miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 76.0 bits (37), Expect = 8e-14
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||||| ||| ||| | ||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 10 ggtgcaaaagtaagtgctgtttttgccattaaaagtcatggcaaaaataacaattacttt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
>RF01061;mir-548;ABBV01001495.1/1250-1333 447454:candidate
division TM7 single-cell isolate TM7a
Length = 84
Score = 76.0 bits (37), Expect = 8e-14
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
|||||| || ||||||||| ||||||||| |||||| ||||||||| || |||||| ||
Sbjct: 10 ggtgcataagtaattgcagtttttgccattaaaagtaatggcaaaacccgcaattacttg 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
Score = 51.5 bits (25), Expect = 2e-06
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaat 87
||||||||||| |||||| ||||| |||||||||||
Sbjct: 38 atggcaaaaactgcaattacttatgcaccaacctaat 2
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 74.0 bits (36), Expect = 3e-13
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||||| ||||||| | ||||||||| |||||| |||||||||||| |||||| ||
Sbjct: 10 ggtgcaaaagtaattgcggtttttgccattaaaagtaatggcaaaaaccgcaattacttt 69
Query: 74 tgmaccaacc 83
|| |||||||
Sbjct: 70 tgcaccaacc 79
>RF01061;mir-548;AC104441.2/115021-115102 9606:Homo sapiens
(human)
Length = 82
Score = 74.0 bits (36), Expect = 3e-13
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccataaaagtcatggcaaaaaccacaattamttat 74
|||||| || ||||||| | |||||| |||||||| |||||| |||||||||||| || |
Sbjct: 10 ggtgcagaagtaattgcggtttttgctataaaagt-atggcataaaccacaattacttct 68
Query: 75 gmaccaacctaata 88
| ||||||||||||
Sbjct: 69 gcaccaacctaata 82
Score = 47.4 bits (23), Expect = 3e-05
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 54 gcaaaaaccacaattamttatgmaccaacctaata 88
||||||||| |||||| || || ||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttctgcaccaacctaata 1
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 71.9 bits (35), Expect = 1e-12
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 17 tgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamttatg 75
||||||| ||||||||| ||||||||| |||||| ||| ||||| || |||||| || ||
Sbjct: 73 tgcaaaagtaattgcagtttttgccattaaaagtaatgtcaaaacccgcaattacttttg 14
Query: 76 maccaacctaata 88
||||||||||||
Sbjct: 13 caccaacctaata 1
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 69.9 bits (34), Expect = 5e-12
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 43 taaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||| ||||||||||||||||||| || || ||||||||||||
Sbjct: 46 taaaagtaatggcaaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens
(human)
Length = 84
Score = 67.8 bits (33), Expect = 2e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||||| | ||||||| ||||||||| |||||| | |||||||||||||| | ||
Sbjct: 75 ggtgcaaaagtgattgcagtttttgccattaaaagtaacagcaaaaaccacaatcacttt 16
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 15 tgcaccaacctaata 1
>RF01061;mir-548;AANU01106767.1/8226-8143 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 67.8 bits (33), Expect = 2e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||| ||| ||||||||| |||| |||| |||||| |||||||||||| |||||| ||
Sbjct: 10 ggtgcgaaagtaattgcagtttttaccattaaaagtaatggcaaaaaccgcaattacttt 69
Query: 74 tgmaccaacctaata 88
|| |||| |||||||
Sbjct: 70 tgcaccagcctaata 84
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 65.8 bits (32), Expect = 9e-11
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 49 tcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||||||| || || ||||||||||||
Sbjct: 40 tcatggcaaaaaccacaattacttttgcaccaacctaata 1
Score = 55.6 bits (27), Expect = 1e-07
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||||| |||||| | ||||||||| ||||||||||| ||||||| ||| || ||
Sbjct: 10 ggtgcaaaagtaattgtggtttttgccatgaaaagtcatggtaaaaaccgcaactatttt 69
Query: 74 tgmaccaacctaata 88
|| |||||| |||||
Sbjct: 70 tgcaccaacgtaata 84
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 65.8 bits (32), Expect = 9e-11
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||||| ||||||| | ||||||||| |||||| || |||||||||||||||| ||
Sbjct: 10 ggtgcaaaagtaattgcggtttttgccattaaaagtaattgcaaaaaccacaattacttt 69
Query: 74 tgmaccaacc 83
| |||||||
Sbjct: 70 tacaccaacc 79
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||| |||||| || || ||||||| ||||
Sbjct: 38 atggcaaaaaccgcaattacttttgcaccaaccgaata 1
>RF01061;mir-548;AADD01165731.1/6332-6415 9606:Homo sapiens
(human)
Length = 84
Score = 63.8 bits (31), Expect = 4e-10
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 17 tgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamttatg 75
||||||| |||||| | ||||||||| ||||| |||||| |||||||||||| || ||
Sbjct: 73 tgcaaaagtaattgtggcttttgccattaaaagcaatggcagaaaccacaattacttttg 14
Query: 76 maccaacctaata 88
||||||||||||
Sbjct: 13 caccaacctaata 1
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 61.7 bits (30), Expect = 2e-09
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||||| || || ||||||||||||
Sbjct: 38 atggcaaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02061421.1/862-945 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 61.7 bits (30), Expect = 2e-09
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 43 taaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||| ||||||||||||||||||| || || ||| ||||||||
Sbjct: 39 taaaagtaatggcaaaaaccacaattacttttgcaccgacctaata 84
>RF01061;mir-548;AL008721.1/97595-97678 9606:Homo sapiens (human)
Length = 84
Score = 61.7 bits (30), Expect = 2e-09
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaac 61
||||||||| ||||||||| ||||||||| |||||| |||||||||||
Sbjct: 10 ggtgcaaaagtaattgcagcttttgccattaaaagtaatggcaaaaac 57
>RF01061;mir-548;AC099678.2/65387-65470 9606:Homo sapiens (human)
Length = 84
Score = 61.7 bits (30), Expect = 2e-09
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||||| || || ||||||||||||
Sbjct: 38 atggcaaaaaccacaattacttgtgcaccaacctaata 1
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 61.7 bits (30), Expect = 2e-09
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 43 taaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||| ||||| ||||||||||||| || || ||||||||||||
Sbjct: 46 taaaagtaatggcgaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AADB02011926.1/1109567-1109484 9606:Homo sapiens
(human)
Length = 84
Score = 59.7 bits (29), Expect = 6e-09
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgcca-taaaagtcatggcaaaaaccacaattamtta 73
||||||||| ||||||| ||||| || ||| |||||||||||||||| || ||| ||
Sbjct: 10 ggtgcaaaagtaattgcgttttttgtcaataacagtcatggcaaaaaccgcagttacttt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 59.7 bits (29), Expect = 6e-09
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccataaaagtca-tggcaaaaaccacaattamtta 73
||||||||| ||||||| | ||||||||| ||| || ||||||||||| |||||| ||
Sbjct: 10 ggtgcaaaagtaattgcggtttttgccattaaaaacaatggcaaaaaccgcaattacttt 69
Query: 74 tgmaccaacctaata 88
|| |||| |||||||
Sbjct: 70 tgcaccagcctaata 84
>RF01061;mir-548;CABD01629527.1/781-698 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 59.7 bits (29), Expect = 6e-09
Identities = 61/73 (83%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 17 tgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamttatg 75
||||||| | ||||||| ||||||||| |||||||||||||||||| |||| | || ||
Sbjct: 12 tgcaaaagttattgcagtttttgccatcaaaagtcatggcaaaaacygcaatgacttttg 71
Query: 76 maccaacctaata 88
| ||| ||||||
Sbjct: 72 cagcaaactaata 84
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 59.7 bits (29), Expect = 6e-09
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 15 ggtgcaaaartaattgcaggttttgccataaaagtca-tggcaaaaaccacaattamtta 73
||||||||| |||||||| ||||||||| | | ||| || ||||||||||||||| ||
Sbjct: 75 ggtgcaaaagcaattgcagtttttgccattacaatcaatgacaaaaaccacaattacttt 16
Query: 74 tgmaccaacctaata 88
|| | ||||||||||
Sbjct: 15 tgcagcaacctaata 1
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 59.7 bits (29), Expect = 6e-09
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgcc-ataaaagtcatggcaaaaaccacaattamtta 73
||||||||| |||||| | | ||||| |||||||| |||||||||||||||||| ||
Sbjct: 10 ggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccacaatttcttt 69
Query: 74 tgmaccaacctaata 88
|| ||||| ||||||
Sbjct: 70 tgcaccaaactaata 84
Score = 49.5 bits (24), Expect = 7e-06
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 53 ggcaaaaaccacaattamttatgmaccaacctaata 88
||||| ||||||||||| || || ||||||||||||
Sbjct: 36 ggcaagaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AADB02037333.1/77827-77910 9606:Homo sapiens
(human)
Length = 84
Score = 57.6 bits (28), Expect = 3e-08
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 45 aaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||| ||||||||||||||||| | || || ||||||||||||
Sbjct: 44 aaagtaatggcaaaaaccacaatcacttttgcaccaacctaata 1
>RF01061;mir-548;ABSL01074616.1/61238-61321 9606:Homo sapiens
(human)
Length = 84
Score = 57.6 bits (28), Expect = 3e-08
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 8 taagatwggtgcaaaartaattgcaggttttgccataaaagtca-tggcaaaaaccacaa 66
|||| | ||||||||| ||||||||| |||| |||| | |||| |||||||||| |||
Sbjct: 82 taaggtaggtgcaaaagtaattgcagtttttaccattactgtcaatggcaaaaactgcaa 23
Query: 67 ttamttatgmaccaacctaata 88
||| || || ||||||||||||
Sbjct: 22 ttatttttgcaccaacctaata 1
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 57.6 bits (28), Expect = 3e-08
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 18 gcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamtt 72
|||||| ||||||| | ||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 13 gcaaaagtaattgcggtttttgccattgaaagtaatggcaaaaaccacaattactt 68
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 57.6 bits (28), Expect = 3e-08
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||||| || || ||||||||||||
Sbjct: 38 atggcaaaaaccacaattacttttgtaccaacctaata 1
Score = 47.4 bits (23), Expect = 3e-05
Identities = 37/43 (86%)
Strand = Plus / Plus
Query: 46 aagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
|||| |||||||||||| || ||| || || ||||||||||||
Sbjct: 42 aagtgatggcaaaaaccgcacttacttttgcaccaacctaata 84
>RF01061;mir-548;ABGA01380877.1/47446-47363 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 55.6 bits (27), Expect = 1e-07
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 17 tgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamttatg 75
||||||| ||||||||| ||||||||| |||| ||||||||||| |||||| || ||
Sbjct: 12 tgcaaaagtaattgcagcttttgccattgaaagcaatggcaaaaactgcaattacttttg 71
Query: 76 maccaacct 84
||||||||
Sbjct: 72 caccaacct 80
>RF01061;mir-548;AANU01115116.1/14393-14310 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 55.6 bits (27), Expect = 1e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat 43
||||||||| |||||||||||||||||||
Sbjct: 10 ggtgcaaaagtaattgcaggttttgccat 38
>RF01061;mir-548;AC117179.4/116901-116818 9606:Homo sapiens
(human)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 15 ggtgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamtta 73
|||||||| ||||||| ||||||||| ||||| ||||||||||||||||||| |
Sbjct: 75 ggtgcaaacgtaattgcgatttttgccattgaaagtaatggcaaaaaccacaattacgtt 16
Query: 74 tgmaccaaccta 85
|| |||||||||
Sbjct: 15 tgcaccaaccta 4
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 64/78 (82%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 10 agatwggtgcaaaartaattgcaggttttgccataaaagtca-tggcaaaaaccacaatt 68
|||| ||||||||| ||||| ||| ||||||||| | | | |||||||||||||||||
Sbjct: 80 agattggtgcaaaagtaattacagtttttgccatcatttttaatggcaaaaaccacaatt 21
Query: 69 amttatgmaccaacctaa 86
| || || ||||| ||||
Sbjct: 20 acttttgcaccaatctaa 3
Score = 49.5 bits (24), Expect = 7e-06
Identities = 65/80 (81%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 agatwggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaatt 68
|||| ||||||||| |||||| | ||||||||| |||| | ||||||||||| ||||
Sbjct: 5 agattggtgcaaaagtaattgtggtttttgccattaaaaatgatggcaaaaactgtaatt 64
Query: 69 amttatgmaccaacctaata 88
| || || ||||| ||||||
Sbjct: 65 acttttgcaccaatctaata 84
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||| |||||| || || ||||||||||||
Sbjct: 47 atggcaaaaaccgcaattacttttgcaccaacctaata 84
>RF01061;mir-548;AC121493.1/11246-11329 9606:Homo sapiens (human)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||| |||||||||||| || || ||||||||||||
Sbjct: 47 atggcagaaaccacaattacttttgcaccaacctaata 84
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaac 61
||||||||| ||||||| | ||||||||| |||||| |||||||||||
Sbjct: 10 ggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaaac 57
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||| || |||||| || || ||||||||||||
Sbjct: 38 atggcaaaatccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 43 taaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||| ||||||||||| |||||| || || ||||||||||||
Sbjct: 46 taaaagtagtggcaaaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||| |||||| || || ||||||||||||
Sbjct: 38 atggcaaaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01007255.1/6013-6096 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||||| || || |||| |||||||
Sbjct: 38 atggcaaaaaccacaattacttttgcaccagcctaata 1
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 53.5 bits (26), Expect = 4e-07
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||| |||||| || || ||||||||||||
Sbjct: 38 atggcaaaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 53.5 bits (26), Expect = 4e-07
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||| ||||| || || ||||||||||||
Sbjct: 38 atggcaaaaaccataattacttttgcaccaacctaata 1
Score = 47.4 bits (23), Expect = 3e-05
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||||| ||||| | ||||||||| ||||| |||||||||||| |||||| ||
Sbjct: 10 ggtgcaaaagtaattatggtttttgccatcaaaagcaatggcaaaaaccgcaattacttt 69
Query: 74 tgmaccaacctaata 88
|| ||||| ||||||
Sbjct: 70 tgtaccaatctaata 84
>RF01061;mir-548;AC068058.12/13722-13805 9606:Homo sapiens (human)
Length = 84
Score = 51.5 bits (25), Expect = 2e-06
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaat 87
||||||||| ||||||||| || || |||||||||||
Sbjct: 47 atggcaaaacccacaattacttttgcaccaacctaat 83
>RF01061;mir-548;AL160056.16/43591-43674 9606:Homo sapiens (human)
Length = 84
Score = 51.5 bits (25), Expect = 2e-06
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||| | ||||||| | ||||||||| |||||| ||||||||| || ||||| |
Sbjct: 10 ggtgcaagagtaattgcggtttttgccattaaaagtaatggcaaaagtcaaaattactct 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 51.5 bits (25), Expect = 2e-06
Identities = 64/79 (81%), Gaps = 5/79 (6%)
Strand = Plus / Minus
Query: 15 ggtgcaaaartaattgcaggttttgccataaaagt-----catggcaaaaaccacaatta 69
||||||||| ||||||| | ||||||||| |||| ||||||||||||| ||||||
Sbjct: 79 ggtgcaaaagtaattgcggtttttgccattaaaggtatggcatggcaaaaaccgcaatta 20
Query: 70 mttatgmaccaacctaata 88
|| || |||||| |||||
Sbjct: 19 cttttgcaccaacataata 1
>RF01061;mir-548;AC011709.11/112131-112214 9606:Homo sapiens
(human)
Length = 84
Score = 51.5 bits (25), Expect = 2e-06
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
|||||||| |||| || | ||||||||| |||||| || |||||||||||| ||| |
Sbjct: 10 ggtgcaaatgtaatggcggtttttgccattaaaagtaattgcaaaaaccacagttacatt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 51.5 bits (25), Expect = 2e-06
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 45 aaagtcatggcaaaaaccacaattamttatgmaccaaccta 85
||||| |||||||||||| |||||| || || |||||||||
Sbjct: 41 aaagtaatggcaaaaaccgcaattacttttgcaccaaccta 81
>RF01061;mir-548;CABD01378151.1/10643-10726 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 51.5 bits (25), Expect = 2e-06
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamtta 73
||||||||| ||||| | ||||||||| ||||| | |||||||| |||||||| ||
Sbjct: 10 ggtgcaaaagaaattgtggattttgccattgaaagttacggcaaaaatcacaattacttt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||| |||||||| || || ||||||||||||
Sbjct: 38 atggcaaaatccacaatttcttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02112099.1/25061-25144 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 49.5 bits (24), Expect = 7e-06
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 57 aaaaccacaattamttatgmaccaacctaata 88
||||||||||||| || || ||||||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 49.5 bits (24), Expect = 7e-06
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 53 ggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||| || || | ||||||||||
Sbjct: 36 ggcaaaaaccacaattacttttgcatcaacctaata 1
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 49.5 bits (24), Expect = 7e-06
Identities = 61/74 (82%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 16 gtgcaaaartaattgcaggttttgccataaa-agtcatggcaaaaaccacaattamttat 74
|||||||| ||||||||| | ||||||| | ||| ||||||| ||| |||||| || |
Sbjct: 74 gtgcaaaagtaattgcagttcttgccattagcagtaatggcaagaactgcaattactttt 15
Query: 75 gmaccaacctaata 88
| ||||||||||||
Sbjct: 14 gcaccaacctaata 1
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 49.5 bits (24), Expect = 7e-06
Identities = 61/74 (82%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 16 gtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamttat 74
|||||||| ||||||||| ||| ||| |||||| |||| |||||| |||||| || |
Sbjct: 11 gtgcaaaagtaattgcagttttgttcattaaaagtagtggccaaaaccgcaattactttt 70
Query: 75 gmaccaacctaata 88
| ||||||||||||
Sbjct: 71 gcaccaacctaata 84
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 49.5 bits (24), Expect = 7e-06
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 57 aaaaccacaattamttatgmaccaacctaata 88
||||||||||||| || || ||||||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01260291.1/17494-17411 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 49.5 bits (24), Expect = 7e-06
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||| |||||||||||| || || ||||||||||||
Sbjct: 38 atggcagaaaccacaattatttttgcaccaacctaata 1
Score = 47.4 bits (23), Expect = 3e-05
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
||||||||| |||||| | || |||||| |||||| || ||||||| | |||||| ||
Sbjct: 10 ggtgcaaaaataattgtggtttctgccattaaaagtaattgcaaaaatcgcaattatttt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
>RF01061;mir-548;AANU01272376.1/8292-8209 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 49.5 bits (24), Expect = 7e-06
Identities = 61/74 (82%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 16 gtgcaaaartaattgcaggttttgcca-taaaagtcatggcaaaaaccacaattamttat 74
|||||||| ||||||| | |||||||| | ||||| |||| ||||| |||||| || |
Sbjct: 11 gtgcaaaagtaattgccgtttttgccactgaaagtaatggtggaaaccgcaattactttt 70
Query: 75 gmaccaacctaata 88
| ||||||||||||
Sbjct: 71 gcaccaacctaata 84
>RF01061;mir-548;AADA01152819.1/20739-20822 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 60/73 (82%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamtta 73
||||||||| || |||||| ||||||||| ||||| ||||||||||| ||| || |
Sbjct: 10 ggtgcaaaagtagttgcagtttttgccattgaaagtaatggcaaaaactgcaactactct 69
Query: 74 tgmaccaacctaa 86
|| ||||||||||
Sbjct: 70 tgcaccaacctaa 82
>RF01061;mir-548;AL023583.25/57094-57177 9606:Homo sapiens (human)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 60/73 (82%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccataa-aagtcatggcaaaaaccacaattamtta 73
||||||||| || |||| | ||||||||| |||| |||||||||||| ||| || ||
Sbjct: 10 ggtgcaaaagtagttgcggcttttgccattgcaagtaatggcaaaaaccgcaactacttt 69
Query: 74 tgmaccaacctaa 86
|| ||||||||||
Sbjct: 70 tgcaccaacctaa 82
>RF01061;mir-548;AADB02001154.1/69220-69137 9606:Homo sapiens
(human)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgcca-taaaagtcatggcaaaaacc 62
||||||||| |||| || |||||||||| | ||||| ||||||||||||
Sbjct: 10 ggtgcaaaagtaatggcgggttttgccattgaaagtaatggcaaaaacc 58
>RF01061;mir-548;AADC01022461.1/57990-57907 9606:Homo sapiens
(human)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 15 ggtgcaaaartaattgcaggttttgccat 43
||||||||| ||||||| |||||||||||
Sbjct: 75 ggtgcaaaagtaattgcgggttttgccat 47
Score = 45.4 bits (22), Expect = 1e-04
Identities = 36/42 (85%)
Strand = Plus / Plus
Query: 46 aagtcatggcaaaaaccacaattamttatgmaccaacctaat 87
|||| ||||||||| || |||||| || || |||||||||||
Sbjct: 42 aagtaatggcaaaacccgcaattacttttgcaccaacctaat 83
>RF01061;mir-548;AC126755.3/45-128 9606:Homo sapiens (human)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaaccta 85
||||||||||||||||| | || || |||||||||
Sbjct: 38 atggcaaaaaccacaatcacttttgcaccaaccta 4
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 54 gcaaaaaccacaattamttatgmaccaacctaata 88
||||||||| |||||| || || ||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01532844.1/1136-1053 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 47/55 (85%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 35 ttttgccat-aaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||| |||||| ||||||||| |||||| || | || ||||||||||||
Sbjct: 55 ttttgccattaaaagtaatggcaaaagccacaactacatttgcaccaacctaata 1
>RF01061;mir-548;CABD01195132.2/4219-4302 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 60/73 (82%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 17 tgcaaaartaattgcaggttttgccataaaagtc-atggcaaaaaccacaattamttatg 75
||||||| |||||||||||||||| || | || ||||||||| ||||| ||| || ||
Sbjct: 73 tgcaaaagtaattgcaggttttgctattactttcaatggcaaaacccacagttacttttg 14
Query: 76 maccaacctaata 88
| ||||||||||
Sbjct: 13 cagcaacctaata 1
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 50 catggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||| |||||| || || |||||| |||||
Sbjct: 39 catggcaaaaaccgcaattacttttgcaccaacataata 1
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccataa-aagtcatggcaaaaaccacaattamtta 73
||||||||| ||||||| | ||||||||| || | |||||||||||| |||||| ||
Sbjct: 10 ggtgcaaaagtaattgcggtttttgccattggaaataatggcaaaaaccgcaattacttt 69
Query: 74 tgmaccaacctaata 88
|| | ||||||||||
Sbjct: 70 tgtatcaacctaata 84
>RF01061;mir-548;AANU01261834.1/7167-7084 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 58 aaaccacaattamttatgmaccaacctaata 88
|||||||||||| || || ||||||||||||
Sbjct: 31 aaaccacaattacttttgcaccaacctaata 1
Score = 45.4 bits (22), Expect = 1e-04
Identities = 39/46 (84%)
Strand = Plus / Plus
Query: 43 taaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||| ||||||||||| ||| || || || ||||||||||||
Sbjct: 39 taaaagtagtggcaaaaaccgcaactacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01255888.1/15264-15181 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaa 81
||||||||||||||||||| || || |||||
Sbjct: 38 atggcaaaaaccacaattacttttgcaccaa 8
>RF01061;mir-548;AANU01235723.1/7676-7593 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 47.4 bits (23), Expect = 3e-05
Identities = 59/71 (83%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 19 caaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamttatgma 77
||||| ||||||||| ||||||||| ||||| ||||| ||| | |||||| || || |
Sbjct: 14 caaaaataattgcagtttttgccattgaaagtaatggccaaagctgcaattacttttgta 73
Query: 78 ccaacctaata 88
|||||||||||
Sbjct: 74 ccaacctaata 84
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacct 84
|||||||||||| |||||| || || ||||||||
Sbjct: 38 atggcaaaaaccgcaattacttttgcaccaacct 5
>RF01061;mir-548;AADA01051643.1/6626-6709 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||| ||||| | || || ||||||||||||
Sbjct: 38 atggcaaaaactacaatcacttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02184973.1/13727-13644 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacct 84
||||||||||||||| ||| || || ||||||||
Sbjct: 38 atggcaaaaaccacagttacttttgcaccaacct 5
>RF01061;mir-548;AACZ02167777.1/2446-2529 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 59/72 (81%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 18 gcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamttatgm 76
|||||| ||||| ||| ||||||||| ||||| |||||||||||| || | | || ||
Sbjct: 72 gcaaaaataattacagtttttgccattaaaagcaatggcaaaaaccgcagtcacttttgc 13
Query: 77 accaacctaata 88
|||||||||||
Sbjct: 12 cccaacctaata 1
>RF01061;mir-548;AC163751.3/6942-6859 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 66/82 (80%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 8 taagatwggtgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaa 66
|||| | ||||||||| | ||||| | ||||||||| ||| | |||||||||||| |||
Sbjct: 3 taagcttggtgcaaaagtgattgcggtttttgccattgaaaataatggcaaaaaccgcaa 62
Query: 67 ttamttatgmaccaacctaata 88
| | || || ||||| ||||||
Sbjct: 63 tcacttttgcaccaagctaata 84
>RF01061;mir-548;AC019159.8/76273-76190 9606:Homo sapiens (human)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||||||| || | || ||||||||||||
Sbjct: 38 atggcaaaaaccacaaatacatttgcaccaacctaata 1
>RF01061;mir-548;AC004963.2/156846-156763 9606:Homo sapiens
(human)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||| ||||||||| | || ||||||||||||
Sbjct: 38 atggcaaaagccacaattactgttgcaccaacctaata 1
>RF01061;mir-548;AADC01094388.1/15092-15175 9606:Homo sapiens
(human)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||| | || || |||||||||||
Sbjct: 38 atggcaaaaaccacaatgacttttgccccaacctaata 1
>RF01061;mir-548;CABD01201701.2/1726-1642 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 85
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||||||| || | || ||||||||||||
Sbjct: 38 atggcaaaaaccacaactactgttgcaccaacctaata 1
>RF01061;mir-548;CABD01524540.2/42-125 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||||| || || ||||| |||||
Sbjct: 38 atggcaaaaaccacaattacttttgctccaacttaata 1
Score = 45.4 bits (22), Expect = 1e-04
Identities = 59/72 (81%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 18 gcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamttatgm 76
|||||| |||||| | ||||||||| ||||| |||||||||||| |||||| | ||
Sbjct: 13 gcaaaagtaattgtggtttttgccattaaaagcgatggcaaaaaccgcaattactgttgc 72
Query: 77 accaacctaata 88
|||||||||||
Sbjct: 73 tccaacctaata 84
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 55 caaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||| || || ||| ||||||||
Sbjct: 34 caaaaaccacaattacttttgcacccacctaata 1
>RF01061;mir-548;AANU01199994.1/1877-1794 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 45 aaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||| ||||||||| ||||||||| | || ||||||||||||
Sbjct: 41 aaagtaatggcaaaacccacaattacgtttgtaccaacctaata 84
>RF01061;mir-548;AC195618.4/124253-124170 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||||||||| || || ||||||||||||
Sbjct: 38 atggcaaaaaccacaatagcttttgcaccaacctaata 1
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||||| || | || || ||||||||||||
Sbjct: 38 atggcaaaaaccacgataacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01113788.1/5460-5543 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 45.4 bits (22), Expect = 1e-04
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaata 88
|||||||||||||||||| || || | ||||||||||
Sbjct: 38 atggcaaaaaccacaattgcttttgcatcaacctaata 1
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 61/75 (81%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamtta 73
||||||| | ||||||| | ||||||||| ||| | ||| |||||||| | |||| ||
Sbjct: 10 ggtgcaagagtaattgcggtttttgccattgaaattaatgacaaaaaccgctattacttt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
>RF01061;mir-548;AACZ02022871.1/5823-5909 9598:Pan troglodytes
(chimpanzee)
Length = 87
Score = 43.3 bits (21), Expect = 5e-04
Identities = 32/37 (86%)
Strand = Plus / Minus
Query: 52 tggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||| ||||| || || ||||||||||||
Sbjct: 37 tggcaaaaaccgcaattgcttttgcaccaacctaata 1
>RF01061;mir-548;AC191392.1/146896-146813 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 48/57 (84%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 33 ggttttgccat-aaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||| |||||| ||| ||| | ||||||||| || | ||||||||||||
Sbjct: 28 ggttttgccattaaaagtaatgacaagacccacaattactttggcaccaacctaata 84
>RF01061;mir-548;AACZ02012902.1/7610-7693 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 47/55 (85%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 35 ttttgccat-aaaagtcatggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||| |||||| ||||||||| || |||| | || || ||||||||||||
Sbjct: 30 ttttgccattaaaagtaatggcaaaagccgcaatcacttttgtaccaacctaata 84
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 32/37 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaat 87
|||| ||||||| |||||| || || |||||||||||
Sbjct: 38 atggtaaaaaccgcaattacttttgcaccaacctaat 2
>RF01061;mir-548;AADB02016093.1/179805-179888 9606:Homo sapiens
(human)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 61/75 (81%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccataaaagtc-atggcaaaaaccacaattamtta 73
||||||||| |||| || ||||||||||| | || |||||||||||| |||| ||
Sbjct: 10 ggtgcaaaagtaatcgcgggttttgccattatgctcaatggcaaaaaccgtgattacttt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 32/37 (86%)
Strand = Plus / Minus
Query: 51 atggcaaaaaccacaattamttatgmaccaacctaat 87
||||||| |||| |||||| || || |||||||||||
Sbjct: 38 atggcaagaaccgcaattacttttgcaccaacctaat 2
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 61/75 (81%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamtta 73
||||| ||| ||||||| | ||| ||||| ||||| ||| |||||||| |||||| ||
Sbjct: 10 ggtgctaaagtaattgcggttttggccattgaaagtaatgtcaaaaaccgcaattacttc 69
Query: 74 tgmaccaacctaata 88
| ||||||||||||
Sbjct: 70 agcaccaacctaata 84
>RF01061;mir-548;AADC01015752.1/126987-127070 9606:Homo sapiens
(human)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 61/75 (81%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccata-aaagtcatggcaaaaaccacaattamtta 73
|||||||| ||||||| | ||||||||| ||||| |||||||||||| || ||| |
Sbjct: 10 ggtgcaaatgtaattgcggtttttgccattgaaagtaatggcaaaaaccgcatttacgtt 69
Query: 74 tgmaccaacctaata 88
|| || |||||||||
Sbjct: 70 tgcactaacctaata 84
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 43.3 bits (21), Expect = 5e-04
Identities = 32/37 (86%)
Strand = Plus / Minus
Query: 52 tggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||| |||||| || || |||||||||||
Sbjct: 37 tggcaaaaaccgcaattacttttgcgccaacctaata 1
>RF01061;mir-548;CABD01524054.2/315-398 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 32/37 (86%)
Strand = Plus / Plus
Query: 52 tggcaaaaaccacaattamttatgmaccaacctaata 88
||||||||||| ||||| || || ||||||||||||
Sbjct: 48 tggcaaaaaccgcaatttcttttgcaccaacctaata 84
>RF01061;mir-548;CABD01155376.1/1695-1778 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 43.3 bits (21), Expect = 5e-04
Identities = 61/75 (81%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 ggtgcaaaartaattgcaggttttgccat-aaaagtcatggcaaaaaccacaattamtta 73
|||||||| ||||||||| || ||||| |||||| ||| ||||||| || ||| ||
Sbjct: 10 ggtgcaaaggtaattgcagtcttcgccattaaaagtaatgccaaaaactgcagttacttt 69
Query: 74 tgmaccaacctaata 88
|| ||||||||||||
Sbjct: 70 tgcaccaacctaata 84
