miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 180 bits (91), Expect = 4e-45
Identities = 139/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||| ||| ||||||||||||||||||| || |||| | ||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 65 aatgaatctggacgtatt--tatctagattcattaacaactatgtgaatatggaaaatgc 122
||||||||||||| ||| |||||||||||||||||| | || ||||| ||| ||||||
Sbjct: 97 aatgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 123 tagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtac 4
Score = 129 bits (65), Expect = 1e-29
Identities = 131/152 (86%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| | | | || | || ||||||||||||| | || | || ||| |||||||
Sbjct: 65 atgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgct 124
Query: 124 agaatgacttacattgtgaaacggagggagta 155
||||||||||| ||||||||||||||| ||||
Sbjct: 125 agaatgacttatattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 178 bits (90), Expect = 2e-44
Identities = 135/150 (90%), Gaps = 5/150 (3%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| ||| | |||||||||||||||| | || ||||| ||| |||||||||
Sbjct: 65 atgaatctagacat-----tctagattcattaacatcaatatgaatgtgggaaatgctag 119
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||
Sbjct: 120 aatgacttacattgtgaaacggagggagta 149
Score = 155 bits (78), Expect = 2e-37
Identities = 132/150 (88%), Gaps = 5/150 (3%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || | |||||||||||||||| | || ||||| ||| |||||||||
Sbjct: 89 atgaatctaga-----atgtctagattcattaacatcaatatgaatgtgggaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 139/155 (89%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 66 atgaatctggacgtatttatct----agattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || ||| | ||||||||||||| | || |||||||||||||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtac 4
Score = 153 bits (77), Expect = 9e-37
Identities = 135/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| ||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 66 atgaatctggacgtat----ttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| ||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 2e-43
Identities = 140/157 (89%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||
Sbjct: 160 tatactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgt 101
Query: 64 taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
|||||||||| ||| ||| |||||||||||||||||| | || || || |||||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaa 41
Query: 120 tgctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||| |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 153 bits (77), Expect = 9e-37
Identities = 135/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||| |||||| ||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || ||| ||||||||||||||||| || ||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 165 bits (83), Expect = 2e-40
Identities = 138/154 (89%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatct-ggacgt--atttatctagattcattaacaactatgtgaatatggaaaatgc 122
|||||||| | || | || | | |||||||||||||| | || ||||| ||| ||||||
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 123 tagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagtac 158
Score = 165 bits (83), Expect = 2e-40
Identities = 136/153 (88%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 66 atgaatctggacgtatttat---ctagattcattaacaactatgtgaatatggaaaatgc 122
|||||||| || ||| ||| ||||||||||||||| | || ||||| ||| ||||||
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 137/155 (88%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| |||| ||| |||||||||||||| |||| || ||||||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||| | ||||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtac 159
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||||||| ||| || ||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 66 atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| | ||| | |||||||||||||||||||| ||||| ||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 131/147 (89%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 13 tccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatc 72
|||||| || ||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 73 tggacgtattta----tctagattcattaacaactatgtgaatatggaaaatgctagaat 128
| || ||| || |||||||||||||||| |||| ||||| ||||||||||||||||
Sbjct: 72 tagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 153 bits (77), Expect = 9e-37
Identities = 135/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||||||||||||||||| |||| ||||| ||| |||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ttagaatgacttacattatggaacggaaggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 163 bits (82), Expect = 9e-40
Identities = 136/153 (88%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||
Sbjct: 2 ttatacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatg 61
Query: 63 ttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgc 122
| ||||||||| ||| || | |||||||||||| ||| | || ||||| ||| ||||||
Sbjct: 62 tcaatgaatctagac--atctgtctagattcattgacatcaatatgaatgtgggaaatgc 119
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||| ||||||||||||||||
Sbjct: 120 tagaatgacttacattatgaaacggagggagta 152
Score = 133 bits (67), Expect = 8e-31
Identities = 130/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||||||||||||||||||||| | ||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| ||| | | |||||||||||| ||| | || ||||| ||| ||||| |||
Sbjct: 92 atgaatctagac--agatgtctagattcattgacatcaatatgaatgtgggaaatgatag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 161 bits (81), Expect = 4e-39
Identities = 138/156 (88%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 66 atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
||||||| ||| ||| ||| |||||||||||||| |||| ||||| || ||||||||
Sbjct: 65 atgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 124 agaatgacttacattgtgaaacggagggagtacgtt 159
| |||||||| |||| ||||||||||||||||||||
Sbjct: 125 aaaatgacttgcattatgaaacggagggagtacgtt 160
Score = 113 bits (57), Expect = 7e-25
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| |||| || ||||| |||||||| ||||||||||||| |||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 66 atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| | ||| ||| || |||||||||||| ||| ||||| ||| |||||||
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 124 agaatgacttacattgtgaaacggagggagta 155
| ||||||||||||||||||||||||| ||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 136/154 (88%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||||||||||||||||| ||||||||||||| |||||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| | | ||| ||| ||||||||||||||| | || ||||| |||||||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 136/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| ||| |||||||||||| || |||| ||||| |||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||||||| |||||||||||||||||| |||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 136/154 (88%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||| | ||| ||| |||||||||||||||||| | || ||||| ||| |||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| | || ||| | |||| ||||||||||| | || ||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 136/154 (88%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 66 atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||| |||||||||||| | | || ||||| |||||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||| ||||| |||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 66 atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | |||||||||||||||| | | ||||| ||| |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 159 bits (80), Expect = 1e-38
Identities = 134/153 (87%), Gaps = 8/153 (5%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||
Sbjct: 149 ttatacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatg 90
Query: 63 ttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgc 122
|||||| |||| ||||||||| |||||||| | || ||||| ||||||||||
Sbjct: 89 ttaatgtatcta--------tatctagatacattaacatcaatatgaatgtggaaaatgc 38
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 128/152 (84%), Gaps = 8/152 (5%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 64 taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
||||| |||| | || ||||| |||||||| | || ||||| ||| |||||||
Sbjct: 63 taatgtatctag--------atatagatacattaacatcaatatgaatgtgggaaatgct 114
Query: 124 agaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||| |||||||| ||||
Sbjct: 115 agaatgacttacattgtggaacggaggaagta 146
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 159 bits (80), Expect = 1e-38
Identities = 137/155 (88%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
||||||||||||||| |||||||||| |||||||||||||| | |||||||||| | |||
Sbjct: 3 tatacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgt 62
Query: 64 taatgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| | ||| ||| ||| ||||||||||||||| | || ||||| ||| |||||
Sbjct: 63 taatgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||||||||||||||||| ||||||||||||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagtac 157
Score = 153 bits (77), Expect = 9e-37
Identities = 134/152 (88%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||||||| |||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 66 atgaatctggacgtattta--tctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| ||| ||| || |||| ||||||||||| | || ||||| | |||||||||
Sbjct: 96 atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37
Query: 124 agaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||| |||||||| ||||
Sbjct: 36 agaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 157 bits (79), Expect = 6e-38
Identities = 133/150 (88%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || ||| | ||||||||||||| || | || ||||| | | |||||||||
Sbjct: 65 atgaatctaga--tatatgtctagattcattagcatcaatatgaatgtaggaaatgctag 122
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||| ||||||||||||||||||||
Sbjct: 123 aatgacttatattgtgaaacggagggagta 152
Score = 151 bits (76), Expect = 3e-36
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| |||||||||||||||| |||||||||| | || ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| ||| ||| |||||||||||||| || | || ||||| ||| |||||||||
Sbjct: 92 atgaatctagacatat--atctagattcattagcatcaatatgaatgtgggaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||| |||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 136/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 66 atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||| |||||||||||||| | || ||||||||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||| |||| |||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| |||| ||| | |||||||||||||||| || ||||| || |||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 151 bits (76), Expect = 3e-36
Identities = 140/159 (88%), Gaps = 8/159 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 66 atgaatctggac----gtatttatctagattcattaaca--actatg--tgaatatggaa 117
|||||||| ||| ||| |||||||||||||||||| |||||| |||||||| |
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||| |||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 125 bits (63), Expect = 2e-28
Identities = 136/158 (86%), Gaps = 8/158 (5%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcata--tagt--t 61
|||||||||||||||||||||||| ||||||||||||||| || ||||||| |||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 62 gttaatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaa 117
|||||||||||| || || ||| ||||||||||||||| | | ||||| ||| |
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 136/156 (87%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||
Sbjct: 159 atacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtt 100
Query: 65 aatgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaat 120
|||||||| | || ||| | |||||||||||||| | | || ||||| ||| ||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
| ||||||||||||||||||||||||||||||||||
Sbjct: 39 gatagaatgacttacattgtgaaacggagggagtac 4
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||| |||||||||||||||||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| ||||||||||||||||| | ||| ||||| || |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 135/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| || |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100
Query: 65 aatgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaat 120
||||||| | || ||| ||| ||||||||||| || |||| ||||||| ||||||
Sbjct: 99 aatgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
| |||||||||||||||||||||||||||||||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 133/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| |||||||| ||||| | | |||||||||| || |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63
Query: 65 aatgaatctggacgtatttatct----agattcattaacaactatgtgaatatggaaaat 120
||||||||| ||| || ||| | | |||||||| || |||| ||||| ||||||||
Sbjct: 64 aatgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaat 123
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 147 bits (74), Expect = 5e-35
Identities = 131/151 (86%), Gaps = 8/151 (5%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| | ||||
Sbjct: 4 atacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 63
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||||||||| | || |||||||||||| | | || | ||||||||||||||||
Sbjct: 64 aatgaatctag--------atgtagattcattaatatcaatataaatatggaaaatgcta 115
Query: 125 gaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||
Sbjct: 116 gaatgacttacattgtgaaacggagggagta 146
Score = 109 bits (55), Expect = 1e-23
Identities = 123/145 (84%), Gaps = 8/145 (5%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||||||| |||||||||||||| ||| ||| |||| | | |
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatat 89
Query: 64 taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||||| || ||||||||||||||||| | || ||||| || |||||||
Sbjct: 88 taatgaatct--ac------atctagattcattaacatcaatatgaatgtgagaaatgct 37
Query: 124 agaatgacttacattgtgaaacgga 148
|||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 129/147 (87%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 13 tccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatc 72
||||||||| ||||||| |||||| | |||||||||||||||||| | || |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 73 tggac----gtatttatctagattcattaacaactatgtgaatatggaaaatgctagaat 128
| ||| ||| |||||||||||||||||||| || ||||| ||| ||||||||||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 129 gacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 133/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 65 aatgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaat 120
|||||||| | || ||| | ||||||||||||| || | || ||||| ||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaat 123
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
| | |||||||||||||| ||||||||| ||||||
Sbjct: 124 ggtggaatgacttacattatgaaacggaaggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 135/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||||||||||| |||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 66 atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||| |||||||||||| | | || ||||| || ||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||| |||||| ||||||||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagtac 159
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||||||| |||||| ||| |||||||||||||| ||||||||||| | | |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 66 atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | |||||||||||||||| | || | ||| ||| |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 147 bits (74), Expect = 5e-35
Identities = 133/153 (86%), Gaps = 6/153 (3%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgt 62
Query: 64 taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||||| ||| || || ||||||||||| | || ||||| ||| |||||||
Sbjct: 63 taatgaatctagac------atatatattcattaacatcaatatgaatgtgggaaatgct 116
Query: 124 agaatgacttacattgtgaaacggagggagtac 156
|||||||||||||||||||||||| ||||||||
Sbjct: 117 agaatgacttacattgtgaaacggggggagtac 149
Score = 125 bits (63), Expect = 2e-28
Identities = 122/142 (85%), Gaps = 6/142 (4%)
Strand = Plus / Minus
Query: 14 ccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatct 73
|||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83
Query: 74 ggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
||| | |||||||||||||||| || | ||| ||| |||||||||||||||||
Sbjct: 82 ----atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgactt 27
Query: 134 acattgtgaaacggagggagta 155
||||||||||||||||| ||||
Sbjct: 26 acattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 145 bits (73), Expect = 2e-34
Identities = 129/149 (86%), Gaps = 9/149 (6%)
Strand = Plus / Plus
Query: 7 acttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaa 66
||||||||||||||| ||||||| ||||||||||||||| |||||| |||| | ||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 67 tgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctaga 126
| ||||| | |||||||||||||||| | || ||||||||||||||||||||
Sbjct: 66 taaatctag---------tctagattcattaacatcaatatgaatatggaaaatgctaga 116
Query: 127 atgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||
Sbjct: 117 atgacttacattgtgaaacggagggagta 145
Score = 97.6 bits (49), Expect = 4e-20
Identities = 120/145 (82%), Gaps = 9/145 (6%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| ||| |||||||| | |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || ||||||| ||||||| | || | ||| || |||||||||
Sbjct: 85 atgaatctaga---------ctagatttattaacatcaatataaatgtgagaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagg 150
||||||||||||| |||||||||||
Sbjct: 34 aatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| | |||||||||||||| |||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||||||||||||||| | | || ||||| ||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||| ||||||||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||| ||||||||||| ||||||||||||||||||||||||||| | | |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| | || ||| | |||||||||||||||| | || | ||| ||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
| | ||||||||||||||||||||||||| |||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 66 atgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||| | || || | | |||||||||||||||| |||| ||||||||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 127 bits (64), Expect = 5e-29
Identities = 134/157 (85%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||| ||||||| ||||||||||||| |||| |||||||||| ||
Sbjct: 161 ttatactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatg 102
Query: 63 ttaatgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaa 118
||||||||||| | || | | |||||| ||||||||||| |||| || || ||| |
Sbjct: 101 ttaatgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggca 42
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||| ||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| |||||| ||| ||| ||||| | || ||||| |||||||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||| ||||||||||||||||||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| ||||| |||||||| |||||||||||| | ||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63
Query: 65 aatgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaat 120
||| ||| | | | ||| | |||||||||||||||| | || ||||| ||| ||||
Sbjct: 64 aataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaat 123
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||| |||||||||||||||||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||||||||||||||| | | || ||||| || |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||| |||| ||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || ||| ||||||||||||| | | || ||||| ||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||| ||||| ||||| || |||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 66 atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| | || ||| ||||||||| |||| |||| ||||| ||| |||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 143 bits (72), Expect = 8e-34
Identities = 136/157 (86%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 65 aatgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaat 120
|||||||| | ||| || |||||||||||||||| |||| ||||| || ||||
Sbjct: 99 gatgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagtacg 157
| || ||||||||||| ||||||||||||||||||||
Sbjct: 39 gataaaatgacttacaatgtgaaacggagggagtacg 3
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| | || ||| | |||||||||||||||| || ||||| |||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 131 bits (66), Expect = 3e-30
Identities = 133/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||||||||||||||||| || ||||| ||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||| ||||||||||||||||||||||||| |||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 143 bits (72), Expect = 8e-34
Identities = 134/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
|||||||||||||||| |||||||| ||||||||||||||| ||||||||||| | || |
Sbjct: 4 atacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggt 63
Query: 65 aatgaatctgga---cgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||||| || ||| |||||||||||||||||| || | ||||||| |||||
Sbjct: 64 aatgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 109 bits (55), Expect = 1e-23
Identities = 129/153 (84%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||| ||||||||| ||| |||| |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 66 atgaatctggacgtattt---atctagattcattaacaactatgtgaatatggaaaatgc 122
|||||||| || ||| | |||||||||||||| || | || ||||| || ||||||
Sbjct: 97 atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| |||||||||| ||||
Sbjct: 37 tagaatgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 141 bits (71), Expect = 3e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||||
Sbjct: 4 atacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtt 63
Query: 65 aatgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgc 122
||||||| | ||| ||| ||| ||||||||||||||| | ||||| || |||||||
Sbjct: 64 aatgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgc 123
Query: 123 tagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||
Sbjct: 124 tagaatgacttacattgtgaaacggagggagtac 157
Score = 97.6 bits (49), Expect = 4e-20
Identities = 127/152 (83%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 66 atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| || ||| ||| ||| ||||||||||| | ||||| ||| ||||||
Sbjct: 96 atgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcc 37
Query: 124 agaatgacttacattgtgaaacggagggagta 155
||||||||||| ||||||||||||||| ||||
Sbjct: 36 agaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/155 (86%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||||||| |||||||||||||| |||||||| ||| | ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 65 aatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaat 120
||||| ||| || || ||| |||||||||||| || | || ||||||| ||||||
Sbjct: 64 aatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaat 123
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||| ||||||||||||||||||||
Sbjct: 124 gctagaatgacttatattgtgaaacggagggagta 158
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| |||||||||||||| | | |||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||||||| ||||||||| | || |||| |||||||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 139 bits (70), Expect = 1e-32
Identities = 130/151 (86%), Gaps = 8/151 (5%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| | ||||
Sbjct: 4 atacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 63
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||||||||| | || |||||||||||| | | || | ||||||||||||||||
Sbjct: 64 aatgaatctag--------atgtagattcattaatatcaatataaatatggaaaatgcta 115
Query: 125 gaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||
Sbjct: 116 taatgacttacattgtgaaacggagggagta 146
Score = 101 bits (51), Expect = 3e-21
Identities = 122/145 (84%), Gaps = 8/145 (5%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||||||| ||||| |||||||| ||| ||| |||| | | |
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatat 89
Query: 64 taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||||| || ||||||||||||||||| | || ||||| || |||||||
Sbjct: 88 taatgaatct--ac------atctagattcattaacatcaatatgaatgtgagaaatgct 37
Query: 124 agaatgacttacattgtgaaacgga 148
|||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/155 (86%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| |||||||||||| | || ||||||||| | ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtt 100
Query: 65 aatgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaat 120
||||||| | ||| | || |||||||||||||||||| | || ||||||| | ||||
Sbjct: 99 aatgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||||| | |||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 66 atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || || |||| ||||||||||| | || ||||| |||| |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| ||||||||||| | | ||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 66 atgaatctggacgtattt----atctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | ||||||||||||||||| |||| ||||||| | ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||||||| || | |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 66 atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || | || |||||||||||||||||| | || ||||| || | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 137 bits (69), Expect = 5e-32
Identities = 129/152 (84%), Gaps = 14/152 (9%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||| ||||||| |||||||||||||||||| |||||||| | ||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||||||||| ||||||||||||| | || ||||||||| ||||||||
Sbjct: 81 aatgaatct--------------agattcattaacatcaatatgaatatgggaaatgcta 36
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagggagtac 4
Score = 117 bits (59), Expect = 5e-26
Identities = 125/150 (83%), Gaps = 14/150 (9%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||||||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||| ||||||||||||||||| | || ||||||||| |||||||||
Sbjct: 65 atga--------------atctagattcattaacatcaatatgaatatgggaaatgctag 110
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||| ||||
Sbjct: 111 aatgacttacattatgaaacggaggaagta 140
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| || |||||| ||| ||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 66 atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| || |||||||||||||||| |||| |||||||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | |||||||||| | || |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| || ||| ||||||||||||||| |||| ||||| ||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| |||||||||| ||||||||||| ||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 135/157 (85%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 2 ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttata 61
Query: 63 ttaatgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaa 118
||||||||||| |||| ||| | ||||||||||||| || | || || || || ||
Sbjct: 62 ttaatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaa 121
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
|||||| ||||||||||||||||||||||||||||||
Sbjct: 122 atgctaaaatgacttacattgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||| ||||||||| ||||| ||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 66 atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||| |||||||||||| | | ||||| ||| |||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 129/149 (86%), Gaps = 4/149 (2%)
Strand = Plus / Minus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
||||||||||| ||||||| ||||||||||||||||||||||||||| | |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 71 tctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatgctaga 126
||| ||| ||| |||| |||||||| |||| |||| ||||||| | ||||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 127 atgacttacattgtgaaacggagggagta 155
|||||||||||| ||||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 128/153 (83%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| |||||||||||||||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 66 atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| || ||| | |||||||||| |||| | || ||||| ||| |||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagt 154
||||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||| ||||||||||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||| |||||| ||||||| | || | ||| || |||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 122
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 123 bits (62), Expect = 8e-28
Identities = 132/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||| ||||| |||| | |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 66 atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|| ||||| || ||| | |||||||||||||||| | || ||||||||| |||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|| |||||||||||||||||||||||||||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||| ||||||||||| |||||||| | |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 66 atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||| |||||| ||||||| | || | ||| || |||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 123 bits (62), Expect = 8e-28
Identities = 132/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||| ||||| |||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 66 atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|| ||||| || ||| | |||||||||||||||| | || ||||||||| |||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|| |||||||||||||||||||||||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 9 ttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatg 68
||||||||||||| ||| ||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 69 aatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgctaga 126
||||||||| ||| | | |||||||||||| | |||| |||| ||| ||| |||||
Sbjct: 68 aatctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 127 atgacttacattgtgaaacggagggagta 155
|||||||| ||||||||||||||||||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156
Score = 103 bits (52), Expect = 7e-22
Identities = 124/147 (84%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| ||||||||| ||| ||||||||| ||||| | ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 66 atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| | || ||| | || ||||||||||||| |||| ||||| ||| ||||||
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 124 agaatgacttacattgtgaaacggagg 150
||||||||||| ||| |||||||||||
Sbjct: 36 agaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 129 bits (65), Expect = 1e-29
Identities = 129/152 (84%), Gaps = 15/152 (9%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||| ||||||| |||||||||||||||||| |||||| |||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtt 57
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||||||||| | |||||||||||||||| | || ||||||||| ||||||||
Sbjct: 58 aatgaatcttg---------tctagattcattaacatcaatatgaatatgggaaatgcta 108
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||
Sbjct: 109 gaatgacttacattgtgaaacggagggagtac 140
Score = 109 bits (55), Expect = 1e-23
Identities = 125/150 (83%), Gaps = 15/150 (10%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||||||| |||||||| | |||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || | ||||||||||||| ||||||||| |||||||||
Sbjct: 79 atgaatctaga---------caagattcattaaca------tgaatatgggaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||| ||||
Sbjct: 34 aatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| ||||||||||||||||||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 66 atgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| | | |||||||||||||||||||||| || ||||| ||||||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||||||||| ||||||||||||||| ||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagta 5
Score = 123 bits (62), Expect = 8e-28
Identities = 132/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| |||||||| | ||| |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 66 atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| |||||||||||||||| | | || ||||| ||| |||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||| |||||||||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtac 159
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 128/150 (85%), Gaps = 8/150 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||| |||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||| || ||| || |||||||||||| | || ||||| |||||||||||||
Sbjct: 86 atgaaactagacata--------gattcattaacatcaatatgaatgtggaaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||| ||||
Sbjct: 34 aatgacttacattatgaaacggaggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 128/150 (85%), Gaps = 8/150 (5%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||||| | | ||||| |||||||||| | || ||||| ||| |||||||||
Sbjct: 65 atgaatc--------tatgtctagtttcattaacatcaatatgaatgtgggaaatgctag 116
Query: 126 aatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||| |||||||||
Sbjct: 117 aatgacttacattgtgaaaccgagggagta 146
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 129 bits (65), Expect = 1e-29
Identities = 129/152 (84%), Gaps = 15/152 (9%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||| ||||||| |||||||||||||||||| |||||| |||
Sbjct: 140 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtt 87
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||||||||| | |||||||||||||||| | || ||||||||| ||||||||
Sbjct: 86 aatgaatcttg---------tctagattcattaacatcaatatgaatatgggaaatgcta 36
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagggagtac 4
Score = 109 bits (55), Expect = 1e-23
Identities = 125/150 (83%), Gaps = 15/150 (10%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||||||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || | ||||||||||||| ||||||||| |||||||||
Sbjct: 65 atgaatctaga---------caagattcattaaca------tgaatatgggaaatgctag 109
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||| ||||
Sbjct: 110 aatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| ||||||||||| | | ||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | | ||||||||||||||| |||| ||||||| | ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||||||| || | |||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 66 atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| | || |||||||||||||||||| | || ||||| || | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| | || ||| | |||||||||||||||| | || ||||| ||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||| ||||||||||||||||||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||||||||||||||||| || ||||| ||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||| ||||||||| ||||||||||||||| ||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 133/156 (85%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||| ||||||| |||||||||||||| |||||||||||| | ||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgc 62
Query: 64 taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
||||||||| ||| ||||||||||||||||||| || | || || || || ||||
Sbjct: 63 caatgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaa 122
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
| ||||||||||||||||| ||||||||||||||||
Sbjct: 123 tactagaatgacttacattatgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||| |||| ||||| ||||| | || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || ||| ||||||||||| || | || ||||| |||||||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 123 bits (62), Expect = 8e-28
Identities = 128/151 (84%), Gaps = 13/151 (8%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||||| ||| |||||||||||| | || ||||| || |||||||||
Sbjct: 65 atgaatc-------att------gattcattaacatcaatatgaatgtgagaaatgctag 111
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||| |||||||||||||||||||||||||
Sbjct: 112 aatgaattacattgtgaaacggagggagtac 142
Score = 113 bits (57), Expect = 7e-25
Identities = 126/150 (84%), Gaps = 13/150 (8%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||||| || |||||||||||| | || ||||| ||| |||||||||
Sbjct: 81 atgaatc------aat-------gattcattaacatcaatatgaatgtgggaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 123 bits (62), Expect = 8e-28
Identities = 131/154 (85%), Gaps = 10/154 (6%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||| ||| |||||||| | |||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||| ||| |||| |||||| | ||||||||| | || ||||| |||||||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||| | | || || || | | || ||| | || |||||||||||||||||||
Sbjct: 65 atgagtttagatagatacatatgtctagat--acatcaatatgaatatggaaaatgctag 122
Query: 126 aatgacttacattgtgaaacggagggagtacgtt 159
||||||||||||||||||||||||| ||||||||
Sbjct: 123 aatgacttacattgtgaaacggaggaagtacgtt 156
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 132/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| |||||||| ||||||||||||||||| | | ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 65 aatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaat 120
||||||||| ||| ||| |||||||||||||||||| | || | || ||||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 39 actagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||| | | || ||||| ||| |||| |||||||| ||||||||||||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaa 147
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 132/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| ||||||||||||| ||||||| |||||| |||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 66 atgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||| | || || | | |||||||||||||||| |||| ||||| | | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtac 4
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||||||| || |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 66 atgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| | || | | |||||| ||||||||||| |||| | || ||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 126/147 (85%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 13 tccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatc 72
||||||||||||||||| |||||||| |||||| ||||||||||| | ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 73 tggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatgctagaat 128
| || || ||| ||||||||||||| | | | ||||| | ||||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 129 gacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 117 bits (59), Expect = 5e-26
Identities = 132/156 (84%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| |||||||||||||| | | |||||| | | | ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 65 aatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaat 120
||||||||| ||| ||| |||||||||||||||||| | || ||||| || ||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
| |||||||||||||||||||||||||| |||||||
Sbjct: 39 ggtagaatgacttacattgtgaaacggaaggagtac 4
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 123 bits (62), Expect = 8e-28
Identities = 131/154 (85%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||| ||| |||| |||||| | ||||||||| | || ||||| ||||||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagta 152
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 53 tgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||| ||| |||||||||||| | |||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 66 atga 69
||||
Sbjct: 92 atga 89
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| | || ||| | ||||||||||||| || | || | ||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||| ||||||||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| ||||| ||| |||||||||||| |||| | || ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 66 atgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| | | ||| ||||||||||||||||| | || ||||| ||| |||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 66 atgaatctggacgtattt----atctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | ||||||||||||||||| |||| || |||||| || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 130/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| |||||||||| || |||| || ||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 66 atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || | || | | ||||||||||| || |||| ||||| ||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||| ||||||||||||| |||||||||||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagtac 159
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 125/145 (86%), Gaps = 11/145 (7%)
Strand = Plus / Plus
Query: 12 ctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaat 71
|||||||||||||||||| |||||||| |||||||||||||||||| | |||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 72 ctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgac 131
|| || |||||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 71 ctaaac----atatctagattcattaaca------tcaatat-gaaaatgctagaatgac 119
Query: 132 ttacattgtgaaacggagggagtac 156
|||||||||||||||||| ||||||
Sbjct: 120 ttacattgtgaaacggagagagtac 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 119/144 (82%), Gaps = 11/144 (7%)
Strand = Plus / Minus
Query: 12 ctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaat 71
|||||||||||||||||| |||||||||||||| |||||| | |||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgttaatgaat 85
Query: 72 ctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgac 131
|| || | |||| |||||||||||| | || ||||| ||| ||||| |||||||||
Sbjct: 84 ctagatatgttta----gattcattaacatcaatatgaatgtgggaaatgttagaatgac 29
Query: 132 ttacattgtgaaacggagggagta 155
|||||||||||||||||| |||||
Sbjct: 28 ttacattgtgaaacggagagagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | | |||||||| | ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 66 atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| |||||||||||||||||| |||||||||| ||| ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|| || | |||||||||||||||||||||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | || || |||| |||||||||| |||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | | ||||||||||||||| |||| ||||| || ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||| | | |||||||||||||||||||||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||||||||||||| ||||||||||| | | ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || ||| |||||||||||| || | || ||||| ||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||| ||||| |||||||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| ||||||||||||||| | | || ||||| || |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||| ||||||||||||||| |||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 119 bits (60), Expect = 1e-26
Identities = 129/153 (84%), Gaps = 8/153 (5%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||| || |||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || |||||||||||||||| | || ||||||| | |||||||||
Sbjct: 65 atgaatctaga--------tctagattcattaacatcaatatgaatatagtaaatgctag 116
Query: 126 aatgacttacattgtgaaacggagggagtacgt 158
||||||||| |||||| |||||||| |||||||
Sbjct: 117 aatgacttatattgtggaacggaggaagtacgt 149
Score = 105 bits (53), Expect = 2e-22
Identities = 125/150 (83%), Gaps = 8/150 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||||||| |||||| ||| |||||||||||||| | | |||||||| | |||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || |||||||||||||||| | || ||||| ||| ||||| ||
Sbjct: 86 atgaatctaga--------tctagattcattaacatcaatatgaatgtgggaaatggtaa 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 119 bits (60), Expect = 1e-26
Identities = 127/151 (84%), Gaps = 10/151 (6%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| ||||| ||| | |||||| |||| | || ||||| ||| |||||||||
Sbjct: 84 ataaatctagac----------aaattcatgaacatcaatatgaatgtgggaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagtac 156
|||| ||||||||||||||||||||||||||
Sbjct: 34 aatggcttacattgtgaaacggagggagtac 4
Score = 109 bits (55), Expect = 1e-23
Identities = 125/150 (83%), Gaps = 10/150 (6%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||| |||| |||||||| || |||| | || ||||| ||| |||||||||
Sbjct: 65 atga----------atttgtctagatttatgaacatcaatatgaatgtgggaaatgctag 114
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||| ||||
Sbjct: 115 aatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 119 bits (60), Expect = 1e-26
Identities = 129/153 (84%), Gaps = 8/153 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||| || |||||||||||||||||| | |||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || |||||||||||||||| | || ||||||| | |||||||||
Sbjct: 86 atgaatctaga--------tctagattcattaacatcaatatgaatatagtaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagtacgt 158
||||||||| |||||| |||||||| |||||||
Sbjct: 34 aatgacttatattgtggaacggaggaagtacgt 2
Score = 105 bits (53), Expect = 2e-22
Identities = 125/150 (83%), Gaps = 8/150 (5%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||||||| |||||| ||| |||||||||||||| | | |||||||| | |||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || |||||||||||||||| | || ||||| ||| ||||| ||
Sbjct: 65 atgaatctaga--------tctagattcattaacatcaatatgaatgtgggaaatggtaa 116
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||||||||
Sbjct: 117 aatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 117 bits (59), Expect = 5e-26
Identities = 127/151 (84%), Gaps = 14/151 (9%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| || ||| ||||||||||||| | || ||||| |||||||||||||
Sbjct: 65 at------------atgtat--agattcattaacatcaatatgaatgtggaaaatgctag 110
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||||||| |||||||||||||||||||||
Sbjct: 111 aatgacttatattgtgaaacggagggagtac 141
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| |||||||||||||| |||||||||||| | |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 66 atgaatct 73
||||||||
Sbjct: 80 atgaatct 73
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 117 bits (59), Expect = 5e-26
Identities = 128/150 (85%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||||||||| |||||| | || | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||| | || ||| | ||||||||||||| || | || | ||| ||||||||||||
Sbjct: 65 atgaatttaga--tatatctctagattcattagcatcaatataaatgtggaaaatgctaa 122
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||| ||||||||||||||||||||
Sbjct: 123 aatgacttatattgtgaaacggagggagta 152
Score = 105 bits (53), Expect = 2e-22
Identities = 128/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||| ||| ||||| |||||||| ||||||| |||| | || |
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||||||||| || ||| ||||| |||||||| || | |||| ||| || ||||||||
Sbjct: 93 aatgaatctagagatat--atctaaattcattagcatcaatgtaaatgtgagaaatgcta 36
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||| |||||
Sbjct: 35 aaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 117 bits (59), Expect = 5e-26
Identities = 127/152 (83%), Gaps = 12/152 (7%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||||||| |||||||||||||||||| |||||||| | |||
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtc 84
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
|||| || ||||||||||||||| | | || ||||| || ||||||||
Sbjct: 83 aatggat------------atctagattcattaatatcaatatgaatgtgagaaatgcta 36
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagggagtac 4
Score = 103 bits (52), Expect = 7e-22
Identities = 125/150 (83%), Gaps = 12/150 (8%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||| ||||||||||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| || |||| |||| ||| | || ||||||||| |||||||||
Sbjct: 65 atgaatctaga------tatc------cattgacatcaatatgaatatgggaaatgctag 112
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||| ||||
Sbjct: 113 aatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 130/153 (84%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| | |||||||||| ||||||||||||| |||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 66 atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| | ||| || || ||||||||||||||| | || ||||||| | ||||||
Sbjct: 96 atgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgct 37
Query: 124 agaatgacttacattgtgaaacggagggagtac 156
|||| | |||||||| |||||||||||||||||
Sbjct: 36 agaaagtcttacattatgaaacggagggagtac 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/152 (82%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | |||||||||| || | |||||||| | |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 66 atgaatctggacgtatt--tatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| | ||| | |||||||||||||||| ||| ||||| |||| ||||||
Sbjct: 65 atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124
Query: 124 agaatgacttacattgtgaaacggagggagta 155
|||| | |||||||| ||||||||||| ||||
Sbjct: 125 agaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||| ||| ||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 66 atgaatctggacgtat----ttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| | |||| ||||||||||| |||| ||||||||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||| | ||||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtac 4
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||| | | |||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 66 atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||| | ||| ||| | |||||||||||||||| |||| ||||| ||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 134/159 (84%), Gaps = 4/159 (2%)
Strand = Plus / Minus
Query: 2 cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagtt 61
|||||||||||||||||||| ||||||| | |||||||||| ||||||||||||||| |
Sbjct: 162 cttatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagat 103
Query: 62 gttaatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaa 117
|||||||||||| || || | | |||||||||||||||| |||| ||||| ||
Sbjct: 102 gttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagg 43
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
||||||| || | |||||||| |||||||||||||||||
Sbjct: 42 aatgctaaaaagtcttacattatgaaacggagggagtac 4
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | || ||||||| | ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 66 atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| | |||||||||||||||| |||| ||||| ||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 134/159 (84%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 2 cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagtt 61
|||||||||||||||||||| ||||||| | |||||||||| ||||||||||||||| |
Sbjct: 1 cttatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagat 60
Query: 62 gttaatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaa 117
|||||||||||| || || | | |||||||||||||||| |||| ||||| ||
Sbjct: 61 gttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagc 120
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
||||||| || | |||||||| |||||||||||||||||
Sbjct: 121 aatgctaaaaagtcttacattatgaaacggagggagtac 159
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | || ||||||| | ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 66 atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| | |||||||||||||||| |||| ||||| ||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||||||||||||||| | || ||||||| ||||||||||||||||||||||||||||
Sbjct: 77 tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18
Query: 143 aacggagggagtac 156
||||||||||||||
Sbjct: 17 aacggagggagtac 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| | | |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
|||||||||||| ||||||||||||||| ||||
Sbjct: 106 tagaatgacttatattgtgaaacggaggaagta 138
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 133/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||||||||||| | || ||| ||| |||||||||||||| ||
Sbjct: 161 ttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatg 102
Query: 63 ttaatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaa 118
||||||||||| ||| |||| ||||||| |||||||||| |||| ||||||||| |
Sbjct: 101 ttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca 42
Query: 119 atgctagaatgacttacattgtgaaacggagggagtac 156
|| |||||| | |||| ||| |||||||||||||||||
Sbjct: 41 atactagaaagtcttatattatgaaacggagggagtac 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||| ||| | |||||| ||| |||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
||||| || || ||| || ||||||||||||||| |||| ||||| |||| |||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||| || | |||||||||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 113 bits (57), Expect = 7e-25
Identities = 128/150 (85%), Gaps = 5/150 (3%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||| |||||||||||||| ||||||||||||||| ||||||||||| | |||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||| || | || | |||||||||||||| | || ||||| |||||||||||||
Sbjct: 89 atgaaact--atgtc---acatagattcattaacatcaatatgaatgtggaaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||| ||||
Sbjct: 34 aatgacttacattatgaaacggaggaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 128/150 (85%), Gaps = 5/150 (3%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| | | | | ||| |||||||||| | || ||||| || |||||||||
Sbjct: 65 atgaatct--atg---tgacatagtttcattaacatcaatatgaatgtgagaaatgctag 119
Query: 126 aatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||| |||||||||
Sbjct: 120 aatgacttacattgtgaaaccgagggagta 149
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 113 bits (57), Expect = 7e-25
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| || |||||||||| ||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| | || || | |||||||||||||||| ||| ||||||| ||||||
Sbjct: 65 atgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 124 agaatgacttacattgtgaaacggagggagta 155
| || | |||||||| ||||||||||||||||
Sbjct: 125 acaaagtcttacattatgaaacggagggagta 156
Score = 97.6 bits (49), Expect = 4e-20
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||| ||||||| | || ||||||| | | |||||| ||| ||
Sbjct: 159 ttatactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatg 100
Query: 63 ttaatgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaat 120
||||||||||| ||| ||| | | ||||||||||||||| |||| ||||| ||| |||
Sbjct: 99 ttaatgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
||||||| |||||||||| ||||||||||| |||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 126/150 (84%), Gaps = 8/150 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| | |||||||||| | || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||| | || ||||||||||||| || | || | |||||| ||||| ||||
Sbjct: 86 atgaatttaga--------tctagattcattagcatcaatataaatatgaaaaatactag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/152 (82%), Gaps = 8/152 (5%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||||||| ||||||||| |||| || ||| |||| | ||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgc 62
Query: 64 taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||||| || |||| |||||||| || | || ||||| | |||||||||
Sbjct: 63 taatgaatctaga--------tctaaattcattagcatcaatatgaatgtagaaaatgct 114
Query: 124 agaatgacttacattgtgaaacggagggagta 155
||||||| ||||||||||||||||||||||||
Sbjct: 115 agaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 133/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||||||||||| | || ||| ||| |||||||||||||| ||
Sbjct: 2 ttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatg 61
Query: 63 ttaatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaa 118
||||||||||| ||| |||| ||||||| |||||||||| |||| ||||||||| |
Sbjct: 62 ttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca 121
Query: 119 atgctagaatgacttacattgtgaaacggagggagtac 156
|| |||||| | |||| ||| |||||||||||||||||
Sbjct: 122 atactagaaagtcttatattatgaaacggagggagtac 159
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||| ||| | |||||| ||| |||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
||||| || || ||| || ||||||||||||||| |||| ||||| |||| |||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||| || | |||||||||||||||||||||||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| | || ||| | ||||||||||||| || | || | ||| || ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||||| |||| ||||||||||||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 130/156 (83%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||| ||| ||||||||||||| |||||| |||| | ||
Sbjct: 160 tatactccctccgtttcacaatataagccattctagcatttttcacatttatattgatga 101
Query: 64 taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
|||||||||| ||| ||| |||||||||||||||||| || ||||| ||| |||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaa 41
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
||||| ||||||||| ||||||||||||||| ||||
Sbjct: 40 tgctacaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| | || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagtac 156
|||||| |||||
Sbjct: 15 cggaggaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 130 acttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 147 gagggagta 155
|||||||||
Sbjct: 13 gagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatag 71
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 102 ctatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||| ||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 111 bits (56), Expect = 3e-24
Identities = 127/150 (84%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||| |||||||||||| |||| | |||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||| || | || || ||| |||||||||| | || ||||| ||| |||| |||
Sbjct: 91 atgaaacttaa---atagatgtagtttcattaacatcaatatgaatgtgggaaataatag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||| ||||||||||||||||||||
Sbjct: 34 aatgacttatattgtgaaacggagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 129/153 (84%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| | ||
Sbjct: 2 ttatactccctccgtttcacaatataagtcattctattatttcccacattcatattgatg 61
Query: 63 ttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgc 122
|||||||| || | |||||| || |||||||||| | || | ||| ||| |||| |
Sbjct: 62 ttaatgaaactacatctattta---agtttcattaacatcaatataaatgtgggaaatac 118
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||| ||||
Sbjct: 119 tagaatgacttacattgtgaaacggaggaagta 151
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 132/157 (84%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| |||||||||||||| |||| ||||| | |||||||||||||| |||| | |||
Sbjct: 3 tatactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 64 taatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaa 119
| |||||||| ||| || | |||||||||||||||||| | || | ||| ||| |||
Sbjct: 63 ttatgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaa 122
Query: 120 tgctagaatgacttacattgtgaaacggagggagtac 156
||||| |||||||||| |||||||||||||| |||||
Sbjct: 123 tgctaaaatgacttactttgtgaaacggaggaagtac 159
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||||||||||||| |||| ||||| |||||||||||||||| |||| | |||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 66 atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| | || ||| | ||||||||||| |||| | || | ||| ||| |||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
| | |||||||||| |||||||||||||||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||
Sbjct: 2 ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 63 ttaatgaatct 73
| |||||||||
Sbjct: 62 tcaatgaatct 72
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||| ||| | || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatat 84
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 132/156 (84%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||||||| |||||||| |||| |||||||||||| | |||
Sbjct: 159 tatactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgt 100
Query: 64 taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
|||||||||| ||| ||| |||||||||||||||| | | || ||||| ||| |||
Sbjct: 99 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
||||||| ||||||||||| ||||||||||||||
Sbjct: 39 -actagaataacttacattgtaaaacggagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 131/155 (84%), Gaps = 5/155 (3%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||| ||||||||| | ||||||| |||||||||||||||| | | ||
Sbjct: 4 atactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatt 62
Query: 65 aatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaat 120
||||||||| || || ||| ||||||||||||||| | || ||||| ||||||||
Sbjct: 63 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaat 122
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||
Sbjct: 123 attagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
|||||||||||||||| |||| || |||||||| |||||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 96 aaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 109 bits (55), Expect = 1e-23
Identities = 127/151 (84%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||||||| | || |||| || ||||||||||| ||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||||||||| ||| ||| ||| |||||||||||||| || | || || ||| | |||||
Sbjct: 64 aatgaatctagacatatgtatttagattcattaacatctttatgtatgtgggtagtgcta 123
Query: 125 gaatgacttacattgtgaaacggagggagta 155
|| | |||| ||||||||||||||||||||
Sbjct: 124 aaaagtcttatattgtgaaacggagggagta 154
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/150 (80%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| | || ||||| | ||||||| |||| || |||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| | || | |||||||||||||||| ||| ||||| ||| || ||||
Sbjct: 94 atgaatctaaatacatatgtctagattcattaacatctaaatgaatgtgggcaacgctac 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
|| | |||||||||||||||||||| ||||
Sbjct: 34 aaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 126/151 (83%), Gaps = 14/151 (9%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| | ||| |||||||||||||| | || ||||| ||| |||||||||
Sbjct: 65 at--------atgta------tagattcattaacatcaatatgaatgtgggaaatgctag 110
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||||||| |||||||||||||||||||||
Sbjct: 111 aatgacttatattgtgaaacggagggagtac 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 66 atgaatct 73
||||||||
Sbjct: 80 atgaatct 73
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 107 bits (54), Expect = 5e-23
Identities = 125/150 (83%), Gaps = 9/150 (6%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| || |||||||||| ||||||| | || | |||||| |||||||||
Sbjct: 65 ---------gatagatctatctagatttattaacatcaatataaatatgagaaatgctag 115
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||
Sbjct: 116 aatgacttacattgtgaaacggagggagta 145
Score = 75.8 bits (38), Expect = 2e-13
Identities = 123/151 (81%), Gaps = 9/151 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||| || ||| |||| | |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| ||||| || || |||||| |||| | || ||||| ||| ||||||||
Sbjct: 85 ataaatctagatagatctatcta---tcat------caatatgaatgtgggaaatgctaa 35
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||| |||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 130/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | || ||||||| |||| |||||| ||| |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| |||| | | ||||||||||||| |||| || ||||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||| | ||||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtac 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 125/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||||||| | || || ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || || ||||||||||||||| ||| ||||||||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||| || | |||||||||||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 107 bits (54), Expect = 5e-23
Identities = 129/152 (84%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||| |||||||||||||| || ||||||||||||||||||| || ||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacattgat------gtta 57
Query: 66 atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| || || ||| ||||||||||||||| | || ||||||||| |||||||
Sbjct: 58 atgaatctagatagatatatgtctagattcattaacatcaatatgaatatgggaaatgct 117
Query: 124 agaatgacttacattgtgaaacggagggagta 155
| ||||||||| ||||||||||||||||||||
Sbjct: 118 aaaatgacttatattgtgaaacggagggagta 149
Score = 101 bits (51), Expect = 3e-21
Identities = 129/153 (84%), Gaps = 9/153 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| ||||| |||||||||||| |||||||| | |||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 66 atgaatctggac--gtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||| ||| ||| |||||||||||||||||| | ||| ||| |||||||
Sbjct: 89 atgaatctagacatatatctatctagattcattaaca------tcaatgtgggaaatgct 36
Query: 124 agaatgacttacattgtgaaacggagggagtac 156
|||| ||||||||||||||||| |||| |||||
Sbjct: 35 agaa-gacttacattgtgaaacagaggaagtac 4
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||| ||||||| ||||||||||||||| || ||| |||||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 65 aatgaatct--ggacgtattta--tctagattcattaacaactatgtgaatatggaaaat 120
| ||||||| | | |||| || |||||||||| ||||| | | |||||| || |||||
Sbjct: 64 agtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaat 123
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||| ||||||||||||| |||||| |||||||||
Sbjct: 124 gctacaatgacttacattatgaaacagagggagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||| ||||| |||| | |||||| |||||||||||||||||||||| |||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 147 gagggagta 155
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| | |||||||||| |||||||||| |||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 66 atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| || || | |||||||||||||| |||| ||||| || ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||||||| ||| ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 66 atgaatctgga----cgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| | ||| | ||||||||||||| || |||||||||| ||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | |||||||||| |||| |||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| |||| ||| |||||||||||||| | || || | ||| |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/155 (82%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| | |||||| ||| ||||| | ||||| | ||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 65 aatgaatctgga--cgtatttat--ctagattcattaacaactatgtgaatatggaaaat 120
||||||||| | | || ||| ||||||||||||||| ||| ||||||||| |||
Sbjct: 99 aatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
||||||| | |||||||||||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 65 aatga 69
|||||
Sbjct: 71 aatga 67
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 66 a 66
|
Sbjct: 65 a 65
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 92 tcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
||||||||| | || ||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 152 agta 155
||||
Sbjct: 127 agta 130
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||||||||||||| |||| ||||||||||||||||||||||||||| | |||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 66 at 67
||
Sbjct: 77 at 76
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| | || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagtac 156
|||||| |||||
Sbjct: 15 cggaggtagtac 4
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 103 bits (52), Expect = 7e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 2 cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 134 cttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 79
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
|||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatata 57
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 82 tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||||| ||||||||||||||||||||| |||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 130/156 (83%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||| ||||||| |||||||||||||| |||||||||||| | ||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgc 62
Query: 64 taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
||||||||| ||| ||| ||||||||||||||| || | || || || || | ||
Sbjct: 63 caatgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaa 122
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
| |||||||||||||||| ||||||||||||||||
Sbjct: 123 tagtagaatgacttacattatgaaacggagggagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||| || | || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 75 tctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 101 bits (51), Expect = 3e-21
Identities = 127/151 (84%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| |||||| | |||||||||||||||||| | || |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 66 atgaatctggac-gtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||| |||| ||| ||| ||||||||||||||| | | || ||||| ||| |||| |||
Sbjct: 95 atggatctagactatatctatctagattcattagtatcaatatgaatgtgggaaatacta 36
Query: 125 gaatgacttacattgtgaaacggagggagta 155
|||||||||| ||||||||||||||| ||||
Sbjct: 35 gaatgacttatattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 127/151 (84%), Gaps = 1/151 (0%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||||||| ||||||||||||||||| | | ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 66 atgaatctggacgtattta-tctagattcattaacaactatgtgaatatggaaaatgcta 124
|||||||| || || || ||||||| |||| || | || ||||| ||| ||||| |
Sbjct: 65 atgaatctagatagatatagtctagatccattggcatcaatatgaatgtgggaaatggtg 124
Query: 125 gaatgacttacattgtgaaacggagggagta 155
|||||||||||||| ||||||||||||||||
Sbjct: 125 gaatgacttacattatgaaacggagggagta 155
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 3e-21
Identities = 125/151 (82%), Gaps = 9/151 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||| ||||||||| |||||||||||||||||||||||||| | | ||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcataatctagata 86
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| ||| | |||||||||||||||| | || |||||||| |||||||||
Sbjct: 85 ---------gatatatatgtctagattcattaacatcaatatgaatatgagaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||||||||||| |||||||||||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagtac 4
Score = 93.7 bits (47), Expect = 7e-19
Identities = 124/151 (82%), Gaps = 9/151 (5%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||||||||| || |||||||| | |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| ||| ||| |||||| | |||| ||||| ||| |||||||||
Sbjct: 65 atgaatctagacatatatatctatctagatta---------tgaatgtgggaaatgctag 115
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||||||||||||| ||||||||| |||||
Sbjct: 116 aatgacttacattgtaaaacggaggaagtac 146
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||||||||||||||||||||| | |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 66 atgaatc 72
|||||||
Sbjct: 74 atgaatc 68
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
||||| |||||||||||| | || ||||| ||| |||||||| |||||||||||||||||
Sbjct: 62 tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 122 aacggaggaagta 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||| |||||||||| | ||||||||||||||||||||||| |||||||
Sbjct: 53 tgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 13 tccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||| ||||| | |||||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatat 56
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 84
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||| ||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4 atactccctccatttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||| | || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 125 cggaggaagta 135
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||| ||| |||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 66 atgaatctggacgtat----ttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| | |||| ||||||||||| |||| ||||||||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||| | ||||||| ||||||||||||||||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagtac 4
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||||||||||| |||||| | |||||| | | |||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 66 atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||| | ||| ||| | |||||||||||||||| |||| ||||||||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 66 atgaat 71
||||||
Sbjct: 54 atgaat 49
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtacg 157
||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtacg 3
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
|||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
||||||||||| | || ||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 150 ggagta 155
| ||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ggagta 155
| ||||
Sbjct: 10 gaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||| ||| |||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 66 atgaat 71
||||||
Sbjct: 65 atgaat 70
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 81 tgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 12 ctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||| ||||||| |||||||||||||| ||| ||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatat 78
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||| ||||||| | |||||||||| | |||||||||||| ||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtt 63
Query: 65 aatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaat 120
||||||||| ||| || | | | |||||||||||||| |||| ||||| |||| ||
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaa 123
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||| ||||||||||||||||
Sbjct: 124 cctagaaagtcttacattatgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | |||||| || |||||||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 66 atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | |||||||||||||||| |||| ||||| | || ||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 66 atgaat 71
||||||
Sbjct: 65 atgaat 70
Score = 97.6 bits (49), Expect = 4e-20
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
||||||||||| | || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ggagtac 156
| |||||
Sbjct: 10 gaagtac 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcattttccatattcatata 78
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/150 (82%), Gaps = 18/150 (12%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatat-------- 56
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||| ||| |||||||||||||||||| | || ||||| ||| ||||| |||
Sbjct: 57 -tga---------tatctatctagattcattaacatcaatatgaatgtgggaaatgttag 106
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||
Sbjct: 107 aatgacttacattgtgaaacggagggagta 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||| |||||||||||||||||| | |||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 66 atgaatct 73
||||||||
Sbjct: 76 atgaatct 69
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 99.6 bits (50), Expect = 1e-20
Identities = 93/107 (86%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatctggacgtatttatc---- 86
||||||||||||||||||||||||||| | ||||||||||||| ||| ||| ||||
Sbjct: 4 tcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatt 63
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
|||||||||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 83.8 bits (42), Expect = 7e-16
Identities = 91/107 (85%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatc----tggacgtatttatc 86
||||||||||||||||||||||||||| | |||||||||||| | || ||| | ||
Sbjct: 107 tcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtc 48
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
|||||||||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 79 tatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacatt 138
|||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||
Sbjct: 58 tattcatctagattcattaacattaatatgaatatggaaaatgctagaaggacttacatt 117
Query: 139 gtgaaacggagggagtac 156
|||||||||||| |||||
Sbjct: 118 gtgaaacggaggaagtac 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| || ||||||||||| ||| |||||||| |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 66 atgaatct 73
||||||||
Sbjct: 74 atgaatct 67
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 53 tgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | |||||||||| ||||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || | ||||||||||||| || ||| ||||| ||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/155 (82%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| | |||||||||| |||| |||||| ||| || |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 65 aatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaat 120
||||||||| ||| |||| | | |||||||||||||| ||| || || ||| |||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaat 40
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
||||||| | |||||||||||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/150 (82%), Gaps = 8/150 (5%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||| |||||||| | ||||| |||| | || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||| | || ||||||||||||| || | || ||||| || ||||||||||
Sbjct: 86 atgaatttaga--------tctagattcattagcatcaatatgaatgtgaaaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||| ||||||||||||||||||||||||||
Sbjct: 34 aataacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/152 (82%), Gaps = 8/152 (5%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||||||| | |||||||||||| ||||||||||| | ||
Sbjct: 3 tatactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgc 62
Query: 64 taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
|||||||||| | ||||| |||||||| || | || | ||| | |||||||||
Sbjct: 63 taatgaatctag--------atctaaattcattagcatcaatataaatgtagaaaatgct 114
Query: 124 agaatgacttacattgtgaaacggagggagta 155
| ||||| ||||||||||||||||||||||||
Sbjct: 115 aaaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||| ||||||||||| | || ||||||||||||||| ||||||||||||||||||||
Sbjct: 77 tatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtga 18
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||||||||||| |||||||| ||||| ||| |||||||| | |||
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgt 62
Query: 64 taatgaat 71
||||||||
Sbjct: 63 taatgaat 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 88 tgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtac 137
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
||||||||||||||| || || ||||| ||| |||||||||||||||||| |||||||
Sbjct: 60 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119
Query: 143 aacggagggagtac 156
||||||||||||||
Sbjct: 120 aacggagggagtac 133
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 81
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 53 tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/150 (81%), Gaps = 16/150 (10%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||||| ||||||||| || | || ||||| ||| |||||||||
Sbjct: 78 atgaatc----------------gattcattagcatcaatatgaatgtgggaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/150 (81%), Gaps = 16/150 (10%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
||||||| ||||||||| || | || ||||| ||| |||||||||
Sbjct: 65 atgaatc----------------gattcattagcatcaatatgaatgtgggaaatgctag 108
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||||||||
Sbjct: 109 aatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 97.6 bits (49), Expect = 4e-20
Identities = 125/151 (82%), Gaps = 7/151 (4%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | |||||||||| | |||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| ||| ||||||||||||||| |||| || || ||| ||||||||
Sbjct: 65 atgaatctagac-------actagattcattaacatctatatgtatgtgggcaatgctag 117
Query: 126 aatgacttacattgtgaaacggagggagtac 156
|| | |||||||| |||||||||||||||||
Sbjct: 118 aaagtcttacattatgaaacggagggagtac 148
Score = 95.6 bits (48), Expect = 2e-19
Identities = 124/150 (82%), Gaps = 7/150 (4%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | |||||||||| ||||||| ||||||| |||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|||||||| | | |||||||||||||||| ||| |||||| || ||||||||
Sbjct: 87 atgaatctag-------tgtctagattcattaacatctaagtgaatgtgagcaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
|| | |||||||||||||||||||| ||||
Sbjct: 34 aaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 133 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 81
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
||||||||||||||| || || ||||| ||| |||||||||||||||||| |||||||
Sbjct: 77 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18
Query: 143 aacggagggagtac 156
||||||||||||||
Sbjct: 17 aacggagggagtac 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 84 tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | | ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 65 aatgaatct 73
|||||||||
Sbjct: 56 aatgaatct 48
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||||||||||||| | | || ||||| ||| |||||||||||||||||||||| |||
Sbjct: 43 tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 103 aacggaggaagta 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcat 42
|||| ||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 97.6 bits (49), Expect = 4e-20
Identities = 89/102 (87%), Gaps = 4/102 (3%)
Strand = Plus / Minus
Query: 32 cattctagcatttcccacattcatatagttgttaatgaatctggacgtattta----tct 87
||||||| |||||||||||||||||||| ||||||||||||| || ||| || |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 88 agattcattaacaactatgtgaatatggaaaatgctagaatg 129
||||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 89.7 bits (45), Expect = 1e-17
Identities = 88/102 (86%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 32 cattctagcatttcccacattcatatagttgttaatgaatctggac----gtatttatct 87
||||||||||||| |||||||||||||| ||||||||||||| ||| ||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 88 agattcattaacaactatgtgaatatggaaaatgctagaatg 129
||||||||||||| |||| ||||| ||| ||||| |||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||||||||||||||| || ||||||||||||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaa 70
|||||
Sbjct: 65 atgaa 69
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 91 ttcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagg 150
|||||||||| | || ||||| ||| ||||||||||||||||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 151 gagta 155
||||
Sbjct: 9 aagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 124 agaatgacttacattgtgaaacggagggagta 155
|||||||||| |||||||||||| ||||||||
Sbjct: 69 agaatgacttgcattgtgaaacgaagggagta 100
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 66 atgaatct 73
||| ||||
Sbjct: 69 atggatct 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||||| |||||||| | || ||||| ||| |||||||||||||||||||||| |||||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 119 cggaggaagta 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 130 acttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| || |||||||||| ||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| |||| ||||| ||| |||||||||| |||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 145 cggagggagtac 156
|||||| |||||
Sbjct: 15 cggaggaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||| | |||||||| ||||||||||||||||
Sbjct: 85 aatgctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 86 ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
|||||||||||| || | || ||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 146 ggagggagta 155
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 66 atgaatct 73
||||||||
Sbjct: 83 atgaatct 76
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 86 ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
|||||||||||| || | || ||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 146 ggagggagta 155
||||| ||||
Sbjct: 134 ggaggaagta 143
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| |||||||||||| |||||||||||||| | |||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 66 atgaatct 73
||||||||
Sbjct: 72 atgaatct 65
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| | || ||||| ||| | |||||||||||||||| |||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 147 gagggagta 155
|||| ||||
Sbjct: 124 gaggaagta 132
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||| |||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 66 atgaatct 73
||||||||
Sbjct: 70 atgaatct 63
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| | || ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 147 gagggagta 155
|||||||||
Sbjct: 122 gagggagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||| |||||||||| ||| ||||| |||||||| |||||||||||| | |||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 66 at 67
||
Sbjct: 61 at 62
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||||||||||||| ||||||||||| | |||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 66 atgaatct 73
||||||||
Sbjct: 67 atgaatct 60
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||||||||||||||| | || ||||| || |||||||||||||||||| |||||||
Sbjct: 55 tatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtga 114
Query: 143 aacggagggagtac 156
|||||||| |||||
Sbjct: 115 aacggaggaagtac 128
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttc 45
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 121/146 (82%), Gaps = 4/146 (2%)
Strand = Plus / Minus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
||||||||||||||||||| ||||||||||||||| ||||||||||| | ||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 71 tctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatgctaga 126
||| ||| || | | |||||||||| | | || ||||| || | ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 127 atgacttacattgtgaaacggaggga 152
||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 93.7 bits (47), Expect = 7e-19
Identities = 121/146 (82%), Gaps = 4/146 (2%)
Strand = Plus / Plus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
||||||||||||||||||| |||||||||||| || ||||||||||| | | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 71 tctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatgctaga 126
||| ||| || ||| ||||||||||| ||| | || ||||| || ||||||||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 127 atgacttacattgtgaaacggaggga 152
||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 123/151 (81%), Gaps = 18/151 (11%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatat------- 85
Query: 65 aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
||| |||||||||| ||| ||||| | | || | ||| ||||||||||||
Sbjct: 84 --tga---------tatttatctaaatttattaatatcaatataaatgtggaaaatgcta 36
Query: 125 gaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 88 tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 132/160 (82%), Gaps = 4/160 (2%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||||||||||| | ||||| |||| ||||||||||||||| ||
Sbjct: 161 ttatactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatg 102
Query: 63 ttaatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaa 118
|||||||||| ||| ||| ||| |||||| |||| || |||| ||||| ||| |
Sbjct: 101 ctaatgaatctagacattattatatatatagatttattagcatctatatgaatgtgggta 42
Query: 119 atgctagaatgacttacattgtgaaacggagggagtacgt 158
|||||| || | |||||||| ||||||||||| |||||||
Sbjct: 41 atgctataaagtcttacattatgaaacggaggaagtacgt 2
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| | || ||||||| ||||||||||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 66 atgaatctggacgtatt----tatctagattcattaacaactatgtgaatatggaaaatg 121
|| ||||| | ||| | ||||||||||||| || |||| ||||| ||| ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||| | |||||||||||||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcata 56
|||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtacg 157
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagtacg 3
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 47 tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttc 45
|||| |||| |||||||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 82 ttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtg 141
||||||||||||||||||| | || ||||| | | |||||||||||||||||||||| ||
Sbjct: 50 ttatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatg 109
Query: 142 aaacggagggagta 155
||||||||||||||
Sbjct: 110 aaacggagggagta 123
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| |||||||||||||||| |||||||||| | |||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 63 atgaatct 56
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcattt 44
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||| ||||| ||||||| ||||||||||||| | ||||||||||||| |||
Sbjct: 134 tatacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgt 75
Query: 64 taatgaatct 73
||||||||||
Sbjct: 74 taatgaatct 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| |||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
Query: 145 cggagggagta 155
||||| ||||
Sbjct: 122 tggaggaagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
|||||| ||||||||||| ||||||| ||||||||||||| || | |||||||||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcattacctatattcatata 57
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||||| |||||||||| | | |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 66 atgaat 71
||||||
Sbjct: 66 atgaat 61
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
|||| ||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatata 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 91.7 bits (46), Expect = 3e-18
Identities = 92/107 (85%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatctggac----gtatttatc 86
||||||||||||||||||||||||||| | ||||||||||||| ||| ||| ||||
Sbjct: 107 tcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatc 48
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
|||||||||||||| | || ||||| || |||||||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 90/107 (84%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatc----tggacgtatttatc 86
||||||||||||||| ||||||||||| | |||||||||||| | || ||| | ||
Sbjct: 4 tcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtc 63
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
|||||||||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 82 ttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtg 141
||||||||||||||||||| | || ||||| ||| ||||| |||||||||||| ||||||
Sbjct: 62 ttatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtg 121
Query: 142 aaacggagggagta 155
||||||||||||||
Sbjct: 122 aaacggagggagta 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||| ||| |||||||| |||||||||||||||||| | |||
Sbjct: 137 tatactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgt 78
Query: 64 taatgaatct 73
||||||||||
Sbjct: 77 taatgaatct 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||||||||||||||| | || ||||| ||||||||| |||| |||||||||| ||||
Sbjct: 58 tatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtga 117
Query: 143 aacggagggagta 155
|||||||||||||
Sbjct: 118 aacggagggagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||||||||||| |||||| ||| |||| ||||| |||||||||||| | |||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 66 atgaatct 73
||||||||
Sbjct: 70 atgaatct 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||| |||||||| | |||||| |||||||||||||||||||||
Sbjct: 53 tgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
|||||| |||||||||||||||| || ||| | ||||||||| || |||||||||
Sbjct: 3 tatactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatata 57
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 88 tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 92 tcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
||||||||| | || ||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 152 agtac 156
|||||
Sbjct: 8 agtac 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||| |||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 66 atga 69
||||
Sbjct: 65 atga 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatat 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||| |||||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 80 tgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagtac 129
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||| | ||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 65 aatgaatct 73
|||||||||
Sbjct: 64 aatgaatct 72
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 79 tatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacatt 138
||||| |||||||||||||||| | || ||||| || |||| |||||||||||||||||
Sbjct: 81 tatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacatt 22
Query: 139 gtgaaacggagggagta 155
||||||||||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||| ||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatat 79
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||| ||||| ||||||||||
Sbjct: 92 aaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 83 tgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53 tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatat 80
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| |||| || | |||||||||| ||||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 66 atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| | |||||||||||||||| ||||| | | || | ||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||| | |||||||||||||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| ||| ||||| ||| |||||||||| | ||| |||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 147 gagggagtac 156
|||| |||||
Sbjct: 13 gaggaagtac 4
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatat 86
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 89 tgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcat-tctagcatttcccacattcatatagttgtt 64
|||| ||||||||||||||||||| || |||| |||||||||||||||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 65 aatgaatct 73
|||||||||
Sbjct: 65 aatgaatct 73
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 108 gaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tggaaaatgctagaatgacttacattgtgaaacggagggagtac 117
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
|||| ||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattc 53
|||| |||||||||||||||| || |||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||||||||||||| ||||||||||| | || ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 66 atgaatct 73
||||||||
Sbjct: 75 atgaatct 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| |||| ||||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatat 56
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 88 agattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgg 147
|||||||||| || | || ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 148 agggagta 155
||| ||||
Sbjct: 128 aggaagta 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||| ||||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacatcgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacgga 148
||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 53 tgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||| ||| |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 71 tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 13 tccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatat 56
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| |||||||||||||||||||||||| || | | |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 66 atgaatct 73
||||||||
Sbjct: 75 atgaatct 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 88 agattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgg 147
||||||||||| | | |||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 148 agggagta 155
||| ||||
Sbjct: 128 aggaagta 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||| || |||||||||||||||||| ||||||||||||||||||||
Sbjct: 56 atgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattca 54
|||| ||||||||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattca 53
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 66 atgaatct 73
|| |||||
Sbjct: 74 ataaatct 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||| ||||||| |||| ||||| ||| |||||||||| | ||||||||||||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 124 cggaggaagta 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||| | |||||| | |||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacaatatgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||||||| ||| |||||||||||||||||||||| ||| | |||
Sbjct: 123 tatactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgt 64
Query: 64 taatgaa 70
|||||||
Sbjct: 63 taatgaa 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 83 aaatgctagaatgacttagattgtgaaacggagggagta 121
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||| ||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 53 tgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
|||||||| ||||||||||||||||||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcat 42
|||| ||||||||||||||||||| ||| ||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatat 81
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||||||||||| || | || | ||||||| |||||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| |||||||| |||||||||| ||||| |||||||||||| ||| |||| | || |
Sbjct: 4 atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 65 aatgaatct 73
|||||||||
Sbjct: 64 aatgaatct 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| ||||||||||||| |||||||||||||||||||| ||||
Sbjct: 84 tgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 63
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 3 tatactccctccgtttcacaatataagtcattctagcattt-ccacattcatat 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 66 tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||| ||||||| |||| ||||| |||| ||||||||||| ||||||||| |||||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 127 cggagggagta 137
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||| ||||||| | ||||||||||| |||||||||||||| ||
Sbjct: 140 ttatactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatg 81
Query: 63 ttaatgaatct 73
||||| |||||
Sbjct: 80 ttaataaatct 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||||||||||||||| ||||||| | ||||||||||| |||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattcacatag 58
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 102 ctatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||| ||| ||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 58 ctatgtgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||||||||||| || | || ||||||||| |||| ||||||||||||||||| |||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 126 cggagggagta 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||| |||||||| |||||||| | || ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 66 atgaatct 73
||||||||
Sbjct: 76 atgaatct 69
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| | ||||||| ||||| || ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 53 tgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||| ||||||| |||| ||||| |||| |||||||||| | ||||||||||||||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 130 cggagggagta 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 66 atgaatct 73
|| |||||
Sbjct: 80 ataaatct 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 102 ctatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||| |||||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 58 ctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| |||| |||||| ||||||| ||||||||||||| ||||||| ||||||| ||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 65 aatgaatctggacgt 79
||||||||| |||||
Sbjct: 73 aatgaatctagacgt 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| |||| || || ||| ||||||||||||| ||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 145 cggagggagta 155
| |||||||||
Sbjct: 122 cagagggagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||||||||||||||| ||||||| ||||||||||||| |||| || |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatatag 58
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tggaaaatgctagaatgacttacattgtgaaacggagggagta 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| |||||||||||||| ||||| | |||| | |||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 66 atgaatct 73
|| |||||
Sbjct: 79 ataaatct 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagtacg 157
||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 44 aaaatgctaaaatgacttacattgtgaaatggagggagtacg 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcattt 44
|||| ||||| ||||||||||||| ||||| ||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
|||||| ||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagcatttcccacatttatata 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 14 ccgtttcacaatgtaattcattctagcatttcccacattcatata 58
|||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatata 54
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacgg 147
|||||||||||||||||||||||||||||||
Sbjct: 68 aaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| | || | | | |||||||||||||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 147 gagggagtac 156
||||||||||
Sbjct: 13 gagggagtac 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||||||||| ||||| | |||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 127 atgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||
Sbjct: 3 tatacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgt 62
Query: 64 taatgaatct 73
||||||||||
Sbjct: 63 taatgaatct 72
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| ||| ||||| |||| |||||||||| | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| | || ||||| || |||| ||| |||||||||||||||||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 145 cggagggagtacgt 158
||||||||||||||
Sbjct: 137 cggagggagtacgt 150
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||| ||| ||||| ||||||||||| | |||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 66 atgaatct 73
||||||||
Sbjct: 87 atgaatct 80
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/155 (81%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | || ||| ||| || ||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| ||| ||||||| ||||||| ||| || || ||| ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
|||||| | ||||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtac 159
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| | |||||||||| ||||||| ||| ||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 66 atgaatct 73
|| |||||
Sbjct: 98 ataaatct 91
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 3 tatactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgttt-cacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacattcatat 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||| ||| |||||||||||||||||| |||||||||
Sbjct: 67 tgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||| ||||||| | |||||||||| ||||||||||||||| ||
Sbjct: 2 ttatactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 61
Query: 63 ttaatgaat 71
|||||||||
Sbjct: 62 ttaatgaat 70
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||| ||||||||||| |||| ||||| ||| |||||||||| | |||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||| ||||||||||| ||||||| | |||||||||| |||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatag 89
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||| | |||||||| |||||||||||||||||
Sbjct: 105 aatgctagaaagtcttacattatgaaacggagggagtac 143
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53 tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77 tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatat 74
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||| | | || |||||||| |||||||||||||||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 147 gagggagta 155
|||||||||
Sbjct: 118 gagggagta 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||| ||| |||||||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| ||||||||||||||| || |||||||| | | |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 66 atgaatct 73
||||||||
Sbjct: 66 atgaatct 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 47 tggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||||||| |||||| ||| |||||||| |||||| || |||||||| | || ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 66 atgaatctggacgtatttatctag----attcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| |||||| |||||||| || | || ||||||||||||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||| | |||| |||||||| ||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
||||||||||| || | || |||||||| ||||| |||||||||||| |||||| ||||
Sbjct: 90 tagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaacg 149
Query: 147 gagggagta 155
|||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagtt 61
||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagtattttccacattcatagagtt 60
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||||||| ||||| | ||| |||||| ||||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 66 atgaatct 73
||||||||
Sbjct: 79 atgaatct 72
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 2 cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1 cttatactttctctgtttcacaatgtaagtcattctagcatttcccgcattcatata 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||||||||||| || | || |||||| ||||||||||| ||||||||| |||||||||
Sbjct: 62 tctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaa 121
Query: 145 cggagg 150
||||||
Sbjct: 122 cggagg 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 7 acttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaa 66
||||||||||||||||||| ||| ||||| |||||||| || |||||||| | || |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 67 tgaatct 73
|||||||
Sbjct: 71 tgaatct 65
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaac 145
|||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53 tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 77 tgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatat 74
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
|||||||||||||||||||||| || ||||| |||||||||||| |||||||| | ||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 65 aatgaatct 73
||| |||||
Sbjct: 77 aataaatct 69
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||| ||||||| | || ||||||||| |||||||| |||||||| ||||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 126 cggaggaagta 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattca 54
|||||||||||||||||||||||| | ||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 104 atgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||| ||| |||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 56 atgtgaatgtgggaaatactagaataacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
|||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatt 43
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | |||||||||| | ||||| ||||||| |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 66 atgaatct 73
||||||||
Sbjct: 98 atgaatct 91
Score = 65.9 bits (33), Expect = 2e-10
Identities = 124/154 (80%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||| ||||||||| | || || ||| || |||||||| ||| |||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 66 atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
|||||| | ||| ||| || | |||||||||||||| |||| || || || ||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccac 49
|||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccac 48
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacgga 148
||||||||||||||||| |||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatt 43
|||||| ||||||||||||| ||| |||||||||||||
Sbjct: 104 tacttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccaca 50
|||| ||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||| ||||||||| ||||||||||||||
Sbjct: 69 aaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatat 58
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagggagtac 156
|||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 61 tgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcatt 35
|||| ||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| |||| ||||| |||| |||||||||| | |||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 145 cggagggagtac 156
| ||||||||||
Sbjct: 122 cagagggagtac 133
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||| |||||| ||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 66 atgaatct 73
||||||||
Sbjct: 72 atgaatct 65
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
||||||||||| ||||| ||||||| | |||||||||| ||||||||||||||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattgtccacattcatatag 58
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 3 tatacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagtac 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||| |||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagc 40
|||| ||||||||||||||||||| ||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 79.8 bits (40), Expect = 1e-14
Identities = 122/151 (80%), Gaps = 10/151 (6%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| ||| |||||||||| ||||||| | | ||||| ||| |||| ||||
Sbjct: 65 at----------atatatatctagatttattaacatcactatgaatgtgggaaatactag 114
Query: 126 aatgacttacattgtgaaacggagggagtac 156
||||||||||||| |||||| ||||||||||
Sbjct: 115 aatgacttacattatgaaacagagggagtac 145
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/150 (80%), Gaps = 10/150 (6%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||| |||||| ||||||| ||||||||| |||||||||||||||| | |||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 66 atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
|| ||||| || ||| ||| ||||||| | | ||||| || ||||||||||
Sbjct: 84 ataaatctaga--tatatat--------attaacatcactatgaatgtgaaaaatgctag 35
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||| ||||||||||| ||||
Sbjct: 34 aatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||||||||||| |||||||||||||| ||| || |||| | |||
Sbjct: 133 tatacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgt 74
Query: 64 taatgaat 71
||||||||
Sbjct: 73 taatgaat 66
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 115 gaaaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 45 gaaaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 92 aaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcattt 44
|||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||| |||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 13 tccgtttcacaatgtaattcattctagcatt 43
|||||| |||||||||| |||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||| ||| |||| |||||||||||| | |||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 66 atgaatct 73
||||||||
Sbjct: 70 atgaatct 63
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| | || ||||| |||||||| ||| ||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 147 gagggagta 155
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||| | | ||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||| ||||||||||||||||||| ||||| | | |||| ||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcatttttgtattttccacattcatat 56
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | |||||||||| ||||||||||||||| |||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 66 atgaatct 73
||||||||
Sbjct: 80 atgaatct 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| |||| ||||| ||| |||||||||| | |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 147 gagggagtac 156
||||||||||
Sbjct: 132 gagggagtac 141
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||| ||| |||||||| ||||| |||||||||||| | |||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 66 atgaatct 73
||||||||
Sbjct: 79 atgaatct 72
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| | || ||||| ||||||||| |||||||||||| ||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 129 cggaggaagta 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 44 aaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcattt 44
|||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||||||||||||||| | || ||||| || |||||| ||||||| |||||||| |||
Sbjct: 58 tatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatga 117
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 118 aacggaggaagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| ||||||| ||||| ||||||||||| | |||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 66 atgaatct 73
||||||||
Sbjct: 70 atgaatct 63
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatat 87
Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggaggga 152
||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggga 8
Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggaggga 152
||||||||||||||||||||||||||||||||||||
Sbjct: 100 aaatgctagaatgacttacattgtgaaacggaggga 135
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| |||| | |||||||| |||||||||| | |||||||| |||||
Sbjct: 67 tctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaa 126
Query: 145 cggagggagta 155
||||| |||||
Sbjct: 127 cggagagagta 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 12 ctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaat 71
|||||||||| ||||||| | |||||||||| ||| ||| |||||| |||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 72 ct 73
||
Sbjct: 71 ct 70
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 127/156 (81%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
||||||||||| |||||| ||||||| | ||||||| || |||||||| |||||| |
Sbjct: 3 tatacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatac 62
Query: 64 taatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaa 119
|||||||||| ||| ||| | | |||||||||||| || ||| ||||| ||| ||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaa 122
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
|||||||| | |||||||| ||||||||||||||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| | |||||||||| |||||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 66 atgaatct 73
||||||||
Sbjct: 98 atgaatct 91
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 58 aatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcattt 44
||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 105 atactccctccgtttcacaatgtaaatcattctagcattt 66
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagtac 156
||||| ||||||||||||| ||||||||||| |||||||||
Sbjct: 44 aaaatactagaatgacttatattgtgaaacgaagggagtac 4
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 tggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccaca 50
||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 109 atacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
|||| ||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 115 gaaaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 45 gaaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||| ||||| ||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63
Query: 66 atgaat 71
||||||
Sbjct: 64 atgaat 69
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 115 gaaaatgctagaatgacttacattgtgaaacggaggg 151
|||||||||||||||||||||||||||||||||||||
Sbjct: 72 gaaaatgctagaatgacttacattgtgaaacggaggg 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 11 cctccgtttcacaatgtaattcattctagcattt 44
||||||||||||||||||| ||||||||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 86 ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
|||||||||||| || | || |||| || |||||| |||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 146 ggagggagta 155
||||||||||
Sbjct: 122 ggagggagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||||||||||| |||||||| ||||| ||| ||||||| | || |
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 65 aatgaatct 73
|||||||||
Sbjct: 72 aatgaatct 64
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggaggga 152
||||| |||||||||||| |||||||||||||||||
Sbjct: 43 aaatgatagaatgacttatattgtgaaacggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||| ||| |||||||| |||||| || ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 40 catttcccacattcatatagttgttaatgaatctggacgtatttatctagattcattaac 99
|||| |||||||||||||| ||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagacatatatatctagattcattaac 64
Query: 100 aactatgtgaatatggaaaatgctag 125
| ||| ||||| ||| ||||||||
Sbjct: 65 atatatatgaatgtgggcaatgctag 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 36 ctagcatttcccacattcatatagttgttaatgaatctggacgtatttatctagattcat 95
|||||||| |||||||||||||| ||||||||||||| || ||| | |||||||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctagatatatatgtctagattcat 31
Query: 96 taaca 100
|||||
Sbjct: 30 taaca 26
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttc 45
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 128 tatacttcctccgtttcacaatgtaagtcattctagcatttc 87
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||| ||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 56 atgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattca 54
|||| ||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattca 53
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||| | | ||| | |||||||||| ||||||||||||||| |||
Sbjct: 3 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62
Query: 64 taatgaatct 73
||||||||||
Sbjct: 63 taatgaatct 72
Score = 69.9 bits (35), Expect = 1e-11
Identities = 127/158 (80%), Gaps = 6/158 (3%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||| ||||||||||| | | ||| | |||||||||| ||||||||||||||| |||
Sbjct: 162 tatactccctccgtttcatattataagactttctagcattgcccacattcatatagatgt 103
Query: 64 taatgaatct------ggacgtatttatctagattcattaacaactatgtgaatatggaa 117
|||||||||| || ||| ||| |||||||||||||| |||| ||||| |||
Sbjct: 102 taatgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggc 43
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||| | |||| | | ||||||||||| ||||
Sbjct: 42 aatgctagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
|||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgagttacattgtgaaacggagggagtac 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
||||||||| |||| ||||||| || ||||| ||||||||||||||||||||| | ||
Sbjct: 116 tatacttccctcgttccacaatgcaagtcattttagcatttcccacattcatattgatgc 57
Query: 64 taatgaat 71
||||||||
Sbjct: 56 taatgaat 49
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 75.8 bits (38), Expect = 2e-13
Identities = 130/159 (81%), Gaps = 5/159 (3%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||| | | ||| | |||||||||| ||||||||||||||| ||
Sbjct: 2 ttatactccctccgtttcatattataagactttctagcattacccacattcatatagatg 61
Query: 63 ttaa-tgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaa 117
|||| | ||||| ||| || |||||||||||||||||| |||| ||||| |||
Sbjct: 62 ttaaattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggc 121
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||| | |||| | | |||||||||||||||||
Sbjct: 122 aatgctagaaagtcttataatctgaaacggagggagtac 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 105/127 (82%), Gaps = 5/127 (3%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatctggacgtattta----tctag 89
|||||||||| ||||||||||||||| ||||||||||||| || ||| || |||||
Sbjct: 131 ttctagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctag 72
Query: 90 attca-ttaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgga 148
||| | |||||| |||| ||||| ||| |||||||||| | |||| | | |||||||||
Sbjct: 71 attaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacgga 12
Query: 149 gggagta 155
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| | || ||||||| ||||||| || ||| | |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 66 atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || ||| ||| ||||||||||||||| |||| | || |||| ||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||| | |||||||| ||||||||||||||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 126/155 (81%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||| ||||||| | ||||| |||| |||||| |||||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtt 61
Query: 65 aatgaatctgga--cgta--tttatctagattcattaacaactatgtgaatatggaaaat 120
||||||||| || | || | |||||||||||||||| | ||| | ||| |||| |||
Sbjct: 62 aatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaat 121
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
|||| || | |||||||||||||||||||| ||||
Sbjct: 122 gctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| ||| |||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 66 at 67
||
Sbjct: 65 at 66
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 94 attaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggag 153
||||||| | || ||||| |||||||| ||| ||||||||||||||||||||||||| ||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 154 ta 155
||
Sbjct: 6 ta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 126 aatgacttacattgtgaaacggagggagta 155
|||| |||||||||||||||||||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||| | | ||| | |||||||||| ||||||||||||||| |||
Sbjct: 128 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 69
Query: 64 taatgaatct 73
||||||||||
Sbjct: 68 taatgaatct 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| |||| ||||| ||| |||||||||| | |||| | | |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 116 cggaggaagta 126
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 82 ttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtg 141
|||||||||||||||| | | || | |||||| ||||||||| ||||| ||||||||||
Sbjct: 33 ttatctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtg 92
Query: 142 aaacggagggagtacgt 158
||| |||||||||||||
Sbjct: 93 aaatggagggagtacgt 109
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcatt 35
||||||||||||||||||||||||| |||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcatt 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcattt 44
|||| ||||| ||||||||||||| ||||| ||||||||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcattt 68
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 84 atctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaa 143
|||||||||||||| || |||| ||||||||| |||||||||| | |||| ||| ||||
Sbjct: 69 atctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaa 128
Query: 144 acggagggagtac 156
|||||||||||||
Sbjct: 129 acggagggagtac 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 84 atctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaa 143
||||||||||||||||| |||| |||||||| |||||||||| |||||| ||| ||||
Sbjct: 76 atctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaa 17
Query: 144 acggagggagta 155
|| |||| ||||
Sbjct: 16 acagaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||| |||||| ||| ||| || |||||||||| | || |||||||||| |||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||| ||| | |||||||||| |||| |||||||||| || ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 66 atgaatct 73
||||||||
Sbjct: 80 atgaatct 73
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||| ||||||| | || ||||||| ||||||||||||||| ||
Sbjct: 145 ttatactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatg 86
Query: 63 ttaatgaat 71
|||||||||
Sbjct: 85 ttaatgaat 77
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||| ||||||||||| ||||||| | |||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatag 58
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||| | |||||||| |||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggagggagtac 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||| ||||||||||| |||| ||||| ||| ||||||| || | ||||||| |||||
Sbjct: 72 tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 132 cggagggagta 142
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||||||||||| ||||| ||||||||| || ||| |||| | || |
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 65 aatgaatct 73
|||||||||
Sbjct: 64 aatgaatct 72
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 91 tgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||||||||||| || | || | |||||| |||||||| |||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||| ||||||||||||||| ||| ||||| |||||||| ||||||||||||
Sbjct: 140 atactccctccgtttcacaatataagtcattttagcattttccacattcatat 88
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||||||||||||||| | || || | || ||||||||| |||||||||||||||||
Sbjct: 58 tatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtga 117
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 118 aacggaggaagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| ||||| |||||||| ||| | ||||| | |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 66 atgaatct 73
||||||||
Sbjct: 70 atgaatct 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||| ||| ||||||||||||||| |||||||||||||||
Sbjct: 43 aaatactaaaatgacttacattgttaaacggagggagtac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||| ||||||||| ||||| ||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 125/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| | | ||| | |||||||||| ||||||||||||||| || ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 66 atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| || | ||| |||||||||| |||| ||| | ||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||| | | ||||||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||| ||||||||||| | | ||| | |||||||||| |||||| |||||||| ||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtt 63
Query: 65 aatgaa 70
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||| || ||||||||||||| |||||| |||||||||
Sbjct: 104 aaaatgttaaaatgacttacattatgaaacagagggagta 143
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
|||||||||||||||||| | || | | || |||||||||||||||||||||||||||
Sbjct: 58 tatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtga 117
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 118 aacggaggaagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||||||||||||| ||| | |||| | |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 66 atgaatct 73
||||||||
Sbjct: 70 atgaatct 63
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||| ||||||||||||||||||| |||||||||||||||
Sbjct: 43 aaatactagaatgacttacattgttaaacggagggagtac 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||| ||||||||| ||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| ||||||| ||||| ||||| || |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 66 atga 69
||||
Sbjct: 65 atga 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| |||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatat 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 75 tgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 92 tcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
||||||||| | || ||||| |||||| ||||| ||||||||||||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 152 agta 155
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||||||| ||| ||||| ||||||||| || ||| |||| | |||
Sbjct: 124 tatacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgt 65
Query: 64 taa 66
|||
Sbjct: 64 taa 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||||||| ||||| ||||||||| || ||| |||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 66 a 66
|
Sbjct: 65 a 65
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 84 aaatgctaaaatgacttatattgtgaaacggaggaagta 122
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| | ||| ||| |||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatat 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||||||||||| | ||| || ||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatat 56
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 92 tgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 130 acttacattgtgaaacggagggagta 155
||||||||||||||||||||| ||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||||| |||| |||||| ||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaa 16
Query: 145 cgga 148
||||
Sbjct: 15 cgga 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcattt 44
|||||||| ||||||||||||| ||| ||||| ||||||||
Sbjct: 3 tatacttcttccgtttcacaatataagtcattttagcattt 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
||||| || |||||| || ||||||||| ||||||||||||||||
Sbjct: 82 tgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||| ||| ||||| || ||||| |||||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatat 87
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
||||||||||| |||||| ||| ||| |||||||||||||| ||||||||||| | ||
Sbjct: 3 tatacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgc 62
Query: 64 taatgaatct 73
||||||||||
Sbjct: 63 taatgaatct 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
||||||||||||||| || | | ||||| |||||||||||||||||||||| ||| |||
Sbjct: 77 tatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatga 18
Query: 143 aacggagggagta 155
||| |||| ||||
Sbjct: 17 aacagaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| ||| |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 90 tgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||| |||||||||||||| | |||||||||| ||||||||||| ||| |||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| ||| ||||| ||| |||||||||| | |||||||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaaca 14
Query: 147 gagggagta 155
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||||||| |||||| |||| ||||| |||| |||||||||| | |||||||| |||||
Sbjct: 38 tctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 97
Query: 145 cggaggga 152
||||||||
Sbjct: 98 cggaggga 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
||||||||||| ||||||| | |||||||||| |||||||||||||| |||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 71 tct 73
|||
Sbjct: 43 tct 41
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 108 gaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||| |||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattc 53
|||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttc 45
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||| ||||||| |||||||||| |||| |||||||||| | |||| | | |||||
Sbjct: 75 tctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaa 16
Query: 145 cggagggagtac 156
||||||||||||
Sbjct: 15 cggagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
||||||||||||||||| | | ||| | |||||||||| |||||||||||||| ||||
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| | |||||||||| ||||||| ||||||| |||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 66 atgaatct 73
||||||||
Sbjct: 76 atgaatct 69
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| |||| || || ||| |||||||||| | |||| |||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 147 gagggagta 155
|||||||||
Sbjct: 128 gagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||||||| ||| | |||||||||| ||||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| |||| || || ||| |||||||||| | |||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 147 gagggagta 155
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
||||||||| |||||| |||| ||||||||| |||||||||| | |||||||| |||||
Sbjct: 75 tctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaa 16
Query: 145 cggaggga 152
||||||||
Sbjct: 15 cggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
||||||||||| ||||||| | |||||||||| ||| |||||||||| |||||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 71 tct 73
|||
Sbjct: 70 tct 72
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
||||| |||||||||||||||||| |||||||||||||||| |||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcatttcctacatt 43
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggag 149
|||||||||||||||||||||||||||||||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaacggag 83
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctag 39
||||||||||||||||||||||||| |||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctag 38
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 90 aaatgctagaatgacttacattatgaaacggagggagta 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
|||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 47 tggaaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||| ||||||| ||||||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacgaagggagta 146
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccac 49
||||| ||||||||||| ||| ||| |||||||||||||| ||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcattttccac 48
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttc 45
|||| ||| ||||||| ||||||| |||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttc 107
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 126/156 (80%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
|||||||||| |||||| ||||||| | ||||||| || |||||||||||||| ||||
Sbjct: 4 atacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtt 63
Query: 65 aatgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaat 120
||||||||| | || ||| | | |||||||||| | | |||| ||||| ||| |||
Sbjct: 64 aatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaat 123
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
|||| || | |||||||| |||||| ||||||||||
Sbjct: 124 gctaaaaagtcttacattatgaaaccgagggagtac 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 122/154 (79%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| |||| |||||| ||||||| | || ||||||| ||||||||||||||| | | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 66 atgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| || || | | |||||||||||||||| ||| ||||| ||| || |
Sbjct: 98 atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||||||| |||||| |||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaaccgaggaagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||||||| | |||| || |||||| ||| |||||||||||||||| |||||
Sbjct: 75 tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||||||||||||||| ||||||| ||||||||||||| | ||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatag 83
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
||||||||||||||||||||| ||||||||||| |||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagtac 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||| ||||||||||| ||||||| |||||||| ||| |||| || ||||||| | |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 47 tggaaaatactagaatgacttacattatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 93 aatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
||||| ||||||||||| ||||||| ||||||||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagtattttccacat 50
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
|||||||||| ||||| | || |||| ||||||||| |||||||||||||||| | |||
Sbjct: 68 tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaa 127
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 128 cggagggagta 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||| ||||||| |||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||||||| ||||||||||||||||
Sbjct: 43 aaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||| ||||||||||||||||| | |||||||||| |||||||||||||
Sbjct: 128 tatacttcatccgtttcacaatgtaagactttctagcattgcccacattcatat 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacgga 148
|||||||||| | ||||||||||||||||||
Sbjct: 89 aatgctagaaagtcttacattgtgaaacgga 119
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||| ||||||| | || || ||||||| |||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 66 atgaat 71
||||||
Sbjct: 77 atgaat 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
||||||||||| |||| || ||||| ||||||| |||| |||||||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 150 ggagtac 156
| |||||
Sbjct: 132 gaagtac 138
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||||||||||| | |||||||| || |||||||||| ||| |||
Sbjct: 141 tatacttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatgt 83
Query: 64 taatgaatct 73
|| |||||||
Sbjct: 82 tattgaatct 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||| | |||||||||||||||||||| ||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggaggaagta 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatt 43
|||||||||||||||||||||| ||| | ||||||||||
Sbjct: 3 tatacttcctccgtttcacaatctaagcctttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||| | |||| ||||||||||||||| ||||
Sbjct: 42 aatgctagaaaggcttagattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
|||||||||||||||||| | | ||| | |||||||||| ||||||||||||||| |||
Sbjct: 3 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62
Query: 64 taatgaatct 73
||| ||||||
Sbjct: 63 taacgaatct 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 86 ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
|||||||| |||||| |||| ||||| ||| |||||||||| | |||| | | ||||||
Sbjct: 74 ctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 15
Query: 146 ggagggagta 155
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
||||||||| |||||||||||||| | ||||||| || ||||||||||||||| | |||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 66 atgaat 71
||||||
Sbjct: 54 atgaat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
||||||||| | |||| ||||| ||| || ||||||| | ||||||||||||||| |||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 150 ggagta 155
| ||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||||||| |||| ||||||| | || || ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 66 atgaat 71
||||||
Sbjct: 65 atgaat 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
||||||||||| |||| || ||||| ||||||| |||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 150 ggagtac 156
| |||||
Sbjct: 10 gaagtac 4
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||||||||||||||| ||||| ||| ||||||||||||||| |||||| ||||
Sbjct: 95 tatacttcctccgttttacaatataagtcattctagcatttctcacatttatat 42
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 55 aaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtgaaacggagggagta 155
||||||||| |||||||||||||| |||||
Sbjct: 34 aatgacttatattgtgaaacggagagagta 5
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||||||||||||||||||||||| | ||||||| || |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatag 58
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
|||| ||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatag 67
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 121 gctagaatgacttacattgtgaaacggagggagtacgt 158
||||||| | |||||||||||||||||||| |||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagtacgt 2
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
|||||||||| |||||||||||||||||||||||||
Sbjct: 83 aatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 83 tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
||||||||||||||| || | || | |||||| |||| ||||||||||||| |||||||
Sbjct: 77 tatctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtga 18
Query: 143 aacggagggagtac 156
|||||||| |||||
Sbjct: 17 aacggaggaagtac 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||||||| ||| ||||||||| ||||| || ||| |||| | || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 66 atgaatct 73
||||||||
Sbjct: 65 atgaatct 72
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
|||||||| ||||||||||||| |||||||||||||||||
Sbjct: 90 aaatgctacaatgacttacattatgaaacggagggagtac 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttc 45
|||| ||||||||||| ||||||| ||||| |||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttc 89
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 4 tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
||||||||||||||||||||||| || ||||||||| |||| |||||| ||||
Sbjct: 110 tatacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatat 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| |||||||||||| |||||||||||||||| ||||
Sbjct: 69 aaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattcta 38
|||| ||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| || ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
||||| || ||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 68 tgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||||||||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
|||| ||||| ||||| ||||||| ||||||||| |||| |||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatat 65
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 124/154 (80%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||||||||| ||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 66 atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
|||||||| ||| ||| || | |||||||||| ||| |||| |||| ||||| |||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
|||||| | |||| | | ||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggagta 158
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| |||||| || ||| |||||||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 147 gagggagta 155
|||||||||
Sbjct: 13 gagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 3 ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
||||||| ||||||||||||||||||| |||||||||| ||||||| | |||| ||
Sbjct: 2 ttatactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatg 61
Query: 63 ttaatgaatct 73
|||||||||||
Sbjct: 62 ttaatgaatct 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
||||||||||||| |||||| ||| | |||||||||| | |||||||||
Sbjct: 138 tacttcctccgttccacaatataagactttctagcattactcacattcat 89
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatctggacgtatttatctaga 90
||||||||||||||||||||||||||| | |||||||| |||| || || ||||||||
Sbjct: 120 tcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatctaga 61
Query: 91 ttcattaac 99
| |||||||
Sbjct: 60 tacattaac 52
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatct 73
||||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 4 tcattctagcatttcccacattcatattgatgttaatgtatct 46
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 62 gttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
||||||| |||| || ||| ||||||||| |||||||| | || ||||| ||| |||||
Sbjct: 52 gttaatgtatctagatatatctatctagatacattaacatcaatatgaatgtgggaaatg 111
Query: 122 ctagaatgactt 133
||||||||||||
Sbjct: 112 ctagaatgactt 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 84 atctagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
|||||||| |||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 50 atctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 28 aattcattctagcatttcccacattcatatagttgttaatgaatc 72
|||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 90 aattcattctagcatttcccacattcatattgatgctaatgaatc 46
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatc 72
||||||||||||||||||||||||||| | || |||||||||
Sbjct: 4 tcattctagcatttcccacattcatattgatgctaatgaatc 45
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 82/98 (83%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatctgg----acgtatttatctag 89
|||||||||| ||||||||||||||| ||||||||||||| | || || | |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaa 127
||||||||||| ||| ||||| |||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtggacaatgctagaa 9
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/98 (83%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatctggac--gtatttat--ctag 89
|||||||||| ||||||||||||| ||||||||||||| ||| |||| | | ||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaa 127
||||||||||| |||| ||||| ||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 82/98 (83%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatctggacgtatttat----ctag 89
|||||||||| ||||||||||||||| ||||||||||||| | | ||| | | ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaa 127
||||||||||| ||| ||||||||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaa 9
Score = 50.1 bits (25), Expect = 9e-06
Identities = 80/98 (81%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatctgg----acgtatttatctag 89
|||||||||| |||| ||||||||| ||||||||||||| | || ||| | ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaa 127
||||||||||| |||| ||||| ||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 82/98 (83%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatctgg----acgtatttatctag 89
|||||||||| ||||||||||||||| ||||||||||||| | | ||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaa 127
||||||||||| ||| ||||| ||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
Score = 65.9 bits (33), Expect = 2e-10
Identities = 82/98 (83%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatctggacgtatttat----ctag 89
|||||||||| |||||||||||||| ||||||||||||| || ||| ||| ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 90 attcattaacaactatgtgaatatggaaaatgctagaa 127
||||||||||| |||| ||||| ||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggag 149
||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 43 aatatagaaaatgctagaatgacttatattgtgaaacggag 83
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 5 atacttcctccgtttcacaatgtaattcattctagcat 42
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 4 atacttcctccgtttcacagtgtaagtcattctagcat 41
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
|||||||||||||||||| ||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcattt 44
||||| |||||||||||||| ||| ||||||||||||||
Sbjct: 89 tacttactccgtttcacaatataagtcattctagcattt 51
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatct 73
|||||||||| ||||||||||||||| |||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatct 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| |||| ||||| ||| |||||||||| | |||| | | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 147 gagggagtac 156
|||| |||||
Sbjct: 124 gaggaagtac 133
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
|||| |||||||||| | ||||||||||||||||||||||||||
Sbjct: 47 tggacaatgctagaaagccttacattgtgaaacggagggagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 88 agattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgg 147
||||||||||||| ||| | ||| |||| ||| |||||| | |||||||||||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 148 aggga 152
|||||
Sbjct: 111 aggga 115
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
||||||||||||||||||| | |||||| ||| ||||||| || ||| ||||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaa 54
Query: 71 tctg 74
||||
Sbjct: 53 tctg 50
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tacttcctccgtttcacaatgtaattcattctagcatt 43
|||| ||||||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcatt 42
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatatagttgttaatgaatct 73
|||||||||| ||||||||||||||| |||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatct 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 87 tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
|||||||||||||| |||| ||||| ||| |||||||||| | |||| | | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 147 gagggagtac 156
|||| |||||
Sbjct: 124 gaggaagtac 133
