miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
|||| |||||||||| ||||||| ||||| ||||||||| ||||||| ||| ||||||
Sbjct: 1 tattcggttggtgcaaaagtaattgcggtttttgccattaaaagtaattgcaaaaaccac 60
Query: 79 aattacttttataccaacc 97
||||||||||| |||||||
Sbjct: 61 aattacttttacaccaacc 79
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 69.9 bits (35), Expect = 7e-12
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 20 attaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccaca 79
|||||||| ||||| ||||||| | |||||||||||||| ||||||| ||||||| ||
Sbjct: 83 attaggttagtgcaaaagtaattgcagttcttgccattagcagtaatggcaagaactgca 24
Query: 80 attacttttataccaaccaaata 102
||||||||| ||||||| ||||
Sbjct: 23 attacttttgcaccaacctaata 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| | ||||||||||||| ||||| ||||||| |
Sbjct: 1 tattaggttggtgcaaaagtaattgcagttcttgccattactgctaatggcaagaactgc 60
Query: 79 aattactttt 88
||||||||||
Sbjct: 61 aattactttt 70
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 69.9 bits (35), Expect = 7e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| |||| ||| |||| ||||||||| |||||||| ||| |||| |
Sbjct: 1 tattaggttggtgcaaaagttatcgtggtttttgccattaaaagtaatgacaaaaaccgc 60
Query: 79 aattacttttataccaacc 97
|||||||||| |||||||
Sbjct: 61 aattacttttgcaccaacc 79
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 26 ttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaattact 85
|||||||| ||||||| ||||| ||||||||| |||||||| ||| |||| ||||||||
Sbjct: 8 ttggtgcaaaagtaattgcggtttttgccattaaaagtaatggcaaaaaccgcaattact 67
Query: 86 tttataccaacca 98
||| ||||||||
Sbjct: 68 tttgcaccaacca 80
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| | |||| ||||||| | ||| |||| ||| |||| |
Sbjct: 1 tattaggttggtgcaaaagtaattatggtttttgccatcaaaagcaatggcaaaaaccgc 60
Query: 79 aattacttttataccaa 95
|||||||||| ||||||
Sbjct: 61 aattacttttgtaccaa 77
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaa 80
||||||||| ||| ||||||| ||||| |||||||| |||||||| ||| ||||||||
Sbjct: 3 ttaggttggagcaaaagtaattgcggtttttgccattgaaagtaatggcaaaaaccacaa 62
Query: 81 ttactttt 88
||||||||
Sbjct: 63 ttactttt 70
>RF01061;mir-548;AADC01054028.1/147-64 9606:Homo sapiens (human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||| |||| ||| ||||||||| |||||||| ||| || |||
Sbjct: 84 tattaggttggtgcaaaagcaatcgtagtttttgccattaaaagtaatggcaaaaagcac 25
Query: 79 aattacttttataccaacc 97
|||||||||| |||||||
Sbjct: 24 aattacttttgcaccaacc 6
>RF01061;mir-548;AADB02016093.1/179805-179888 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatt 57
||||||||||||||| |||||||||||||| ||||||||
Sbjct: 84 tattaggttggtgcaaaagtaatcacggtttttgccatt 46
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||| |||||||| ||| | |||||||||
Sbjct: 3 ttaggttggtgcaaaagtaatcgcgggttttgccatta 40
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 20 attaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccaca 79
|||||||||||||| ||||||| |||||||||||||| |||||| | ||| |||| ||
Sbjct: 2 attaggttggtgcaaaagtaattgcggttcttgccattgaaagtaacggcaaaaaccgca 61
Query: 80 attacttttatacca 94
| ||||||| |||||
Sbjct: 62 actacttttgtacca 76
>RF01061;mir-548;CABD01007255.1/6013-6096 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||| ||||||||| ||||||| |||||| |||| |||| | ||||| ||| ||||||
Sbjct: 84 tattaagttggtgcaaaagtaattacggtttttgctattatatttaatggcaaaaaccac 25
Query: 79 aattactttt 88
||||||||||
Sbjct: 24 aattactttt 15
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| |||||||||| || |||||||| ||| ||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccac 60
Query: 79 aattactttt 88
|||| |||||
Sbjct: 61 aatttctttt 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 69 caagaaccacaattacttttataccaaccaaata 102
|||||||||||||||||||| ||||||| ||||
Sbjct: 34 caagaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AADB02015244.1/579799-579882 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 22 taggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaat 81
|||||||||||| |||||||| | || |||||||| |||||||| ||| || ||||||
Sbjct: 4 taggttggtgcaaaagtaatcgtgcttgttgccattgaaagtaatggcaacaagcacaat 63
Query: 82 tacttttataccaaccaaata 102
||||||| ||||||| ||||
Sbjct: 64 tacttttgcaccaacccaata 84
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta (rhesus
monkey)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 22 taggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaat 81
|||| ||||||| ||||||| ||||| |||||||| ||| ||||| ||| |||| ||||
Sbjct: 4 taggctggtgcaaaagtaattgcggtttttgccattggaaataatggcaaaaaccgcaat 63
Query: 82 tacttttataccaaccaaata 102
||||||| || ||||| ||||
Sbjct: 64 tacttttgtatcaacctaata 84
>RF01061;mir-548;AACZ02112867.1/29891-29976 9598:Pan troglodytes
(chimpanzee)
Length = 86
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| |||||||||||||| |||| ||||
Sbjct: 1 tattaggttggtgcaaaagtaatcacggtttttgctatta 40
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatt 57
|||||||| ||||| |||||||||||||| ||||||||
Sbjct: 86 tattaggtcagtgcaaaagtaatcacggtttttgccatt 48
>RF01061;mir-548;AADB02016072.1/820085-820002 9606:Homo sapiens
(human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||||||| |||||||||| ||| |||||||||
Sbjct: 84 tattaggttggtgcaaaagtaatcactgtttttgccatta 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 22 taggttggtgcagaagtaatcacggttcttgcca 55
|||||||||||| |||||||||||||| ||||||
Sbjct: 4 taggttggtgcaaaagtaatcacggtttttgcca 37
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 51 tgccattagaagtaatgccaagaaccacaattacttttataccaaccaaata 102
|||||||| |||||||| ||| |||||||||||||||| ||||||| ||||
Sbjct: 52 tgccattaaaagtaatggcaaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AL157365.19/15987-15904 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| | ||||||| |||| |||||||| |||||||| ||| | ||||
Sbjct: 1 tattaggttggtgcaaatgtaatcatggtttttgccattgaaagtaatggcaaaagccac 60
Query: 79 aattacttttataccaaccaaata 102
||||| ||| ||||||| ||||
Sbjct: 61 gattacatttgcaccaacctaata 84
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| ||| | ||||||||| |||||||| ||| ||| |
Sbjct: 1 tattaggttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaaacagc 60
Query: 79 aattacttttatacca 94
||||| |||| |||||
Sbjct: 61 aattatttttgtacca 76
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| |||||| ||||| ||||||| | | |||| ||| ||||||
Sbjct: 84 tattaggttggtgcaaaagtaagtgcggtttttgccatcacttgcaatggcaaaaaccac 25
Query: 79 aattacttttataccaaccaaata 102
|||||||||| |||||||| ||||
Sbjct: 24 aattacttttgtaccaacctaata 1
>RF01061;mir-548;AADC01066814.1/148075-148158 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||||| || || ||||| |||||||| |||||||| ||| ||||||
Sbjct: 1 tattaggttggtgcagatgtgattgcggtttttgccattgaaagtaatgacaaaaaccac 60
Query: 79 aat 81
|||
Sbjct: 61 aat 63
>RF01061;mir-548;AC099678.2/65387-65470 9606:Homo sapiens (human)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| |||| |||||||| |||||||| ||| ||||||
Sbjct: 1 tattaggttggtgcacaagtaattgtggtttttgccatttaaagtaatggcaaaaaccac 60
Query: 79 aat 81
|||
Sbjct: 61 aat 63
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaa 65
||||||||||||||| ||||||| ||||| ||||||||| ||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgccattaaaagtaa 47
>RF01061;mir-548;ABBV01001495.1/1250-1333 447454:candidate
division TM7 single-cell isolate TM7a
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 20 attaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccaca 79
|||||||||||||| ||||||| | ||| ||||||||| |||||||| ||| | || ||
Sbjct: 2 attaggttggtgcataagtaattgcagtttttgccattaaaagtaatggcaaaacccgca 61
Query: 80 attactt 86
|||||||
Sbjct: 62 attactt 68
>RF01061;mir-548;AC191392.1/146896-146813 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 50 ttgccattagaagtaatgccaagaaccacaattacttt 87
||||||||| |||||||| ||||| |||||||||||||
Sbjct: 32 ttgccattaaaagtaatgacaagacccacaattacttt 69
>RF01061;mir-548;AACZ02061421.1/862-945 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 51 tgccattagaagtaatgccaagaaccacaattactttt 88
|||||||| |||||||| ||| ||||||||||||||||
Sbjct: 33 tgccattaaaagtaatggcaaaaaccacaattactttt 70
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||| ||| | ||| ||||||||| || |||| ||| ||||||
Sbjct: 84 tattaggttggtgcaaaagcaattgcagtttttgccattacaatcaatgacaaaaaccac 25
Query: 79 aattactttt 88
||||||||||
Sbjct: 24 aattactttt 15
>RF01061;mir-548;AC117179.4/116901-116818 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 7e-06
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 21 ttaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaa 80
||||||||||||| | ||||| || || |||||||| |||||||| ||| ||||||||
Sbjct: 82 ttaggttggtgcaaacgtaattgcgatttttgccattgaaagtaatggcaaaaaccacaa 23
Query: 81 ttacttttataccaacc 97
|||| ||| |||||||
Sbjct: 22 ttacgtttgcaccaacc 6
>RF01061;mir-548;AANU01230369.1/6404-6321 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 50 ttgccattagaagtaatgccaagaaccacaattacttttataccaaccaaata 102
||||||||| |||||||| ||| ||||||||||||||| ||||||| ||||
Sbjct: 53 ttgccattaaaagtaatgacaaagaccacaattacttttgcaccaacccaata 1
>RF01061;mir-548;ABGA01173437.1/27298-27381 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatta 58
||||||||||| ||| |||||||||| ||| |||||||||
Sbjct: 84 tattaggttggcgcaaaagtaatcacagtttttgccatta 45
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 50 ttgccattagaagtaatgccaagaaccacaattacttttataccaacc 97
||||||||| |||||||||||| ||| ||||||||||| |||||||
Sbjct: 32 ttgccattaaaagtaatgccaaaaactgcaattacttttgcaccaacc 79
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| |||| |||||||| ||||||| || | |||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttttgccattgaaagtaatagtaaaagccat 60
Query: 79 aattacttttataccaaccaaata 102
|||||||||| ||||||||||||
Sbjct: 61 aattacttttgcaccaaccaaata 84
>RF01061;mir-548;AC011709.11/112131-112214 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 23 aggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaatt 82
||||||||||| | ||||| ||||| ||||||||| ||||||| ||| ||||||| ||
Sbjct: 5 aggttggtgcaaatgtaatggcggtttttgccattaaaagtaattgcaaaaaccacagtt 64
Query: 83 acttttataccaaccaaata 102
|| ||| ||||||| ||||
Sbjct: 65 acatttgcaccaacctaata 84
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
|||||||||||||| ||||||| ||||| | |||||| |||||||| ||| |||| |
Sbjct: 1 tattaggttggtgctaaagtaattgcggttttggccattgaaagtaatgtcaaaaaccgc 60
Query: 79 aattactt 86
||||||||
Sbjct: 61 aattactt 68
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| |||| || | ||| ||||||||| |||||| ||| ||||||
Sbjct: 84 tattaggttggtgcaaaagtgattgcagtttttgccattaaaagtaacagcaaaaaccac 25
Query: 79 aattacttttataccaaccaaata 102
||| |||||| ||||||| ||||
Sbjct: 24 aatcacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| |||||| | ||| ||||||||| |||| ||| ||| || ||
Sbjct: 1 tattaggttggtgcaaaagtaagtgctgtttttgccattaaaagtcatggcaaaaataac 60
Query: 79 aattacttttataccaaccaaata 102
|||||||||| ||||||| ||||
Sbjct: 61 aattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||| || |||| ||||||| | ||| ||||||||| |||||||| ||| | || |
Sbjct: 84 tattaggctgatgcaaaagtaattgcagtttttgccattaaaagtaatgtcaaaacccgc 25
Query: 79 aattacttttataccaaccaaata 102
|||||||||| ||||||| ||||
Sbjct: 24 aattacttttgcaccaacctaata 1
>RF01061;mir-548;AC104441.2/115021-115102 9606:Homo sapiens
(human)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaat 41
|||||||||||||||||||||||
Sbjct: 1 tattaggttggtgcagaagtaat 23
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaat 41
|||||||||||||||||||||||
Sbjct: 82 tattaggttggtgcagaagtaat 60
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 22 taggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaat 81
||||||| |||| ||||||| ||||| |||||||| ||| |||| ||| |||| ||||
Sbjct: 4 taggttgttgcaaaagtaattgcggtttttgccattcaaagcaatgacaaaaaccgcaat 63
Query: 82 tactttt 88
|||||||
Sbjct: 64 tactttt 70
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatt 57
||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 84 tattaggttggtgcaaaagtaattgcggtttttgccatt 46
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccatt 57
||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgccatt 39
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 52 gccattagaagtaatgccaagaaccacaattacttttataccaaccaaata 102
||||||| |||||||| | | |||||||||||||||| ||||||| ||||
Sbjct: 51 gccattaaaagtaatggcgaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AADA01051643.1/6626-6709 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| |||| || ||| |||||||| |||||||| ||| |||||
Sbjct: 1 tattaggttggtgcaaaagtgattgtagtttttgccattgaaagtaatggcaatgaccac 60
Query: 79 aattactttt 88
||||||||||
Sbjct: 61 aattactttt 70
>RF01061;mir-548;AADC01142453.1/7445-7528 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||| ||||||| ||||||| | ||| ||||| | |||||||| |||||||| |
Sbjct: 1 tattaggctggtgcaaaagtaattgcagtttctgccactgaaagtaatggcaagaaccgc 60
Query: 79 aattactttt 88
||||||||||
Sbjct: 61 aattactttt 70
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 27 tggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaattactt 86
||||||| ||||||| ||||| ||||||||| || |||| ||| |||| |||||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgccattaaaaacaatggcaaaaaccgcaattactt 68
Query: 87 tt 88
||
Sbjct: 69 tt 70
>RF01061;mir-548;AADB02001154.1/69220-69137 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaacc 76
||||||||||||||| ||||||| ||| | |||||||| |||||||| ||| ||||
Sbjct: 1 tattaggttggtgcaaaagtaatggcgggttttgccattgaaagtaatggcaaaaacc 58
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
|||||| |||||||| ||||||| || ||| ||||||| | ||||| ||| ||||||
Sbjct: 84 tattagattggtgcaaaagtaattacagtttttgccatcatttttaatggcaaaaaccac 25
Query: 79 aattactttt 88
||||||||||
Sbjct: 24 aattactttt 15
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||||||| ||||||| ||||| |||||| || || |||||| || | |
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgccactacttttagtgccaaaaatcgc 60
Query: 79 aattacttttataccaac 96
|||||||||| |||||||
Sbjct: 61 aattacttttgtaccaac 78
>RF01061;mir-548;AANU01274414.1/2282-2365 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 19 tattaggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccac 78
||||||||||| ||| ||||||| || || ||| ||||| |||||||| ||| ||||||
Sbjct: 1 tattaggttggcgcaaaagtaattgcgatttttgtcattaaaagtaatggcaaaaaccac 60
Query: 79 aattactttt 88
||| |||||
Sbjct: 61 gattgctttt 70
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 23 aggttggtgcagaagtaatcacggttcttgccattagaagtaatgccaagaaccacaatt 82
||||||||||| ||||||| ||||| ||| |||| |||||||| ||| ||| |||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtttttgtcattgaaagtaatggcaaagaccgcaatt 64
Query: 83 actttt 88
||||||
Sbjct: 65 actttt 70
