||| ||||||
Sbjct: 24 aattatttttgtaccaagctaata 1
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccat 45
|||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 tattatgttggtgcaaaagtaattgcggtttttgccat 38
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 11 tatgttggtacaaaaataattgcggtttttgccattaa 48
||||||||| ||||| ||||||||||||||||||||||
Sbjct: 85 tatgttggtgcaaaagtaattgcggtttttgccattaa 48
>RF01061;mir-548;ABSL01068449.1/36486-36403 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 71/84 (84%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaa---tagtggcaaaaactac 64
||||| ||||| |||||| |||||| || |||||||||||| || ||| ||||||| |
Sbjct: 1 tattaggttggcacaaaagtaattgtggcttttgccattaaaagtaatggtaaaaactgc 60
Query: 65 aattaattttgtgccaacctaata 88
||||| ||| ||||||||||||||
Sbjct: 61 aattactttcgtgccaacctaata 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 70/84 (83%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaat---agtggcaaaaactac 64
||||| ||||| || ||| ||||||| |||||| |||||| | | |||||||| | ||
Sbjct: 84 tattaggttggcacgaaagtaattgcagtttttaccattacttttaatggcaaaagccac 25
Query: 65 aattaattttgtgccaacctaata 88
||||| ||||||||||||||||||
Sbjct: 24 aattacttttgtgccaacctaata 1
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccat 45
|||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 tattatgttggtgcaaaagtaattgcggtttttgccat 38
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 71/84 (84%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaatag---tggcaaaaactac 64
||||| |||||| ||||| ||| ||||||||||||||| | | | |||||||||| ||
Sbjct: 84 tattaggttggtgcaaaagtaagtgcggtttttgccatcacttgcaatggcaaaaaccac 25
Query: 65 aattaattttgtgccaacctaata 88
||||| |||||| |||||||||||
Sbjct: 24 aattacttttgtaccaacctaata 1
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatt 46
||||| |||||||||||| |||||| |||||||||||||
Sbjct: 1 tattaggttggtacaaaagtaattgtggtttttgccatt 39
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 65/76 (85%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 16 tggtacaaaaataattgcggtttttgccatt---aatagtggcaaaaactacaattaatt 72
|||| ||||| |||||||||||||||||||| |||| |||||||||| |||||| ||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgccattggaaataatggcaaaaaccgcaattactt 68
Query: 73 ttgtgccaacctaata 88
|||| ||||||||||
Sbjct: 69 ttgtatcaacctaata 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatta 47
||||| |||| ||||||| |||||||||||||||||||||
Sbjct: 84 tattaggttgatacaaaagtaattgcggtttttgccatta 45
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaa 48
||||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgccattaa 41
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 tggtacaaaaataattgcggtttttgccatta 47
|||||||||||||||||| |||||||||||||
Sbjct: 76 tggtacaaaaataattgctgtttttgccatta 45
Score = 54.0 bits (27), Expect = 3e-07
Identities = 68/81 (83%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaa---tagtggcaaaaactac 64
||||| |||||| ||||| ||||||||| |||||||||||| || |||||||||| |
Sbjct: 1 tattaggttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaaacagc 60
Query: 65 aattaattttgtgccaaccta 85
||||| |||||| ||| ||||
Sbjct: 61 aattatttttgtaccagccta 81
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 66/78 (84%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 14 gttggtacaaaaataattgcggtttttgccattaa---tagtggcaaaaactacaattaa 70
|||||||||||| |||||||| |||||| || ||| ||||||||||||| ||||||
Sbjct: 78 gttggtacaaaagtaattgcgatttttggcactaaaagtagtggcaaaaaccgcaattac 19
Query: 71 ttttgtgccaacctaata 88
||||| |||||||||||
Sbjct: 18 ttttgcaccaacctaata 1
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgcca 44
||||| |||||| ||||| ||||||||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgcca 37
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatta 47
|||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 84 tattatgttggtgcaaaagtaattgcggtctttgccatta 45
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 15 ttggtacaaaaataattgcggtttttgccatt 46
||||||||||| ||||||||||||||||||||
Sbjct: 77 ttggtacaaaagtaattgcggtttttgccatt 46
Score = 44.1 bits (22), Expect = 3e-04
Identities = 69/84 (82%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaatag---tggcaaaaactac 64
||||| |||||| ||||| ||||| |||||||||||| || || |||||||||| |
Sbjct: 1 tattaggttggtgcaaaagtaattatggtttttgccatcaaaagcaatggcaaaaaccgc 60
Query: 65 aattaattttgtgccaacctaata 88
||||| |||||| |||| ||||||
Sbjct: 61 aattacttttgtaccaatctaata 84
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 56/65 (86%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 14 gttggtacaaaaataattgcggtttttgccatt---aatagtggcaaaaactacaattaa 70
|||||| ||||| |||||||||||||||||||| | ||||||||||||| ||||||
Sbjct: 7 gttggtgcaaaagtaattgcggtttttgccattgacagtagtggcaaaaaccgcaattag 66
Query: 71 ttttg 75
|||||
Sbjct: 67 ttttg 71
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 14 gttggtacaaaaataattgcggtttttgccattaa 48
|||||| ||||| ||||||||||||||||||||||
Sbjct: 7 gttggtgcaaaagtaattgcggtttttgccattaa 41
>RF01061;mir-548;AADB02060964.1/614-531 9606:Homo sapiens (human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 65/77 (84%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 15 ttggtacaaaaataattgcggtttttgccattaat---agtggcaaaaactacaattaat 71
||||| ||||||||||||| |||||||||| || | ||||||||||||| |||||| |
Sbjct: 77 ttggtgcaaaaataattgcagtttttgccactactttcagtggcaaaaactgcaattact 18
Query: 72 tttgtgccaacctaata 88
|||| |||| ||||||
Sbjct: 17 tttgcaccaaactaata 1
Score = 46.1 bits (23), Expect = 8e-05
Identities = 64/77 (83%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 15 ttggtacaaaaataattgcggtttttgccattaa---tagtggcaaaaactacaattaat 71
||||| ||||| ||||||| |||||||||| | | |||||||||||||| |||||| |
Sbjct: 8 ttggtgcaaaagtaattgcagtttttgccactgaaagtagtggcaaaaactgcaattatt 67
Query: 72 tttgtgccaacctaata 88
|||| |||| ||||||
Sbjct: 68 tttgcaccaaactaata 84
>RF01061;mir-548;ABSL01074616.1/61238-61321 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatt 46
||||| |||||| ||||||||||||| ||||||||||||
Sbjct: 1 tattaggttggtgcaaaaataattgcagtttttgccatt 39
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatt 46
||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 84 tattaggttggtgcaaaagtaattgcggtttttgccatt 46
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatt 46
||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgccatt 39
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 15 ttggtacaaaaataattgcggtttttgccattaa 48
||||| ||||| ||||||||||||||||||||||
Sbjct: 8 ttggtgcaaaagtaattgcggtttttgccattaa 41
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 14 gttggtacaaaaataattgcggtttttgccatta 47
|||||| ||||| |||||||||||||||||||||
Sbjct: 78 gttggtgcaaaagtaattgcggtttttgccatta 45
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 14 gttggtacaaaaataattgcggtttttgccatta 47
|||||| ||||| |||||||||||||||||||||
Sbjct: 78 gttggtgcaaaagtaattgcggtttttgccatta 45
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 70/84 (83%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaatag---tggcaaaaactac 64
||||| |||||| ||||| ||| ||| |||||||||||||| || ||||||||| ||
Sbjct: 1 tattaggttggtgcaaaagtaagtgctgtttttgccattaaaagtcatggcaaaaataac 60
Query: 65 aattaattttgtgccaacctaata 88
||||| ||||| |||||||||||
Sbjct: 61 aattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01260291.1/17494-17411 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 70/84 (83%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatta---atagtggcaaaaactac 64
||||| |||||| |||||||||||||| ||||||| |||| || ||||| |||| ||
Sbjct: 84 tattaggttggtgcaaaaataattgcgatttttgcaattacttttaatggcagaaaccac 25
Query: 65 aattaattttgtgccaacctaata 88
||||| ||||| |||||||||||
Sbjct: 24 aattatttttgcaccaacctaata 1
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaa 48
||||| |||||| |||||||||||| ||||| |||||||||
Sbjct: 1 tattaggttggtgcaaaaataattgtggtttctgccattaa 41
>RF01061;mir-548;AANU01283759.1/9595-9678 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 70/84 (83%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaatagt---ggcaaaaactac 64
||||| |||||||||||| | ||| |||||||| |||||| ||| |||||||||| |
Sbjct: 1 tattaggttggtacaaaagcatttgtggtttttgtcattaaaagtaatggcaaaaactgc 60
Query: 65 aattaattttgtgccaacctaata 88
||||| |||||| ||| |||||||
Sbjct: 61 aattacttttgtaccagcctaata 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 16 tggtacaaaaataattgcggtttttgccatta 47
|||||||||| ||||||| |||||||||||||
Sbjct: 76 tggtacaaaagtaattgcagtttttgccatta 45
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 tggtacaaaaataattgcggtttttgccattaa 48
|||| ||||| ||||||||||||||||||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgccattaa 41
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 16 tggtacaaaaataattgcggtttttgccatt 46
|||| ||||| ||||||||||||||||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttttgccatt 46
>RF01061;mir-548;AACZ02012902.1/7610-7693 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatta 47
||||| |||||||||||| | ||||||| |||||||||||
Sbjct: 84 tattaggttggtacaaaagtgattgcggcttttgccatta 45
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatta 47
||||| |||||| ||||| |||||| ||||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttttgccatta 40
>RF01061;mir-548;ABSL01073318.1/15548-15465 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 ttggtacaaaaataattgcggtttttgccatt 46
||||| ||||| ||||||||||||||||||||
Sbjct: 8 ttggtgcaaaagtaattgcggtttttgccatt 39
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttt 39
|||||||||||| ||||| |||||||||||||
Sbjct: 1 tattatgttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AANU01106767.1/8226-8143 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 16 tggtacaaaaataattgcggtttttgccatta 47
|||| ||||| |||||||||||||||||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttttgccatta 45
>RF01061;mir-548;ABGA01086348.1/10388-10471 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 14 gttggtacaaaaataattgcggtttttgccattaa 48
|||||| |||| ||||||||||||||||||||||
Sbjct: 7 gttggtgcaaatgtaattgcggtttttgccattaa 41
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccatt 46
||||| |||||| ||||| |||||| |||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttttgccatt 39
>RF01061;mir-548;AL160056.16/43591-43674 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 14 gttggtacaaaaataattgcggtttttgccattaa 48
|||||| ||| | ||||||||||||||||||||||
Sbjct: 7 gttggtgcaagagtaattgcggtttttgccattaa 41
>RF01061;mir-548;AADC01022461.1/57990-57907 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 9 attatgttggtacaaaaataattgcggtttttgccatta 47
|||| |||||| ||||| ||||||||| |||||||||||
Sbjct: 83 attaggttggtgcaaaagtaattgcgggttttgccatta 45
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 50 agtggcaaaaactacaattaattttgtgccaacctaata 88
|||||||||||| |||||| ||||| ||||||||||||
Sbjct: 39 agtggcaaaaaccgcaattacttttgcgccaacctaata 1
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgc 42
||||| |||||| ||||| ||||||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgc 35
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccat 45
||||| |||||| ||||| |||||| ||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttttgccat 38
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccat 45
||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 84 tattacgttggtgcaaaaatagttgcggtttttaccat 47
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 attatgttggtacaaaaataattgcggtttttgccatt 46
|||| |||||| ||||| |||||||||||||| |||||
Sbjct: 2 attaggttggtgcaaaagtaattgcggtttttaccatt 39
>RF01061;mir-548;AADB02011926.1/1109567-1109484 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccat 45
||||| |||||| ||||| ||| |||||||||||||||
Sbjct: 84 tattaggttggtgcaaaagtaactgcggtttttgccat 47
>RF01061;mir-548;AL023583.25/57094-57177 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 gttggtacaaaaataattgcggtttttgccatta 47
|||||| ||||| || ||||||||||||||||||
Sbjct: 78 gttggtgcaaaagtagttgcggtttttgccatta 45
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 ttggtacaaaaataattgcggtttttgccattaa 48
||||| ||||| |||||| |||||||||||||||
Sbjct: 8 ttggtgcaaaagtaattgtggtttttgccattaa 41
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 caaaaataattgcggtttttgccatt 46
||||| ||||||||||||||||||||
Sbjct: 14 caaaagtaattgcggtttttgccatt 39
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 attatgttggtacaaaaataattgcggtttttgccatt 46
|||| |||||| ||||| ||||||||||| ||||||||
Sbjct: 2 attaggttggtgcaaaagtaattgcggttcttgccatt 39
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 69/84 (82%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaatagt---ggcaaaaactac 64
||||| |||||| ||||| | ||||| |||||||||||||| ||| |||||||| ||
Sbjct: 84 tattaggttggtgcaaaagtgattgcagtttttgccattaaaagtaacagcaaaaaccac 25
Query: 65 aattaattttgtgccaacctaata 88
||| | ||||| |||||||||||
Sbjct: 24 aatcacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01524054.2/315-398 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 69/84 (82%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaa---tagtggcaaaaactac 64
||||| |||| | ||||| |||||||||||||||| ||| | ||||||||||||| |
Sbjct: 1 tattaggttgttgcaaaagtaattgcggtttttgctattgaagctagtggcaaaaaccgc 60
Query: 65 aattaattttgtgccaacctaata 88
|||| ||||| |||||||||||
Sbjct: 61 aatttcttttgcaccaacctaata 84
>RF01061;mir-548;CABD01524540.2/42-125 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 69/84 (82%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaatag---tggcaaaaactac 64
||||| ||||| ||||| |||||| ||||||||||||||| || |||||||||| |
Sbjct: 1 tattaagttggagcaaaagtaattgtggtttttgccattaaaagcgatggcaaaaaccgc 60
Query: 65 aattaattttgtgccaacctaata 88
||||| | ||| |||||||||||
Sbjct: 61 aattactgttgctccaacctaata 84
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 60/72 (83%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 20 acaaaaataattgcggtttttgccattaatagt---ggcaaaaactacaattaattttgt 76
|||||| ||| ||||||||| |||||||| ||| ||| ||||| ||||||| |||||
Sbjct: 72 acaaaagtaactgcggttttcgccattaaaagtaatggcgaaaaccacaattacttttgc 13
Query: 77 gccaacctaata 88
|||||||||||
Sbjct: 12 accaacctaata 1
>RF01061;mir-548;AANU01199994.1/1877-1794 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 69/84 (82%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 tattatgttggtacaaaaataattgcggtttttgccattaatagt---ggcaaaaactac 64
||||| |||||| |||| ||||||| ||||||| ||||| | ||| ||||||| | ||
Sbjct: 1 tattaggttggtgcaaacataattgtggtttttaccattgaaagtaatggcaaaacccac 60
Query: 65 aattaattttgtgccaacctaata 88
||||| ||||| |||||||||||
Sbjct: 61 aattacgtttgtaccaacctaata 84
>RF01061;mir-548;AANU01255888.1/15264-15181 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 ttggtacaaaaataattgcggtttttgccattaa 48
||||| ||||| |||||| |||||||||||||||
Sbjct: 8 ttggtgcaaaagtaattgtggtttttgccattaa 41
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 gttggtacaaaaataattgcggtttttgccatta 47
|||||| ||||| ||||||||||||||| |||||
Sbjct: 78 gttggtgcaaaagtaattgcggtttttgtcatta 45
