miRNEST 2.0, an integrative microRNA resource :: BLAST
>27792_mml-mir-196b:mirbase
Length = 75
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 71
>28509_hsa-mir-196b:mirbase
Length = 84
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 71
>30273_ptr-mir-196b:mirbase
Length = 83
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 71
>30889_ppy-mir-196b:mirbase
Length = 84
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 71
>31917_mmu-mir-196b:mirbase
Length = 85
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 72
>32784_rno-mir-196b:mirbase
Length = 85
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 72
>33270_bta-mir-196b:mirbase
Length = 85
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 72
>34027_ssc-mir-196b:mirbase
Length = 80
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 70
>34028_ssc-mir-196b:mirbase
Length = 80
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 70
>26754_cfa-mir-196b:mirbase
Length = 58
Score = 113 bits (57), Expect = 1e-26
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 3 taggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 57
>27081_eca-mir-196b:mirbase
Length = 84
Score = 109 bits (55), Expect = 2e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttc 59
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13 tttaggtagtttcctgttgttgggatccagctttctctcgacagcacgacactgccttc 71
>31526_oan-mir-196b:mirbase
Length = 85
Score = 95.6 bits (48), Expect = 3e-21
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttggga-tccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 14 tttaggtagtttcctgttgttggggctccacctttctctcgacagcacgacactgccttc 73
>27416_mdo-mir-196b:mirbase
Length = 86
Score = 87.7 bits (44), Expect = 7e-19
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttggga-tccacctttctctcgacagcacgacactgccttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 14 tttaggtagtttcctgttgttggggctccacctttctctcgacagcacgatactgccttc 73
>25986_gga-mir-196-2:mirbase
Length = 94
Score = 69.9 bits (35), Expect = 2e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttggga-tccacctttctctcgacagcacgacactgcctt 58
||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct: 14 tttaggtagtttcatgttgttggggctccacctttctctctacagcacgaaactgcctt 72
>25817_xtr-mir-196b:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 2e-06
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttggg-atccacctttctctcgacagcacgacactgcctt 58
|||||||||||| |||||||||| || |||||||||||| ||| || || ||||||||
Sbjct: 14 tttaggtagttttatgttgttgggcattcacctttctctctacaacaagaaactgcctt 72
>25816_xtr-mir-196a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggat 26
||||||||||||| ||||||||||||
Sbjct: 23 tttaggtagtttcatgttgttgggat 48
>25987_gga-mir-196-3:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggat 26
||||||||||||| ||||||||||||
Sbjct: 22 tttaggtagtttcatgttgttgggat 47
>34347_dre-mir-196a-1:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggat 26
||||||||||||| ||||||||||||
Sbjct: 19 tttaggtagtttcatgttgttgggat 44
>34348_dre-mir-196a-2:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggat 26
||||||||||||| ||||||||||||
Sbjct: 9 tttaggtagtttcatgttgttgggat 34
>27515_age-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>27580_lla-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>27791_mml-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>28324_ggo-mir-196-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>28508_hsa-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30112_ppa-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30272_ptr-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30888_ppy-mir-196-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>31525_oan-mir-196a:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 28 ttaggtagtttcatgttgttgggat 52
>31916_mmu-mir-196a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 15 ttaggtagtttcatgttgttgggat 39
>32783_rno-mir-196a:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>33269_bta-mir-196a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 15 ttaggtagtttcatgttgttgggat 39
>34026_ssc-mir-196a:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttgggat 26
|||||||||||| ||||||||||||
Sbjct: 21 ttaggtagtttcatgttgttgggat 45
>34623_fru-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 4e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatcca 29
||||||||||||| |||||||||| ||||
Sbjct: 9 tttaggtagtttcatgttgttggggtcca 37
>34770_tni-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 4e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttgggatcca 29
||||||||||||| |||||||||| ||||
Sbjct: 9 tttaggtagtttcatgttgttggggtcca 37
>26753_cfa-mir-196a-2:mirbase
Length = 59
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 taggtagtttcctgttgttgggat 26
||||||||||| ||||||||||||
Sbjct: 1 taggtagtttcatgttgttgggat 24
>34622_fru-mir-196a-1:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttggg 24
||||||||||||| ||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggg 37
>34769_tni-mir-196a-1:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tttaggtagtttcctgttgttggg 24
||||||||||||| ||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggg 37
>25985_gga-mir-196-1:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 23 ttaggtagtttcatgttgttggg 45
>26752_cfa-mir-196a-1:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 14 ttaggtagtttcatgttgttggg 36
>27080_eca-mir-196a:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 6 ttaggtagtttcatgttgttggg 28
>27790_mml-mir-196a-1:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 6 ttaggtagtttcatgttgttggg 28
>28323_ggo-mir-196-1:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 6 ttaggtagtttcatgttgttggg 28
>28507_hsa-mir-196a-1:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 6 ttaggtagtttcatgttgttggg 28
>30271_ptr-mir-196a-1:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 5 ttaggtagtttcatgttgttggg 27
>30887_ppy-mir-196-1:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 6 ttaggtagtttcatgttgttggg 28
>33268_bta-mir-196a-1:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 ttaggtagtttcctgttgttggg 24
|||||||||||| ||||||||||
Sbjct: 23 ttaggtagtttcatgttgttggg 45
