miRNEST 2.0, an integrative microRNA resource :: BLAST
>27999_mml-mir-548d:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| |||||||||| || |||||||| ||| ||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccac 70
Query: 79 aattactttt 88
|||| |||||
Sbjct: 71 aatttctttt 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 caagaaccacaattacttttataccaaccaaatac 103
|||||||||||||||||||| ||||||| |||||
Sbjct: 44 caagaaccacaattacttttgcaccaacctaatac 10
>28000_mml-mir-548d:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| |||||||||| || |||||||| ||| ||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccac 70
Query: 79 aattactttt 88
|||| |||||
Sbjct: 71 aatttctttt 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 caagaaccacaattacttttataccaaccaaatac 103
|||||||||||||||||||| ||||||| |||||
Sbjct: 44 caagaaccacaattacttttgcaccaacctaatac 10
>28826_hsa-mir-548f-2:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 4e-10
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 18 atattaggttggtgcagaagtaatcacggttcttgccattagaagtaatg 67
|||||||||||||||| ||||||| || ||| ||||||||| ||||||||
Sbjct: 92 atattaggttggtgcaaaagtaattacagtttttgccattaaaagtaatg 43
>28856_hsa-mir-548y:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| |||||||||| ||| |||||||||
Sbjct: 9 tattaggttggtgcaaaagtaatcactgtttttgccatta 48
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 22 taggttggtgcagaagtaatcacggttcttgcca 55
|||||||||||| |||||||||||||| ||||||
Sbjct: 89 taggttggtgcaaaagtaatcacggtttttgcca 56
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 17 tatattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaacc 76
||||||||||||||||| ||||||| ||| |||||||| |||||||| ||| ||||
Sbjct: 87 tatattaggttggtgcaaaagtaattgtggtgtttgccattgaaagtaatgacaaaaacc 28
Query: 77 acaattacttttataccaaccaaatac 103
| ||||||||| ||||||| |||||
Sbjct: 27 gcgattacttttgcaccaacctaatac 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| |||||||| ||||| ||| |||||
Sbjct: 2 tattaggttggtgcaaaagtaatcgcggtttttgtcatta 41
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 2e-08
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| |||||||| ||||| ||| |||| ||||||| ||| ||| |
Sbjct: 15 tattaggttggtgcaaaagtaatcgcggtttttgtcattgaaagtaatagcaaaaactgc 74
Query: 79 aattacttttataccaacc 97
|||||||||| |||||||
Sbjct: 75 aattacttttgcaccaacc 93
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 9e-08
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaa 80
||||||||||||| ||||||| |||| |||||||| |||||||| ||| |||||||
Sbjct: 85 ttaggttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaaaccacag 26
Query: 81 ttacttttataccaaccaaata 102
|| ||||| ||||||| ||||
Sbjct: 25 tttcttttgcaccaacctaata 4
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 9e-08
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaa 80
||||||||||||| ||||||| |||| |||||||| |||||||| ||| |||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaaaccacag 72
Query: 81 ttacttttataccaaccaaata 102
|| ||||| ||||||| ||||
Sbjct: 73 tttcttttgcaccaacctaata 94
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 9e-08
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaa 80
||||||||||||| ||||||| |||| |||||||| |||||||| ||| |||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaaaccacag 72
Query: 81 ttacttttataccaaccaaata 102
|| ||||| ||||||| ||||
Sbjct: 73 tttcttttgcaccaacctaata 94
>28828_hsa-mir-548f-4:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 9e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| |||| ||||||||| |||||||| ||| |||
Sbjct: 12 tattaggttggtgcaaaagtaatagtggtttttgccattaaaagtaatgacaaaaactgt 71
Query: 79 aattactttt 88
||||||||||
Sbjct: 72 aattactttt 81
>30480_ptr-mir-548i-4:mirbase
Length = 148
Score = 52.0 bits (26), Expect = 9e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| ||| | ||||||||| |||||||| ||| || ||
Sbjct: 25 tattaggttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaaataac 84
Query: 79 aattactttt 88
||||| ||||
Sbjct: 85 aattattttt 94
>28836_hsa-mir-548i-1:mirbase
Length = 149
Score = 50.1 bits (25), Expect = 4e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatg 67
||||||||||||||| ||||||| ||| | ||||||||| ||||||||
Sbjct: 25 tattaggttggtgcaaaagtaattgcggattttgccattaaaagtaatg 73
>30481_ptr-mir-548i-5:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 4e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatg 67
||||||||||||||| ||||||| ||| | ||||||||| ||||||||
Sbjct: 24 tattaggttggtgcaaaagtaattgcggattttgccattaaaagtaatg 72
>30482_ptr-mir-548i-6:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 4e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatg 67
||||||||||||||| ||||||| ||| | ||||||||| ||||||||
Sbjct: 24 tattaggttggtgcaaaagtaattgcggattttgccattaaaagtaatg 72
>28799_hsa-mir-548aa-1:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 17 tatattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaacc 76
||||||||||||||||| ||||||| |||| ||||| || |||||||| ||| ||||
Sbjct: 89 tatattaggttggtgcaaaagtaattgtggtttttgcctgtaaaagtaatggcaaaaacc 30
Query: 77 acaattactttt 88
||| || |||||
Sbjct: 29 acagtttctttt 18
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgccatta 50
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgccatta 50
>28820_hsa-mir-548d-1:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 17 tatattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaacc 76
||||||||||||||||| ||||||| |||| ||||| || |||||||| ||| ||||
Sbjct: 9 tatattaggttggtgcaaaagtaattgtggtttttgcctgtaaaagtaatggcaaaaacc 68
Query: 77 acaattactttt 88
||| || |||||
Sbjct: 69 acagtttctttt 80
>28821_hsa-mir-548d-1:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 17 tatattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaacc 76
||||||||||||||||| ||||||| |||| ||||| || |||||||| ||| ||||
Sbjct: 9 tatattaggttggtgcaaaagtaattgtggtttttgcctgtaaaagtaatggcaaaaacc 68
Query: 77 acaattactttt 88
||| || |||||
Sbjct: 69 acagtttctttt 80
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| |||||||| ||||| ||| |||||
Sbjct: 3 tattaggttggtgcaaaagtaatcgcggtttttgtcatta 42
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| ||||||| ||||| ||| |||||
Sbjct: 104 tattaggttggtgcaaaagtaattgcggtttttgtcatta 65
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 87 tattaggttggtgcaaaagtaattgcggtttttgccatta 48
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgccatta 50
>30478_ptr-mir-548i-2:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| ||| | ||||||||| |||||| | ||| ||| |
Sbjct: 25 tattaggttggtgcaaaagtaattgcggattttgccattaaaagtaacggcaaaaacagc 84
Query: 79 aattacttttatacca 94
||||| |||| |||||
Sbjct: 85 aattatttttgtacca 100
>30479_ptr-mir-548i-3:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaa 80
||||||||||||| ||||||| ||| | ||||||||| |||||||| ||| ||| |||
Sbjct: 26 ttaggttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaaacagcaa 85
Query: 81 ttactttt 88
||| ||||
Sbjct: 86 ttattttt 93
>28825_hsa-mir-548f-1:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 20 attaggttggtgcagaagtaatcacggttcttgccatta 58
|||||||||||||| |||||||||| ||| ||| |||||
Sbjct: 1 attaggttggtgcaaaagtaatcacagtttttgacatta 39
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 18 atattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaacca 77
|||||||||||||| | ||||||| | ||| || |||||| ||||||| ||| |||
Sbjct: 89 atattaggttggtgtaaaagtaattgcagtttttaccattaaaagtaatagcaaaaactg 30
Query: 78 caattacttttataccaaccaaatac 103
||||||||||| ||||||| |||||
Sbjct: 29 caattacttttgcaccaacctaatac 4
>30474_ptr-mir-548f-1:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccat 56
||||||||||||||| ||||||| || ||| |||||||
Sbjct: 80 tattaggttggtgcaaaagtaattacagtttttgccat 43
>27998_mml-mir-548c:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 17 tatattaggttggtgcagaagtaat 41
|||||||| ||||||||||||||||
Sbjct: 94 tatattagtttggtgcagaagtaat 70
>30477_ptr-mir-548i-1:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 9e-05
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatg 67
||||||||||||||| ||||||| ||| | ||||||||| | ||||||
Sbjct: 25 tattaggttggtgcaaaagtaattgcggattttgccattaaacgtaatg 73
>28002_mml-mir-548f:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaa 80
||||||||||||| ||||||| ||| | |||||||| |||||||| | | |||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggattttgccattgaaagtaatggccaaaaccacag 62
Query: 81 ttactttt 88
|| |||||
Sbjct: 63 ttcctttt 70
>28824_hsa-mir-548e:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 23 aggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaatt 82
||||||||||| ||||| || | ||| ||||| ||| ||||||| ||| |||| | |||
Sbjct: 81 aggttggtgcaaaagtagtctcagtttttgcctttaaaagtaatagcaaaaaccgcgatt 22
Query: 83 acttttataccaaccaaata 102
||||| |||||||| ||||
Sbjct: 21 gcttttgtaccaacctaata 2
>28827_hsa-mir-548f-3:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| ||||||| || ||| |||| ||||
Sbjct: 86 tattaggttggtgcaaaagtaattacagtttttgcaatta 47
>30475_ptr-mir-548f-2:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| ||||||| || ||| |||| ||||
Sbjct: 86 tattaggttggtgcaaaagtaattacagtttttgcaatta 47
